; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041332 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041332
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr13:15839409..15841117
RNA-Seq ExpressionLag0041332
SyntenyLag0041332
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0050789 - regulation of biological process (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0004519 - endonuclease activity (molecular function)
InterPro domainsIPR020847 - AP endonuclease 1, binding site
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN68838.1 hypothetical protein VITISV_030956 [Vitis vinifera]5.4e-9039.7Show/hide
Query:  GLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWITRVY
        GLG++ KR ++KD L  E PD+V+ QE+K ++ DRR V SVW++R+  W AL A G+  GIL++W    +   + +LG+FS++++   +G    W++ VY
Subjt:  GLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWITRVY

Query:  GTCSSSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWTRTF
        G  +S+ RK  + EL D+AG     WC+  DFNV+R   ++L   R+  S + F+ FIS  +LID+PL +  FTWS         RLDRF  S +W +TF
Subjt:  GTCSSSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWTRTF

Query:  KDLRLDRLHRIASDHFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQRIDQ
               L R  SDH+PI L T   KWGP+PFRFENMWL +P FK+N   WW+E    GW G +FM K++ +K  ++ WNK   G L  +K  IL  +  
Subjt:  KDLRLDRLHRIASDHFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQRIDQ

Query:  LDSLEEQGSIQPQEIAERSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNLCT
         DSLE++G +  + +A+R+  K  L E+ + ++    QK ++KW++EGD N+ FFH+  +  +++ FI  LE+++G+++++   I+EEIL+++  L T
Subjt:  LDSLEEQGSIQPQEIAERSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNLCT

RVW32700.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.5e-8740.1Show/hide
Query:  DLEGLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWIT
        ++ GLG+  KR +IKD L  E PD+V++QE+K +K DRRLV SVW+ R+  W+ L A G+  GIL +W    +   + VLG+FSI+++    G    WI+
Subjt:  DLEGLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWIT

Query:  RVYGTCSSSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWT
         VYG  S S RK F+ ELYD+ G     WC+  DFNV+R   ++L   R+  S R F+ FIS  +L+D PL N  FTWS         RLDRF  S +W 
Subjt:  RVYGTCSSSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWT

Query:  RTFKDLRLDRLHRIASDHFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQR
        + F     + L R  SDH+PI+L T    WGP+PFRFENMWL +P FK+N  +WW+     GW G +FM +++ +K  ++ WNK   G L +KK  IL+ 
Subjt:  RTFKDLRLDRLHRIASDHFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQR

Query:  IDQLDSLEEQGSIQPQEIAERSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNL
        +  LD++E+ G +  + + +R+  K  L E+ + ++    QK ++KW++EGD N+ FFH+  +  +++ +I +LE++ G +L++   I EEIL ++  L
Subjt:  IDQLDSLEEQGSIQPQEIAERSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNL

RVW70235.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]5.4e-9039.7Show/hide
Query:  GLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWITRVY
        GLG++ KR ++KD L  E PD+V+ QE+K ++ DRR V SVW++R+  W AL A G+  GIL++W    +   + +LG+FS++++   +G    W++ VY
Subjt:  GLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWITRVY

Query:  GTCSSSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWTRTF
        G  +S+ RK  + EL D+AG     WC+  DFNV+R   ++L   R+  S + F+ FIS  +LID+PL +  FTWS         RLDRF  S +W +TF
Subjt:  GTCSSSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWTRTF

Query:  KDLRLDRLHRIASDHFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQRIDQ
               L R  SDH+PI L T   KWGP+PFRFENMWL +P FK+N   WW+E    GW G +FM K++ +K  ++ WNK   G L  +K  IL  +  
Subjt:  KDLRLDRLHRIASDHFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQRIDQ

Query:  LDSLEEQGSIQPQEIAERSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNLCT
         DSLE++G +  + +A+R+  K  L E+ + ++    QK ++KW++EGD N+ FFH+  +  +++ FI  LE+++G+++++   I+EEIL+++  L T
Subjt:  LDSLEEQGSIQPQEIAERSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNLCT

RVX13544.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.6e-8939.45Show/hide
Query:  GLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWITRVY
        GLG++ KR ++KD L  E PD+V+ QE+K ++ DRR V SVW++R+  W  L A G+  GIL++W    +   + +LG+FS++++   +G    W++ VY
Subjt:  GLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWITRVY

Query:  GTCSSSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWTRTF
        G  +S+ RK  + EL D+AG     WC+  DFNV+R   ++L   R+  S + F+ FIS  +LID+PL +  FTWS         RLDRF  S +W +TF
Subjt:  GTCSSSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWTRTF

Query:  KDLRLDRLHRIASDHFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQRIDQ
               L R  SDH+PI L T   KWGP+PFRFENMWL +P FK+N   WW+E    GW G +FM K++ +K  ++ WNK   G L  +K  IL  +  
Subjt:  KDLRLDRLHRIASDHFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQRIDQ

Query:  LDSLEEQGSIQPQEIAERSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNLCT
         DSLE++G +  + +A+R+  K  L E+ + ++    QK ++KW++EGD N+ FFH+  +  +++ FI  LE+++G+++++   I+EEIL+++  L T
Subjt:  LDSLEEQGSIQPQEIAERSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNLCT

RVX20328.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]4.3e-8740.1Show/hide
Query:  DLEGLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWIT
        ++ GLG+  KR  IKD L  E PD+V++QE+K +K D+RLV SVW+ R+  W+ L A G+  GIL +W    +   + VLG+FSI+++ V  G    WI+
Subjt:  DLEGLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWIT

Query:  RVYGTCSSSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWT
         VYG  S S RK F+ ELYD+ G     WC+  DFNV+R   ++L   R+  S R F+ FIS  +L+D PL N  FTWS         RLDRF  S +W 
Subjt:  RVYGTCSSSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWT

Query:  RTFKDLRLDRLHRIASDHFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQR
        + F     + L R  SDH+PI+L T    WGP+PFRFENMWL +P FK+N  +WW+     GW G +FM +++ +K   + WNK   G L +KK  IL+ 
Subjt:  RTFKDLRLDRLHRIASDHFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQR

Query:  IDQLDSLEEQGSIQPQEIAERSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNL
        +  LD++E+ G +  + + +R+  K  L E+ + ++    QK ++KW++EGD N+ FFH+  +  +++ +I +LE++ G +L++   I EEIL ++  L
Subjt:  IDQLDSLEEQGSIQPQEIAERSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNL

TrEMBL top hitse value%identityAlignment
A0A438DB63 Transposon TX1 uncharacterized 149 kDa protein1.2e-8740.1Show/hide
Query:  DLEGLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWIT
        ++ GLG+  KR +IKD L  E PD+V++QE+K +K DRRLV SVW+ R+  W+ L A G+  GIL +W    +   + VLG+FSI+++    G    WI+
Subjt:  DLEGLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWIT

Query:  RVYGTCSSSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWT
         VYG  S S RK F+ ELYD+ G     WC+  DFNV+R   ++L   R+  S R F+ FIS  +L+D PL N  FTWS         RLDRF  S +W 
Subjt:  RVYGTCSSSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWT

Query:  RTFKDLRLDRLHRIASDHFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQR
        + F     + L R  SDH+PI+L T    WGP+PFRFENMWL +P FK+N  +WW+     GW G +FM +++ +K  ++ WNK   G L +KK  IL+ 
Subjt:  RTFKDLRLDRLHRIASDHFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQR

Query:  IDQLDSLEEQGSIQPQEIAERSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNL
        +  LD++E+ G +  + + +R+  K  L E+ + ++    QK ++KW++EGD N+ FFH+  +  +++ +I +LE++ G +L++   I EEIL ++  L
Subjt:  IDQLDSLEEQGSIQPQEIAERSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNL

A0A438GDE7 LINE-1 retrotransposable element ORF2 protein2.6e-9039.7Show/hide
Query:  GLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWITRVY
        GLG++ KR ++KD L  E PD+V+ QE+K ++ DRR V SVW++R+  W AL A G+  GIL++W    +   + +LG+FS++++   +G    W++ VY
Subjt:  GLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWITRVY

Query:  GTCSSSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWTRTF
        G  +S+ RK  + EL D+AG     WC+  DFNV+R   ++L   R+  S + F+ FIS  +LID+PL +  FTWS         RLDRF  S +W +TF
Subjt:  GTCSSSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWTRTF

Query:  KDLRLDRLHRIASDHFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQRIDQ
               L R  SDH+PI L T   KWGP+PFRFENMWL +P FK+N   WW+E    GW G +FM K++ +K  ++ WNK   G L  +K  IL  +  
Subjt:  KDLRLDRLHRIASDHFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQRIDQ

Query:  LDSLEEQGSIQPQEIAERSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNLCT
         DSLE++G +  + +A+R+  K  L E+ + ++    QK ++KW++EGD N+ FFH+  +  +++ FI  LE+++G+++++   I+EEIL+++  L T
Subjt:  LDSLEEQGSIQPQEIAERSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNLCT

A0A438JX47 LINE-1 retrotransposable element ORF2 protein7.6e-9039.45Show/hide
Query:  GLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWITRVY
        GLG++ KR ++KD L  E PD+V+ QE+K ++ DRR V SVW++R+  W  L A G+  GIL++W    +   + +LG+FS++++   +G    W++ VY
Subjt:  GLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWITRVY

Query:  GTCSSSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWTRTF
        G  +S+ RK  + EL D+AG     WC+  DFNV+R   ++L   R+  S + F+ FIS  +LID+PL +  FTWS         RLDRF  S +W +TF
Subjt:  GTCSSSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWTRTF

Query:  KDLRLDRLHRIASDHFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQRIDQ
               L R  SDH+PI L T   KWGP+PFRFENMWL +P FK+N   WW+E    GW G +FM K++ +K  ++ WNK   G L  +K  IL  +  
Subjt:  KDLRLDRLHRIASDHFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQRIDQ

Query:  LDSLEEQGSIQPQEIAERSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNLCT
         DSLE++G +  + +A+R+  K  L E+ + ++    QK ++KW++EGD N+ FFH+  +  +++ FI  LE+++G+++++   I+EEIL+++  L T
Subjt:  LDSLEEQGSIQPQEIAERSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNLCT

A0A438KGJ2 Transposon TX1 uncharacterized 149 kDa protein2.1e-8740.1Show/hide
Query:  DLEGLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWIT
        ++ GLG+  KR  IKD L  E PD+V++QE+K +K D+RLV SVW+ R+  W+ L A G+  GIL +W    +   + VLG+FSI+++ V  G    WI+
Subjt:  DLEGLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWIT

Query:  RVYGTCSSSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWT
         VYG  S S RK F+ ELYD+ G     WC+  DFNV+R   ++L   R+  S R F+ FIS  +L+D PL N  FTWS         RLDRF  S +W 
Subjt:  RVYGTCSSSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWT

Query:  RTFKDLRLDRLHRIASDHFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQR
        + F     + L R  SDH+PI+L T    WGP+PFRFENMWL +P FK+N  +WW+     GW G +FM +++ +K   + WNK   G L +KK  IL+ 
Subjt:  RTFKDLRLDRLHRIASDHFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQR

Query:  IDQLDSLEEQGSIQPQEIAERSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNL
        +  LD++E+ G +  + + +R+  K  L E+ + ++    QK ++KW++EGD N+ FFH+  +  +++ +I +LE++ G +L++   I EEIL ++  L
Subjt:  IDQLDSLEEQGSIQPQEIAERSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNL

A5CAA2 Reverse transcriptase domain-containing protein2.6e-9039.7Show/hide
Query:  GLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWITRVY
        GLG++ KR ++KD L  E PD+V+ QE+K ++ DRR V SVW++R+  W AL A G+  GIL++W    +   + +LG+FS++++   +G    W++ VY
Subjt:  GLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWITRVY

Query:  GTCSSSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWTRTF
        G  +S+ RK  + EL D+AG     WC+  DFNV+R   ++L   R+  S + F+ FIS  +LID+PL +  FTWS         RLDRF  S +W +TF
Subjt:  GTCSSSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWTRTF

Query:  KDLRLDRLHRIASDHFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQRIDQ
               L R  SDH+PI L T   KWGP+PFRFENMWL +P FK+N   WW+E    GW G +FM K++ +K  ++ WNK   G L  +K  IL  +  
Subjt:  KDLRLDRLHRIASDHFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQRIDQ

Query:  LDSLEEQGSIQPQEIAERSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNLCT
         DSLE++G +  + +A+R+  K  L E+ + ++    QK ++KW++EGD N+ FFH+  +  +++ FI  LE+++G+++++   I+EEIL+++  L T
Subjt:  LDSLEEQGSIQPQEIAERSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNLCT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein3.8e-1725.81Show/hide
Query:  LARDFNVVRWVEDRLYALRINKSSRKFNKFISIF---DLIDIPLANGGFTWS-RAGNRGAASRLDRFFVSRDWTRTFKD-LRLDRLHRIASDHFP-ISLS
        L  DF+ +    D    L+ +   R   +F +     DL+DIP     +TWS    +     +LDR   + DW  +F   + +  L  + SDH P I + 
Subjt:  LARDFNVVRWVEDRLYALRINKSSRKFNKFISIF---DLIDIPLANGGFTWS-RAGNRGAASRLDRFFVSRDWTRTFKD-LRLDRLHRIASDHFP-ISLS

Query:  TGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQRIDQLDSLEEQGSIQPQE----IAE
            K     FR+ +    +P F  +L   W+E  P G   F     ++  K   +  N++  GN+  K     + +D L+S++ Q    P +    +  
Subjt:  TGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQRIDQLDSLEEQGSIQPQE----IAE

Query:  RSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNL
         +  K +    A+    R  QK +IKW+++GD NT FFH+   A ++K  I  L   D   + +   ++E I+ +Y +L
Subjt:  RSTLKASLTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACCATTGGCCCAAGCTGACGCAATGGGGGAAAATAGTGGCAAGGAACGGGAATGGCAAAATGACATACAACCGACAGCTCTGGATGTGGTCTCCCCGGTGACAAT
CAGAAAGAAGAACGATAGAAGTGATAAGCCTGATGGCTTTGGGATAAGTAGAAAAGTGGCGATTACCCTGAGGAAGAATAATTTATGCATCAAGCCAATTGTGGGTAACT
CAACGAGAAAAGGTAACACAACCCAGAAGAAACGTAACAGAGAAATCACTAACCTCCTGAGGACCTGGGAAAAGGATGCTGAAACAGAGATAGCTAATGAAGAAGGGCAA
CAAGATGTAGATTTAGAAGGCTTGGGAGCTCAGCCGAAAAGAGCTCTGATTAAAGACTTGCTTTGTAGAGAGAACCCGGACATGGTGATCCTTCAAGAGTCCAAATTAGA
CAAAGTGGATAGAAGATTAGTTAAATCTGTGTGGAGCTCGAGAGATGTGGGCTGGATCGCGTTAGAGGCTTTGGGTTCAGAGGCCGGCATCCTTGTCATGTGGAAAGAGA
ATTGTATAGATGTTGTTGATTCTGTTCTGGGAGCCTTCTCCATTACCCTTGAATGTGTGTTCCACGGTCACATCAAAGGTTGGATTACGAGAGTGTATGGCACTTGCTCA
TCCTCCAACAGAAAGGCCTTCTTCCAGGAGCTTTATGATCTAGCAGGGTTTTGTCAAGGTAATTGGTGTCTGGCTAGAGACTTCAACGTTGTTAGATGGGTTGAAGATAG
GTTGTATGCTTTGAGGATCAACAAAAGCTCGAGAAAGTTCAATAAGTTTATTTCTATCTTTGATCTTATTGATATTCCCTTGGCTAATGGCGGGTTTACTTGGTCTAGAG
CTGGTAATCGGGGGGCAGCCTCAAGGTTGGACAGATTCTTCGTCTCTAGAGATTGGACAAGAACGTTTAAGGATCTTAGGCTTGACAGATTACATCGTATTGCCTCTGAT
CACTTCCCCATCTCCTTGTCTACAGGAGCTATGAAATGGGGCCCCTCGCCCTTCAGATTTGAGAACATGTGGCTTGATAACCCGGACTTCAAGAAAAATCTGGAAAGCTG
GTGGAAGGAGATGAATCCAACGGGCTGGGCTGGCTTTAGATTTATGTCTAAGATGAGAAGGTTGAAAGATTACATCAGGGCGTGGAACAAAGAAGTTTTGGGCAACCTGA
TTGACAAGAAGAATTACATCCTTCAGAGAATTGACCAGCTAGATTCTCTGGAAGAACAAGGTTCCATCCAGCCTCAGGAGATTGCCGAGAGATCCACTTTGAAAGCTTCT
CTTACCGAAATTGCCATGAATGATCAAAGGAGGCTTTGCCAAAAGTGCAAAATTAAGTGGATGGAGGAGGGAGATGAAAACACCTCGTTCTTCCATAGATGGACGTCGGC
CATGAAAAGTAAAGCGTTCATTGCTACCTTAGAGAGCCAAGATGGCAGAATTTTATCCTCGGATGCTGACATTGAGGAAGAAATCCTCCAGTTTTATAACAATCTTTGTA
CTAAACTAAAGATAGCAGGAATCGTTTTGTCTTGGAGAATATTAGTTGGGAAGCGATTGATGAGCAAAGTAGTGCCTCGCTTGAAACTCCCTTCAGTGAAGAGGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGATACCATTGGCCCAAGCTGACGCAATGGGGGAAAATAGTGGCAAGGAACGGGAATGGCAAAATGACATACAACCGACAGCTCTGGATGTGGTCTCCCCGGTGACAAT
CAGAAAGAAGAACGATAGAAGTGATAAGCCTGATGGCTTTGGGATAAGTAGAAAAGTGGCGATTACCCTGAGGAAGAATAATTTATGCATCAAGCCAATTGTGGGTAACT
CAACGAGAAAAGGTAACACAACCCAGAAGAAACGTAACAGAGAAATCACTAACCTCCTGAGGACCTGGGAAAAGGATGCTGAAACAGAGATAGCTAATGAAGAAGGGCAA
CAAGATGTAGATTTAGAAGGCTTGGGAGCTCAGCCGAAAAGAGCTCTGATTAAAGACTTGCTTTGTAGAGAGAACCCGGACATGGTGATCCTTCAAGAGTCCAAATTAGA
CAAAGTGGATAGAAGATTAGTTAAATCTGTGTGGAGCTCGAGAGATGTGGGCTGGATCGCGTTAGAGGCTTTGGGTTCAGAGGCCGGCATCCTTGTCATGTGGAAAGAGA
ATTGTATAGATGTTGTTGATTCTGTTCTGGGAGCCTTCTCCATTACCCTTGAATGTGTGTTCCACGGTCACATCAAAGGTTGGATTACGAGAGTGTATGGCACTTGCTCA
TCCTCCAACAGAAAGGCCTTCTTCCAGGAGCTTTATGATCTAGCAGGGTTTTGTCAAGGTAATTGGTGTCTGGCTAGAGACTTCAACGTTGTTAGATGGGTTGAAGATAG
GTTGTATGCTTTGAGGATCAACAAAAGCTCGAGAAAGTTCAATAAGTTTATTTCTATCTTTGATCTTATTGATATTCCCTTGGCTAATGGCGGGTTTACTTGGTCTAGAG
CTGGTAATCGGGGGGCAGCCTCAAGGTTGGACAGATTCTTCGTCTCTAGAGATTGGACAAGAACGTTTAAGGATCTTAGGCTTGACAGATTACATCGTATTGCCTCTGAT
CACTTCCCCATCTCCTTGTCTACAGGAGCTATGAAATGGGGCCCCTCGCCCTTCAGATTTGAGAACATGTGGCTTGATAACCCGGACTTCAAGAAAAATCTGGAAAGCTG
GTGGAAGGAGATGAATCCAACGGGCTGGGCTGGCTTTAGATTTATGTCTAAGATGAGAAGGTTGAAAGATTACATCAGGGCGTGGAACAAAGAAGTTTTGGGCAACCTGA
TTGACAAGAAGAATTACATCCTTCAGAGAATTGACCAGCTAGATTCTCTGGAAGAACAAGGTTCCATCCAGCCTCAGGAGATTGCCGAGAGATCCACTTTGAAAGCTTCT
CTTACCGAAATTGCCATGAATGATCAAAGGAGGCTTTGCCAAAAGTGCAAAATTAAGTGGATGGAGGAGGGAGATGAAAACACCTCGTTCTTCCATAGATGGACGTCGGC
CATGAAAAGTAAAGCGTTCATTGCTACCTTAGAGAGCCAAGATGGCAGAATTTTATCCTCGGATGCTGACATTGAGGAAGAAATCCTCCAGTTTTATAACAATCTTTGTA
CTAAACTAAAGATAGCAGGAATCGTTTTGTCTTGGAGAATATTAGTTGGGAAGCGATTGATGAGCAAAGTAGTGCCTCGCTTGAAACTCCCTTCAGTGAAGAGGAGATAG
Protein sequenceShow/hide protein sequence
MIPLAQADAMGENSGKEREWQNDIQPTALDVVSPVTIRKKNDRSDKPDGFGISRKVAITLRKNNLCIKPIVGNSTRKGNTTQKKRNREITNLLRTWEKDAETEIANEEGQ
QDVDLEGLGAQPKRALIKDLLCRENPDMVILQESKLDKVDRRLVKSVWSSRDVGWIALEALGSEAGILVMWKENCIDVVDSVLGAFSITLECVFHGHIKGWITRVYGTCS
SSNRKAFFQELYDLAGFCQGNWCLARDFNVVRWVEDRLYALRINKSSRKFNKFISIFDLIDIPLANGGFTWSRAGNRGAASRLDRFFVSRDWTRTFKDLRLDRLHRIASD
HFPISLSTGAMKWGPSPFRFENMWLDNPDFKKNLESWWKEMNPTGWAGFRFMSKMRRLKDYIRAWNKEVLGNLIDKKNYILQRIDQLDSLEEQGSIQPQEIAERSTLKAS
LTEIAMNDQRRLCQKCKIKWMEEGDENTSFFHRWTSAMKSKAFIATLESQDGRILSSDADIEEEILQFYNNLCTKLKIAGIVLSWRILVGKRLMSKVVPRLKLPSVKRR