; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041340 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041340
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr13:16020297..16021276
RNA-Seq ExpressionLag0041340
SyntenyLag0041340
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4386304.1 hypothetical protein G4B88_003521 [Cannabis sativa]3.1e-2532.16Show/hide
Query:  KIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLSWWIWN
        K+KIF W++++ +LPS   L +RG+     C  CK ++E T HA+W C  V+  W+K  FF    PN I   AD+LWW W      +F  FV  SW IW 
Subjt:  KIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLSWWIWN

Query:  RRNKEFFGGSFNSEMEDGGW-GWVVEYLAHFRAFQGKGDMRGAGMRV--VSGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGEVMLTLMRRIPFV
        RRN   F    N    D  W  W +E +       G    +   +++   + W  P    + +NTD A++S +    + A++RN  GE+++  +  +P  
Subjt:  RRNKEFFGGSFNSEMEDGGW-GWVVEYLAHFRAFQGKGDMRGAGMRV--VSGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGEVMLTLMRRIPFV

Query:  QDVDILEVLAIREGLAVRGRWGSQSWR
          V + E  AIR G+ +  RW  +  R
Subjt:  QDVDILEVLAIREGLAVRGRWGSQSWR

XP_023908235.1 uncharacterized protein LOC112019924 [Quercus suber]1.2e-2434.8Show/hide
Query:  MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKS-PFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVL
        ++IPNKIK+F WR  HD LP+  NLR++ +   + CP C + +E+T HA+WEC   +  W  S     + G   +   A LL +    +   + E F+V 
Subjt:  MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKS-PFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVL

Query:  SWWIWNRRNKEFFGGSFNSEMEDG-----GWGWVVEYLAHFRAFQGKGDMRGAGMRVV----SGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGE
        +W IWN+RN+  +GG     ME G       G + E+     + Q    M G   +V+    + W PP    YKLN D AV      S   AVVRN  G+
Subjt:  SWWIWNRRNKEFFGGSFNSEMEDG-----GWGWVVEYLAHFRAFQGKGDMRGAGMRVV----SGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGE

Query:  VMLTLMRRIPFVQDVDILEVLAIREGL
        VM  +  + P VQ  ++ E+LA R+ L
Subjt:  VMLTLMRRIPFVQDVDILEVLAIREGL

XP_023915286.1 uncharacterized protein LOC112026812 [Quercus suber]7.4e-2738.29Show/hide
Query:  MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQK-SPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVL
        ++IPNKIK+F W+  H+ LP++  LR+R +   E CP CK+  +T  HA+WECKA +  W   S    + G         L    W  M    FE F+VL
Subjt:  MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQK-SPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVL

Query:  SWWIWNRRNKEFFGGSFNSEMEDGGW-GWVVEYLAHF---RAFQGKGDMRGAGMRVVSGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGEVMLTL
         W +W+RRN+  FGG      E G   G     LA F   R      +      R    W PP+   YKLN DVAV S++  S +  ++RN  G+VM  L
Subjt:  SWWIWNRRNKEFFGGSFNSEMEDGGW-GWVVEYLAHF---RAFQGKGDMRGAGMRVVSGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGEVMLTL

Query:  MRRIPFVQDVDILEVLAIREGL
          R P V D D  EVLA R GL
Subjt:  MRRIPFVQDVDILEVLAIREGL

XP_030941688.1 uncharacterized protein LOC115966628 [Quercus lobata]9.7e-2730.38Show/hide
Query:  MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLS
        +++PNKIK++ WR   D LP+ +NL RR +   E C  CK   ET  HA+WEC   +  W  S    +           L       +   +FE F+ LS
Subjt:  MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLS

Query:  WWIWNRRNKEFFGGSFNSEMEDGG--WGWVVEYLAHFRAFQGKGDMRGAGMRVVSGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGEVMLTLMRR
        W IWN+RN    GG    +++D G        YL  +R  Q +  +  +  + V+ W PP    YKLN D A+ +E+  S   A+VRNERGEVM  L  +
Subjt:  WWIWNRRNKEFFGGSFNSEMEDGG--WGWVVEYLAHFRAFQGKGDMRGAGMRVVSGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGEVMLTLMRR

Query:  IPFVQDVDILEVLAIREG-----------LAVRG---------------------------------RWGSQSW--RSANRLAHEVARTALVQRCEGIWS
         P V + +  E LA R             L + G                                 RW S S   R AN +AH +AR A     E IW 
Subjt:  IPFVQDVDILEVLAIREG-----------LAVRG---------------------------------RWGSQSW--RSANRLAHEVARTALVQRCEGIWS

Query:  EDVPAVVEEVYRSEVL
        E+ P +  +    ++L
Subjt:  EDVPAVVEEVYRSEVL

XP_030964861.1 uncharacterized protein LOC115986145 [Quercus lobata]5.3e-2534.25Show/hide
Query:  MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLS
        +++PNKIK+F WR  H+ LP+  NL RR +   + C  C    ET  HA+WEC   +  W  +    +      +    L       +  A+FE F+V S
Subjt:  MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLS

Query:  WWIWNRRNKEFFGGSFNSEMEDGGW--GWVVEYLAHFRAFQGKGDMRGAGMRVVSGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGEVMLTLMRR
        W IWN+RN    GG    +++D  W      +YL  F   QG+  +          W PP  P YKLN D A+ S++  S + AV+RN   EVM  +  R
Subjt:  WWIWNRRNKEFFGGSFNSEMEDGGW--GWVVEYLAHFRAFQGKGDMRGAGMRVVSGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGEVMLTLMRR

Query:  IPFVQDVDILEVLAIREGL
         P V D    E+LA R+ L
Subjt:  IPFVQDVDILEVLAIREGL

TrEMBL top hitse value%identityAlignment
A0A2N9EYC3 Reverse transcriptase domain-containing protein2.2e-2431.67Show/hide
Query:  MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLS
        +QIP+K + F WR  H  LP+ SNL  R +     C  C  + E+T HA+W+CK++   W   P+  +    S     DL++ C   +   +F+ F V+ 
Subjt:  MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLS

Query:  WWIWNRRNKEFF--GGSFNSEMEDGGWGWVVEYLAHFRAFQGKGDMRG--AGMRVVSGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGEVMLTLM
        W IW RRN+         N+++         E L  F   Q +G  R   +    V  W PP    YK+N D AV ++   + +  ++RN RGEVM  L 
Subjt:  WWIWNRRNKEFF--GGSFNSEMEDGGWGWVVEYLAHFRAFQGKGDMRG--AGMRVVSGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGEVMLTLM

Query:  RRIPFVQDVDILEVLAIREGL
        +RIP+   V+ +E  A R  +
Subjt:  RRIPFVQDVDILEVLAIREGL

A0A2N9G0G1 Uncharacterized protein9.8e-2532.13Show/hide
Query:  MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLS
        +QIP+KI+ F WR  H  LP+ SNL  R +     C  C  + E+T HA+W+CK++   W   P+  +    S     DL++ C   +   + + F V+ 
Subjt:  MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLS

Query:  WWIWNRRNKEFF--GGSFNSEMEDGGWGWVVEYLAHFRAFQGKGDMRG--AGMRVVSGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGEVMLTLM
        W IW RRN+         N+++         E L  F A Q +G  R        V  W PP    +K+N D AV S+   + +  ++RN RGEVM  L 
Subjt:  WWIWNRRNKEFF--GGSFNSEMEDGGWGWVVEYLAHFRAFQGKGDMRG--AGMRVVSGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGEVMLTLM

Query:  RRIPFVQDVDILEVLAIREGL
        +RIP+   V+ +E  A R  +
Subjt:  RRIPFVQDVDILEVLAIREGL

A0A6J1DAR4 uncharacterized protein LOC1110189541.1e-2328.57Show/hide
Query:  MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLS
        M IPNKIK+F WR+  D LP+  NL +RG++    C  C    E + H  W CK     W  S  F +  P  I      L     ++  A FEE  V+ 
Subjt:  MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLS

Query:  WWIWNRRNKEFFGGSFNSEMEDGG--WGWVVEYLAHFRAFQGKGDMRGAGMRVVSGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGEVMLTLMRR
        W +WN+RN   F  S  +  + G     W  +Y   FR  +               W PP    YK+NTD +  +  Q + +  ++ N+RG+VM    + 
Subjt:  WWIWNRRNKEFFGGSFNSEMEDGG--WGWVVEYLAHFRAFQGKGDMRGAGMRVVSGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGEVMLTLMRR

Query:  IPFVQDVDILEVLAIREGLAVRGRWG------------------SQSW------------RSANRLAHEVARTALVQRCEGIWSEDVPAVVEEVYRSEVL
        +  +Q VD+ E +A  EGL +    G                     W            R  N+ AH +AR AL+     IW ED P  ++     E L
Subjt:  IPFVQDVDILEVLAIREGLAVRGRWG------------------SQSW------------RSANRLAHEVARTALVQRCEGIWSEDVPAVVEEVYRSEVL

Query:  D
        +
Subjt:  D

A0A7J6FF66 Uncharacterized protein7.5e-2529.29Show/hide
Query:  IPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLSWW
        +  K+KIF WR++H++LP  + L +RGM     C  CK   E   HA+W C  +   W+   F     P+S+R A D L      +   +F  F+ ++W 
Subjt:  IPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLSWW

Query:  IWNRRNKEFFGGSFNSEMEDGGW-GWVVEYLAHFRAFQGKGDMRGAGMRVVSGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGEVMLTLMRRIPF
        IW RRNK  F    N ++ED  W  W +E L    AF  K   +      VS WSPP   ++ +NTD ++        +  ++R+  G ++ T    IP 
Subjt:  IWNRRNKEFFGGSFNSEMEDGGW-GWVVEYLAHFRAFQGKGDMRGAGMRVVSGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGEVMLTLMRRIPF

Query:  VQDVDILEVLAIREGLAVRGRWGSQS------WRSANRLAHEVARTALVQRCEGIWSEDVPAVVEEVYRSEVLDSPFGVS
           V + E LAIR  L +      Q+       +S N +AH +A  + +     +W+  +P       ++   D P G S
Subjt:  VQDVDILEVLAIREGLAVRGRWGSQS------WRSANRLAHEVARTALVQRCEGIWSEDVPAVVEEVYRSEVLDSPFGVS

A0A7J6GTN3 Uncharacterized protein1.5e-2532.16Show/hide
Query:  KIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLSWWIWN
        K+KIF W++++ +LPS   L +RG+     C  CK ++E T HA+W C  V+  W+K  FF    PN I   AD+LWW W      +F  FV  SW IW 
Subjt:  KIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLSWWIWN

Query:  RRNKEFFGGSFNSEMEDGGW-GWVVEYLAHFRAFQGKGDMRGAGMRV--VSGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGEVMLTLMRRIPFV
        RRN   F    N    D  W  W +E +       G    +   +++   + W  P    + +NTD A++S +    + A++RN  GE+++  +  +P  
Subjt:  RRNKEFFGGSFNSEMEDGGW-GWVVEYLAHFRAFQGKGDMRGAGMRV--VSGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGEVMLTLMRRIPFV

Query:  QDVDILEVLAIREGLAVRGRWGSQSWR
          V + E  AIR G+ +  RW  +  R
Subjt:  QDVDILEVLAIREGLAVRGRWGSQSWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein2.2e-0531.75Show/hide
Query:  MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKS
        + +  KIK F WR     L + + LR R +D    C RC ++EET  H ++ C   +  W+ +
Subjt:  MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKS

AT3G09510.1 Ribonuclease H-like superfamily protein2.9e-0533.33Show/hide
Query:  MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKS
        + I  K+K F WR     L +   L  RGM     CPRC  + E+  HA++ C      W+ S
Subjt:  MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATTCCGAACAAAATCAAGATATTCTGCTGGAGAATGTATCATGACTATCTGCCTTCAGTGTCAAATTTGCGCAGAAGAGGGATGGATTTTCAGGAGGAATGTCC
CAGATGTAAGGTTAAGGAGGAAACAACTTTCCATGCCATATGGGAATGTAAAGCAGTGAGGAAATGTTGGCAGAAATCGCCATTTTTTCCGAGACCAGGTCCTAATTCCA
TTCGTTGTGCTGCAGATCTATTGTGGTGGTGCTGGAGGAATATGCTAGGTGCCCAATTTGAGGAGTTTGTGGTGCTGTCTTGGTGGATTTGGAATAGAAGGAACAAGGAG
TTTTTTGGAGGGAGCTTTAATTCGGAGATGGAGGATGGAGGGTGGGGTTGGGTTGTGGAGTACTTAGCCCATTTTCGGGCATTCCAGGGGAAAGGGGACATGAGAGGGGC
GGGTATGAGGGTGGTTTCGGGTTGGAGCCCTCCGATTTTTCCTAATTATAAACTCAACACAGATGTTGCAGTTGATTCAGAGATGCAATTGAGTAGTATGAGAGCGGTGG
TGCGAAATGAGAGGGGAGAAGTTATGCTTACCTTAATGAGGAGGATTCCATTTGTGCAAGATGTGGATATCCTTGAAGTGTTGGCTATTCGAGAGGGCTTGGCTGTGCGA
GGGAGATGGGGCTCACAAAGCTGGAGGTCAGCGAATCGACTGGCCCACGAAGTTGCGAGGACGGCTCTGGTGCAGCGGTGCGAAGGAATCTGGTCGGAGGATGTTCCAGC
GGTGGTAGAAGAGGTGTATCGCTCTGAGGTTTTGGACAGTCCCTTCGGTGTGTCGGGGGGCTGTAGGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAATTCCGAACAAAATCAAGATATTCTGCTGGAGAATGTATCATGACTATCTGCCTTCAGTGTCAAATTTGCGCAGAAGAGGGATGGATTTTCAGGAGGAATGTCC
CAGATGTAAGGTTAAGGAGGAAACAACTTTCCATGCCATATGGGAATGTAAAGCAGTGAGGAAATGTTGGCAGAAATCGCCATTTTTTCCGAGACCAGGTCCTAATTCCA
TTCGTTGTGCTGCAGATCTATTGTGGTGGTGCTGGAGGAATATGCTAGGTGCCCAATTTGAGGAGTTTGTGGTGCTGTCTTGGTGGATTTGGAATAGAAGGAACAAGGAG
TTTTTTGGAGGGAGCTTTAATTCGGAGATGGAGGATGGAGGGTGGGGTTGGGTTGTGGAGTACTTAGCCCATTTTCGGGCATTCCAGGGGAAAGGGGACATGAGAGGGGC
GGGTATGAGGGTGGTTTCGGGTTGGAGCCCTCCGATTTTTCCTAATTATAAACTCAACACAGATGTTGCAGTTGATTCAGAGATGCAATTGAGTAGTATGAGAGCGGTGG
TGCGAAATGAGAGGGGAGAAGTTATGCTTACCTTAATGAGGAGGATTCCATTTGTGCAAGATGTGGATATCCTTGAAGTGTTGGCTATTCGAGAGGGCTTGGCTGTGCGA
GGGAGATGGGGCTCACAAAGCTGGAGGTCAGCGAATCGACTGGCCCACGAAGTTGCGAGGACGGCTCTGGTGCAGCGGTGCGAAGGAATCTGGTCGGAGGATGTTCCAGC
GGTGGTAGAAGAGGTGTATCGCTCTGAGGTTTTGGACAGTCCCTTCGGTGTGTCGGGGGGCTGTAGGCTTTAG
Protein sequenceShow/hide protein sequence
MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLSWWIWNRRNKE
FFGGSFNSEMEDGGWGWVVEYLAHFRAFQGKGDMRGAGMRVVSGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGEVMLTLMRRIPFVQDVDILEVLAIREGLAVR
GRWGSQSWRSANRLAHEVARTALVQRCEGIWSEDVPAVVEEVYRSEVLDSPFGVSGGCRL