; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041326 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041326
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr13:15788727..15789419
RNA-Seq ExpressionLag0041326
SyntenyLag0041326
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040811.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.9e-4251.77Show/hide
Query:  KGNNKHQRK----KDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF-HKKKKENLATSYC------------IDVEEVDNSKKGEQRTSVFDRIKPQTTR
        KGN  H++K    K   K +P + + + F QP+Q + L + F ++F     KE L  + C               EEVDNS + +QRTSVFDRIKP TTR
Subjt:  KGNNKHQRK----KDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF-HKKKKENLATSYC------------IDVEEVDNSKKGEQRTSVFDRIKPQTTR

Query:  PSVFQRMSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL
         SVFQR+S+   EEENQC  ST TR SAF+ LS+STSKK +PSTS FDRLK+ +DQ +R+M +L+VK F E N D K+HS +PSRMKRK SV INTEGSL
Subjt:  PSVFQRMSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL

Query:  KVKPNLIILTNPANGGSDQDHDKDKS
         VKP  II TNP N G ++  D++KS
Subjt:  KVKPNLIILTNPANGGSDQDHDKDKS

KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.6e-4351.33Show/hide
Query:  KGNNKHQRK----KDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF---HKKKKENLATSYCIDV----------EEVDNSKKGEQRTSVFDRIKPQTTR
        KGN  H++K    K   K +P + + +   QP+Q + L + F ++F   H ++   + T +   +          EEVDNS + +QRTSVFDRIKP TTR
Subjt:  KGNNKHQRK----KDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF---HKKKKENLATSYCIDV----------EEVDNSKKGEQRTSVFDRIKPQTTR

Query:  PSVFQRMSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL
         SVFQR+SMA  EEENQC  ST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+HS +PSRMKRK SV INTEGSL
Subjt:  PSVFQRMSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL

Query:  KVKPNLIILTNPANGGSDQDHDKDKS
         VKP  II TNP N G ++  D++KS
Subjt:  KVKPNLIILTNPANGGSDQDHDKDKS

KAA0050736.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.2e-4450.66Show/hide
Query:  KGNNKHQRK----KDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTFHKKKKENLA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPQTTR
        KGN  H++K    K   K +P +++ +KF QP++ + L + F ++F +   E +       T+  ++V       EEVDNS + +QRTSVFDRIKP TTR
Subjt:  KGNNKHQRK----KDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTFHKKKKENLA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPQTTR

Query:  PSVFQRMSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL
         SVFQR+SMA  EEENQC +ST+TR SAF+RLS+S SKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K++S +PSR+KRK S+ INTEGSL
Subjt:  PSVFQRMSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL

Query:  KVKPNLIILTNPANGGSDQDHDKDKSF
         VKP  II TNP N G ++  D++K F
Subjt:  KVKPNLIILTNPANGGSDQDHDKDKSF

KAA0055462.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.6e-4351.33Show/hide
Query:  KGNNKHQRK--KDPKKLQPKRKRSKK--FSQPQQLVMLNKSFSKTFHKKKKENLA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPQTTR
        KGN  H++K  ++ K  +PK  + K+  F QP++ + L +  S++F +   E +       T+  ++V       EEVDNS + +QRTSVFDRIKP TTR
Subjt:  KGNNKHQRK--KDPKKLQPKRKRSKK--FSQPQQLVMLNKSFSKTFHKKKKENLA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPQTTR

Query:  PSVFQRMSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL
         SVFQR+SMA  EE+NQC  ST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+H+ +PSRMKRK SV INTEGSL
Subjt:  PSVFQRMSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL

Query:  KVKPNLIILTNPANGGSDQDHDKDKS
         VKP  II TNP N G ++  D++KS
Subjt:  KVKPNLIILTNPANGGSDQDHDKDKS

TYK08944.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.6e-4351.33Show/hide
Query:  KGNNKHQRK--KDPKKLQPKRKRSKK--FSQPQQLVMLNKSFSKTFHKKKKENLA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPQTTR
        KGN  H++K  ++ K  +PK  + K+  F QP++ + L +  S++F +   E +       T+  ++V       EEVDNS + +QRTSVFDRIKP TTR
Subjt:  KGNNKHQRK--KDPKKLQPKRKRSKK--FSQPQQLVMLNKSFSKTFHKKKKENLA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPQTTR

Query:  PSVFQRMSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL
         SVFQR+SMA  EE+NQC  ST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+H+ +PSRMKRK SV INTEGSL
Subjt:  PSVFQRMSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL

Query:  KVKPNLIILTNPANGGSDQDHDKDKS
         VKP  II TNP N G ++  D++KS
Subjt:  KVKPNLIILTNPANGGSDQDHDKDKS

TrEMBL top hitse value%identityAlignment
A0A5A7TGM1 Retrotransposon gag protein1.9e-4251.77Show/hide
Query:  KGNNKHQRK----KDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF-HKKKKENLATSYC------------IDVEEVDNSKKGEQRTSVFDRIKPQTTR
        KGN  H++K    K   K +P + + + F QP+Q + L + F ++F     KE L  + C               EEVDNS + +QRTSVFDRIKP TTR
Subjt:  KGNNKHQRK----KDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF-HKKKKENLATSYC------------IDVEEVDNSKKGEQRTSVFDRIKPQTTR

Query:  PSVFQRMSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL
         SVFQR+S+   EEENQC  ST TR SAF+ LS+STSKK +PSTS FDRLK+ +DQ +R+M +L+VK F E N D K+HS +PSRMKRK SV INTEGSL
Subjt:  PSVFQRMSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL

Query:  KVKPNLIILTNPANGGSDQDHDKDKS
         VKP  II TNP N G ++  D++KS
Subjt:  KVKPNLIILTNPANGGSDQDHDKDKS

A0A5A7TQ06 Retrotransposon gag protein2.2e-4351.33Show/hide
Query:  KGNNKHQRK----KDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF---HKKKKENLATSYCIDV----------EEVDNSKKGEQRTSVFDRIKPQTTR
        KGN  H++K    K   K +P + + +   QP+Q + L + F ++F   H ++   + T +   +          EEVDNS + +QRTSVFDRIKP TTR
Subjt:  KGNNKHQRK----KDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF---HKKKKENLATSYCIDV----------EEVDNSKKGEQRTSVFDRIKPQTTR

Query:  PSVFQRMSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL
         SVFQR+SMA  EEENQC  ST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+HS +PSRMKRK SV INTEGSL
Subjt:  PSVFQRMSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL

Query:  KVKPNLIILTNPANGGSDQDHDKDKS
         VKP  II TNP N G ++  D++KS
Subjt:  KVKPNLIILTNPANGGSDQDHDKDKS

A0A5A7U974 Retrotransposon gag protein3.5e-4450.66Show/hide
Query:  KGNNKHQRK----KDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTFHKKKKENLA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPQTTR
        KGN  H++K    K   K +P +++ +KF QP++ + L + F ++F +   E +       T+  ++V       EEVDNS + +QRTSVFDRIKP TTR
Subjt:  KGNNKHQRK----KDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTFHKKKKENLA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPQTTR

Query:  PSVFQRMSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL
         SVFQR+SMA  EEENQC +ST+TR SAF+RLS+S SKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K++S +PSR+KRK S+ INTEGSL
Subjt:  PSVFQRMSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL

Query:  KVKPNLIILTNPANGGSDQDHDKDKSF
         VKP  II TNP N G ++  D++K F
Subjt:  KVKPNLIILTNPANGGSDQDHDKDKSF

A0A5A7UI09 Retrotransposon gag protein1.7e-4351.33Show/hide
Query:  KGNNKHQRK--KDPKKLQPKRKRSKK--FSQPQQLVMLNKSFSKTFHKKKKENLA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPQTTR
        KGN  H++K  ++ K  +PK  + K+  F QP++ + L +  S++F +   E +       T+  ++V       EEVDNS + +QRTSVFDRIKP TTR
Subjt:  KGNNKHQRK--KDPKKLQPKRKRSKK--FSQPQQLVMLNKSFSKTFHKKKKENLA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPQTTR

Query:  PSVFQRMSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL
         SVFQR+SMA  EE+NQC  ST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+H+ +PSRMKRK SV INTEGSL
Subjt:  PSVFQRMSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL

Query:  KVKPNLIILTNPANGGSDQDHDKDKS
         VKP  II TNP N G ++  D++KS
Subjt:  KVKPNLIILTNPANGGSDQDHDKDKS

A0A5D3CCI8 Retrotransposon gag protein1.7e-4351.33Show/hide
Query:  KGNNKHQRK--KDPKKLQPKRKRSKK--FSQPQQLVMLNKSFSKTFHKKKKENLA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPQTTR
        KGN  H++K  ++ K  +PK  + K+  F QP++ + L +  S++F +   E +       T+  ++V       EEVDNS + +QRTSVFDRIKP TTR
Subjt:  KGNNKHQRK--KDPKKLQPKRKRSKK--FSQPQQLVMLNKSFSKTFHKKKKENLA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPQTTR

Query:  PSVFQRMSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL
         SVFQR+SMA  EE+NQC  ST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+H+ +PSRMKRK SV INTEGSL
Subjt:  PSVFQRMSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL

Query:  KVKPNLIILTNPANGGSDQDHDKDKS
         VKP  II TNP N G ++  D++KS
Subjt:  KVKPNLIILTNPANGGSDQDHDKDKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGAAAAATTGAGCTCGACCTTGATGAAGTAACTCAATCAAATCTTGCTACAATCAAAGGAAATAACAAACATCAAAGAAAGAAGGATCCTAAGAAACTTCAACC
CAAGAGGAAGAGAAGTAAAAAGTTTTCTCAACCTCAACAACTGGTGATGTTGAATAAATCCTTCTCCAAAACTTTCCACAAAAAGAAAAAAGAGAACCTTGCAACTTCCT
ACTGCATCGACGTAGAAGAAGTTGACAATTCCAAGAAGGGTGAACAAAGGACCTCTGTCTTCGATCGCATCAAGCCTCAAACTACTCGTCCTTCAGTATTCCAAAGAATG
AGTATGGCCGCGACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCGAC
ATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCGATGAAGTAAACAGTGACAAGAAGCTTCATAGTA
GCATCCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAGCCAAATCTCATTATCTTGACCAATCCTGCAAATGGAGGATCT
GATCAAGACCATGACAAAGATAAGAGCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGAAAAATTGAGCTCGACCTTGATGAAGTAACTCAATCAAATCTTGCTACAATCAAAGGAAATAACAAACATCAAAGAAAGAAGGATCCTAAGAAACTTCAACC
CAAGAGGAAGAGAAGTAAAAAGTTTTCTCAACCTCAACAACTGGTGATGTTGAATAAATCCTTCTCCAAAACTTTCCACAAAAAGAAAAAAGAGAACCTTGCAACTTCCT
ACTGCATCGACGTAGAAGAAGTTGACAATTCCAAGAAGGGTGAACAAAGGACCTCTGTCTTCGATCGCATCAAGCCTCAAACTACTCGTCCTTCAGTATTCCAAAGAATG
AGTATGGCCGCGACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCGAC
ATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCGATGAAGTAAACAGTGACAAGAAGCTTCATAGTA
GCATCCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAGCCAAATCTCATTATCTTGACCAATCCTGCAAATGGAGGATCT
GATCAAGACCATGACAAAGATAAGAGCTTTTAA
Protein sequenceShow/hide protein sequence
MERKIELDLDEVTQSNLATIKGNNKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTFHKKKKENLATSYCIDVEEVDNSKKGEQRTSVFDRIKPQTTRPSVFQRM
SMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANGGS
DQDHDKDKSF