; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041370 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041370
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr13:16685181..16686690
RNA-Seq ExpressionLag0041370
SyntenyLag0041370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS36166.1 hypothetical protein Acr_00g0044420 [Actinidia rufa]1.2e-0934.62Show/hide
Query:  LTADRLEFLRRKYDIPDDVHLRLPNADENFENPP-DGELAPNGWCHLIGCFTLWAMHGGGSLMTVDDFLSLHTINRNPA--FGDLFYYASTKKGTLISGP
        +T + L  LR  Y  P  V +RLP+  EN  +    GEL PN W  +     LW ++     +++ +F +L ++N NP    G L++ A  KK  L   P
Subjt:  LTADRLEFLRRKYDIPDDVHLRLPNADENFENPP-DGELAPNGWCHLIGCFTLWAMHGGGSLMTVDDFLSLHTINRNPA--FGDLFYYASTKKGTLISGP

Query:  TSVKKWKNGWFFVSGNWLERTEDGCFFGVP
         +VK WK+ +FFVSG+  E  E     G P
Subjt:  TSVKKWKNGWFFVSGNWLERTEDGCFFGVP

GFZ15786.1 hypothetical protein Acr_25g0001950 [Actinidia rufa]8.9e-0831.21Show/hide
Query:  LTADRLEFLRRKYDIPDDVHLRLPNADE------------NFENPPDGELAPNGWCHLIGCFTLWAMHGGGSLMTVDDFLSLHTINRNPA--FGDLFYYA
        +T + L+ LR  Y  P  V +RLP+  E             F N    +L PN W  +     LW ++     +++ +F +L ++N NP    G L++ A
Subjt:  LTADRLEFLRRKYDIPDDVHLRLPNADE------------NFENPPDGELAPNGWCHLIGCFTLWAMHGGGSLMTVDDFLSLHTINRNPA--FGDLFYYA

Query:  STKKGTLISGPTSVKKWKNGWFFVSGNWLERTEDGCFFGVP
          KK  L   P++VK WK+ +FFVSG+  E  E     G P
Subjt:  STKKGTLISGPTSVKKWKNGWFFVSGNWLERTEDGCFFGVP

XP_022159063.1 uncharacterized protein LOC111025502, partial [Momordica charantia]3.9e-1129.41Show/hide
Query:  DSSDGEPPAHSSDLSSSLTADRLEFLRRKYDIPDDVHLRLPNADENFENPPDG---------------------------------ELAPNGWCHLIGCF
        + SD        +  S +    L  LRR + IP+++ LRLP   E  +NPP+G                                 ++APNGW  +    
Subjt:  DSSDGEPPAHSSDLSSSLTADRLEFLRRKYDIPDDVHLRLPNADENFENPPDG---------------------------------ELAPNGWCHLIGCF

Query:  TLWAMHGGGS----LMTVDDFLSLHTINRNPAFGDLFYYASTK-KGTLISGPTSVKKWKNGWFFVSGNWLERTEDG-CFFGVPMRFG
         L+ +    S    L  VD  L+     R       FY  + K  G ++ GPTS+K W   WF+ SG WL + E G  FF VP RFG
Subjt:  TLWAMHGGGS----LMTVDDFLSLHTINRNPAFGDLFYYASTK-KGTLISGPTSVKKWKNGWFFVSGNWLERTEDG-CFFGVPMRFG

XP_028059423.1 uncharacterized protein LOC114263132 [Camellia sinensis]2.3e-0829.03Show/hide
Query:  HSSDLSSSLTADRLEFLRRKYDIPDDVHLRLPNADENFENP---------------------------------PDGELAPNGWCHLIGCFTLWAMHGGG
        H+    S+ TA+ LE +RRKY IP ++ L+LP + E   N                                    G+L PN W  L+ C   W+   GG
Subjt:  HSSDLSSSLTADRLEFLRRKYDIPDDVHLRLPNADENFENP---------------------------------PDGELAPNGWCHLIGCFTLWAMHGGG

Query:  SLMTVDDFLSLH-TINRNPAFGDLFYYASTKKGTLISGPTSVKKWKNGWFFVSGN
        + MTV++  S +   ++   +  L   A   +G +   P+SVK W+  WFFVS N
Subjt:  SLMTVDDFLSLH-TINRNPAFGDLFYYASTKKGTLISGPTSVKKWKNGWFFVSGN

XP_038891101.1 uncharacterized protein LOC120080500 [Benincasa hispida]1.1e-0830.28Show/hide
Query:  MTVDDFLSLHTINRNPAFGDLFYYASTKKGTLISGPTSVKKWKNGWFFVSGNWLERTEDGCFFGVPMRFGEYGELSILLPIGIQSLLLFFSFADFSLCFS
        M++  FLSL+ INR+  F D F Y    K  L+   +SVK W   WFF  G+WL   E G  + VP RF ++                            
Subjt:  MTVDDFLSLHTINRNPAFGDLFYYASTKKGTLISGPTSVKKWKNGWFFVSGNWLERTEDGCFFGVPMRFGEYGELSILLPIGIQSLLLFFSFADFSLCFS

Query:  VPRNVRRSPTAKKFAKYVLTLEKINRHGPFLVDQSVLEASGL
        VPR    S  A+  A+ + +  K  +HG   + Q  L   GL
Subjt:  VPRNVRRSPTAKKFAKYVLTLEKINRHGPFLVDQSVLEASGL

TrEMBL top hitse value%identityAlignment
A0A2N9FXG2 Uncharacterized protein1.0e-0929.39Show/hide
Query:  MASEGSVTSP----DVEESYSDDGPSSSGCFVDPEISDSSDGEPPAHSSD----LSSSLTADRLEFLRRKYDIPDDVHLRLPNADE--------------
        MA+EGS  SP    D+ E  SD    +      P IS SS+G  P         LS  + AD L+  RRKY IP+DV LR+P +DE              
Subjt:  MASEGSVTSP----DVEESYSDDGPSSSGCFVDPEISDSSDGEPPAHSSD----LSSSLTADRLEFLRRKYDIPDDVHLRLPNADE--------------

Query:  -------------------NFENPPDGELAPNGWCHLIGCFTLW-AMHGGGSLMTVDDFLSLHTINRNPAFGDLFYYASTKKG--TLISGPTSVKKWKNG
                           N  N   G+LAPN W  ++G   +W  +  G   +T+D+ L  +   + PA    +     ++G   ++  P+S ++WK+ 
Subjt:  -------------------NFENPPDGELAPNGWCHLIGCFTLW-AMHGGGSLMTVDDFLSLHTINRNPAFGDLFYYASTKKG--TLISGPTSVKKWKNG

Query:  WFFVSG-NW--LERTEDGCFFGVPMRFG
        + FV G NW  L   +D  F  V  ++G
Subjt:  WFFVSG-NW--LERTEDGCFFGVPMRFG

A0A2N9G998 Uncharacterized protein3.5e-1031.63Show/hide
Query:  SEGSVTSPDVEESYSDDGPSSSGCFVDPEISDSSDGEPPAHS----SDLSSSLTADRLEFLRRKYDIPDDVHLRLPNADENFE-------NPPDGELAPN
        S  SV S D+ E  SD G  S      P +S SS    P  S    S LS  +  + L+ LR +Y IP+DV LR+P +DE          N   G+LAPN
Subjt:  SEGSVTSPDVEESYSDDGPSSSGCFVDPEISDSSDGEPPAHS----SDLSSSLTADRLEFLRRKYDIPDDVHLRLPNADENFE-------NPPDGELAPN

Query:  GWCHLIGCFTLW-AMHGGGSLMTVDDFLSLHTINRNPAFGDLFYYASTKKG--TLISGPTSVKKWKNGWFFVSG-NW--LERTEDGCFFGVPMRFG
         W  ++G   +W  +  G   +T+D+ L  +   + PA    +     ++G   ++  P+S ++WK+ + FV G NW  L+  +D  F  V   +G
Subjt:  GWCHLIGCFTLW-AMHGGGSLMTVDDFLSLHTINRNPAFGDLFYYASTKKG--TLISGPTSVKKWKNGWFFVSG-NW--LERTEDGCFFGVPMRFG

A0A2N9HFQ4 Uncharacterized protein7.1e-1133.89Show/hide
Query:  SEGS---VTSPDVEESYSDDGPSSSGCFVDPEISDSSDGEPPAHS----SDLSSSLTADRLEFLRRKYDIPDDVHLRLPNADENFE-------NPPDGEL
        +EGS   V S D+ E  SD G  S      P +S SS    P  S    S LS  +  D +E  RRKY IP+DV LR+P  DE          N   G+L
Subjt:  SEGS---VTSPDVEESYSDDGPSSSGCFVDPEISDSSDGEPPAHS----SDLSSSLTADRLEFLRRKYDIPDDVHLRLPNADENFE-------NPPDGEL

Query:  APNGWCHLIGCFTLW-AMHGGGSLMTVDDFLSLHTINRNPAFGDLFYYASTKKG--TLISGPTSVKKWKNGWFFVSG-NW
        APN W  ++GC  +W  +  G   +T+D+ L  +   + PA    +     ++G   ++  P+S ++WK+ + FV G NW
Subjt:  APNGWCHLIGCFTLW-AMHGGGSLMTVDDFLSLHTINRNPAFGDLFYYASTKKG--TLISGPTSVKKWKNGWFFVSG-NW

A0A6J1DXS5 uncharacterized protein LOC1110255021.9e-1129.41Show/hide
Query:  DSSDGEPPAHSSDLSSSLTADRLEFLRRKYDIPDDVHLRLPNADENFENPPDG---------------------------------ELAPNGWCHLIGCF
        + SD        +  S +    L  LRR + IP+++ LRLP   E  +NPP+G                                 ++APNGW  +    
Subjt:  DSSDGEPPAHSSDLSSSLTADRLEFLRRKYDIPDDVHLRLPNADENFENPPDG---------------------------------ELAPNGWCHLIGCF

Query:  TLWAMHGGGS----LMTVDDFLSLHTINRNPAFGDLFYYASTK-KGTLISGPTSVKKWKNGWFFVSGNWLERTEDG-CFFGVPMRFG
         L+ +    S    L  VD  L+     R       FY  + K  G ++ GPTS+K W   WF+ SG WL + E G  FF VP RFG
Subjt:  TLWAMHGGGS----LMTVDDFLSLHTINRNPAFGDLFYYASTK-KGTLISGPTSVKKWKNGWFFVSGNWLERTEDG-CFFGVPMRFG

A0A7J0DK59 Uncharacterized protein6.0e-1034.62Show/hide
Query:  LTADRLEFLRRKYDIPDDVHLRLPNADENFENPP-DGELAPNGWCHLIGCFTLWAMHGGGSLMTVDDFLSLHTINRNPA--FGDLFYYASTKKGTLISGP
        +T + L  LR  Y  P  V +RLP+  EN  +    GEL PN W  +     LW ++     +++ +F +L ++N NP    G L++ A  KK  L   P
Subjt:  LTADRLEFLRRKYDIPDDVHLRLPNADENFENPP-DGELAPNGWCHLIGCFTLWAMHGGGSLMTVDDFLSLHTINRNPA--FGDLFYYASTKKGTLISGP

Query:  TSVKKWKNGWFFVSGNWLERTEDGCFFGVP
         +VK WK+ +FFVSG+  E  E     G P
Subjt:  TSVKKWKNGWFFVSGNWLERTEDGCFFGVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGCGAAGGCTCTGTTACCTCTCCGGACGTGGAGGAATCTTATTCCGATGACGGTCCCTCAAGCTCGGGCTGCTTTGTGGACCCGGAGATCTCGGATAGCAGTGA
TGGGGAGCCCCCTGCACACTCATCGGACTTATCATCCTCGTTGACCGCAGACCGCTTAGAGTTCTTGCGGCGCAAGTATGATATTCCCGACGATGTGCATCTTCGGCTCC
CTAATGCTGACGAGAACTTTGAGAATCCCCCGGATGGAGAGCTTGCTCCAAACGGGTGGTGCCACCTCATCGGTTGCTTCACCCTTTGGGCGATGCACGGTGGGGGATCT
CTAATGACCGTTGACGATTTCTTGTCCTTGCATACCATCAATCGCAATCCCGCTTTTGGTGACCTTTTTTATTACGCAAGTACCAAAAAAGGCACCTTAATCAGCGGACC
CACTTCCGTAAAAAAGTGGAAAAATGGTTGGTTCTTCGTTAGTGGCAATTGGCTTGAAAGAACGGAAGACGGTTGTTTTTTCGGGGTTCCAATGAGGTTTGGAGAATATG
GTGAGCTCTCTATTCTCCTCCCCATTGGAATCCAATCTTTGCTGCTTTTCTTTTCCTTTGCTGACTTTTCTCTTTGCTTTTCAGTACCTCGCAACGTTCGACGCTCCCCG
ACTGCTAAGAAGTTTGCCAAATACGTCCTGACCCTCGAAAAGATTAATCGCCACGGTCCCTTTTTAGTCGATCAAAGTGTCCTCGAAGCGTCTGGGCTAGCCAGGCGCCG
CACCATCAATCCTGAAGAAATGGCCTTCCGTGGAATGTATGATTCTCAGCGGAAAAGACGTGAAGCACGTAACAGGGCTGGAACCTCCCGGGCCTCTGTGGACCTAACCG
AGGATGAGACTCCACGGGTTACTGCTGAGACCTCTCGTCGTCCTGCAGCTGCTACCCGCAGAACCCGGTATCAGACGCGCTCCTCAGTCACCGAGACAGATCTTAGCACA
GGCATCCCGGTCTTTGCCCTTCCCGAGGACTACGGGAGCGGCGGCAATGAGGTAGAGGTCCTAACCCAAAACTTCATGTGCTGGCAAGGGTTGCAATCTCGGAGGCCAGA
AGGTGAGCTAGGAGTTGAGGATCCTGCCCAAGGAATGCGAGAATTCCAGAGGCACCTTCGTGATGTAAGCTCTTCTATCCCTTTGACTCAACTCTTGTTACTCCCCTCCC
TTACCTGGCTTTCCTTTTTGGGTATAGGCTTTCACGAAGGCCACTGCCTCTGCGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGCGAAGGCTCTGTTACCTCTCCGGACGTGGAGGAATCTTATTCCGATGACGGTCCCTCAAGCTCGGGCTGCTTTGTGGACCCGGAGATCTCGGATAGCAGTGA
TGGGGAGCCCCCTGCACACTCATCGGACTTATCATCCTCGTTGACCGCAGACCGCTTAGAGTTCTTGCGGCGCAAGTATGATATTCCCGACGATGTGCATCTTCGGCTCC
CTAATGCTGACGAGAACTTTGAGAATCCCCCGGATGGAGAGCTTGCTCCAAACGGGTGGTGCCACCTCATCGGTTGCTTCACCCTTTGGGCGATGCACGGTGGGGGATCT
CTAATGACCGTTGACGATTTCTTGTCCTTGCATACCATCAATCGCAATCCCGCTTTTGGTGACCTTTTTTATTACGCAAGTACCAAAAAAGGCACCTTAATCAGCGGACC
CACTTCCGTAAAAAAGTGGAAAAATGGTTGGTTCTTCGTTAGTGGCAATTGGCTTGAAAGAACGGAAGACGGTTGTTTTTTCGGGGTTCCAATGAGGTTTGGAGAATATG
GTGAGCTCTCTATTCTCCTCCCCATTGGAATCCAATCTTTGCTGCTTTTCTTTTCCTTTGCTGACTTTTCTCTTTGCTTTTCAGTACCTCGCAACGTTCGACGCTCCCCG
ACTGCTAAGAAGTTTGCCAAATACGTCCTGACCCTCGAAAAGATTAATCGCCACGGTCCCTTTTTAGTCGATCAAAGTGTCCTCGAAGCGTCTGGGCTAGCCAGGCGCCG
CACCATCAATCCTGAAGAAATGGCCTTCCGTGGAATGTATGATTCTCAGCGGAAAAGACGTGAAGCACGTAACAGGGCTGGAACCTCCCGGGCCTCTGTGGACCTAACCG
AGGATGAGACTCCACGGGTTACTGCTGAGACCTCTCGTCGTCCTGCAGCTGCTACCCGCAGAACCCGGTATCAGACGCGCTCCTCAGTCACCGAGACAGATCTTAGCACA
GGCATCCCGGTCTTTGCCCTTCCCGAGGACTACGGGAGCGGCGGCAATGAGGTAGAGGTCCTAACCCAAAACTTCATGTGCTGGCAAGGGTTGCAATCTCGGAGGCCAGA
AGGTGAGCTAGGAGTTGAGGATCCTGCCCAAGGAATGCGAGAATTCCAGAGGCACCTTCGTGATGTAAGCTCTTCTATCCCTTTGACTCAACTCTTGTTACTCCCCTCCC
TTACCTGGCTTTCCTTTTTGGGTATAGGCTTTCACGAAGGCCACTGCCTCTGCGATTAG
Protein sequenceShow/hide protein sequence
MASEGSVTSPDVEESYSDDGPSSSGCFVDPEISDSSDGEPPAHSSDLSSSLTADRLEFLRRKYDIPDDVHLRLPNADENFENPPDGELAPNGWCHLIGCFTLWAMHGGGS
LMTVDDFLSLHTINRNPAFGDLFYYASTKKGTLISGPTSVKKWKNGWFFVSGNWLERTEDGCFFGVPMRFGEYGELSILLPIGIQSLLLFFSFADFSLCFSVPRNVRRSP
TAKKFAKYVLTLEKINRHGPFLVDQSVLEASGLARRRTINPEEMAFRGMYDSQRKRREARNRAGTSRASVDLTEDETPRVTAETSRRPAAATRRTRYQTRSSVTETDLST
GIPVFALPEDYGSGGNEVEVLTQNFMCWQGLQSRRPEGELGVEDPAQGMREFQRHLRDVSSSIPLTQLLLLPSLTWLSFLGIGFHEGHCLCD