CuGenDBv2

Gene ID	Lag0041375
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Rieske domain-containing protein
Genome location	chr13:16842993..16844768
RNA-Seq Expression	Lag0041375
Synteny	Lag0041375
Gene Ontology terms	GO:0007021 - tubulin complex assembly (biological process) GO:0007023 - post-chaperonin tubulin folding pathway (biological process) GO:0042128 - nitrate assimilation (biological process) GO:0031967 - organelle envelope (cellular component) GO:0008942 - nitrite reductase [NAD(P)H] activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0048487 - beta-tubulin binding (molecular function) GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domains	IPR012748 - Rieske-like [2Fe-2S] domain, NirD-type IPR036126 - Tubulin binding cofactor A superfamily IPR036922 - Rieske [2Fe-2S] iron-sulphur domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7025185.1 hypothetical protein SDJN02_14008 [Cucurbita argyrosperma subsp. argyrosperma]

7.6e-26

85.71

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Query:  EISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        E+SVAEESS SGNWV VVPLSALP+GERRVIIQ GET+LLLWYK++IFA+ENRSPAEGAYTEGL+NAKLT
Subjt:  EISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

XP_004141552.1 uncharacterized protein LOC101206141 [Cucumis sativus]

6.9e-27

91.43

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Query:  EISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        EISVAEESS SGNWV VVPLSALPRGERRVIIQ GETILLLWYKD+IFA+ENRSPAEGAYTEGL+NAKLT
Subjt:  EISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

XP_008459624.1 PREDICTED: uncharacterized protein LOC103498694 [Cucumis melo]

6.9e-27

91.43

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Query:  EISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        EISVAEESS SGNWV VVPLSALPRGERRVIIQ GETILLLWYKD+IFA+ENRSPAEGAYTEGL+NAKLT
Subjt:  EISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

XP_022973986.1 uncharacterized protein LOC111472599 [Cucurbita maxima]

3.4e-26

87.14

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Query:  EISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        E+SVAEESS SGNWV VVPLSALP+GERRVIIQ GET+LLLWYK+KIFA+ENRSPAEGAYTEGL+NAKLT
Subjt:  EISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

XP_038891275.1 uncharacterized protein LOC120080616 [Benincasa hispida]

3.1e-27

92.86

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Query:  EISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        EISVAEESS SGNWV VVPLSALPRGERRVIIQ GETILLLWYKDKIFA+ENRSPAEGAYTEGL+NAKLT
Subjt:  EISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXX5 Rieske domain-containing protein

3.3e-27

91.43

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Query:  EISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        EISVAEESS SGNWV VVPLSALPRGERRVIIQ GETILLLWYKD+IFA+ENRSPAEGAYTEGL+NAKLT
Subjt:  EISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

A0A1S3CBV1 uncharacterized protein LOC103498694

3.3e-27

91.43

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Query:  EISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        EISVAEESS SGNWV VVPLSALPRGERRVIIQ GETILLLWYKD+IFA+ENRSPAEGAYTEGL+NAKLT
Subjt:  EISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

A0A5D3BMM3 Rieske domain-containing protein

3.3e-27

91.43

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Query:  EISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        EISVAEESS SGNWV VVPLSALPRGERRVIIQ GETILLLWYKD+IFA+ENRSPAEGAYTEGL+NAKLT
Subjt:  EISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

A0A6J1ECE7 uncharacterized protein LOC111432790

3.7e-26

85.71

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Query:  EISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        E+SVAEESS SGNWV VVPLSALP+GERRVIIQ GET+LLLWYK++IFA+ENRSPAEGAYTEGL+NAKLT
Subjt:  EISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

A0A6J1IA65 uncharacterized protein LOC111472599

1.6e-26

87.14

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Query:  EISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        E+SVAEESS SGNWV VVPLSALP+GERRVIIQ GET+LLLWYK+KIFA+ENRSPAEGAYTEGL+NAKLT
Subjt:  EISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

SwissProt top hits

e value

%identity

Alignment

O04350 Tubulin-folding cofactor A

5.7e-08

90.62

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Query:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQ
        ELHSYEKEVEREAAKTA+MK+KGAD YDLKQQ
Subjt:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G71500.1 Rieske (2Fe-2S) domain-containing protein

3.4e-24

60.44

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Query:  NFQKKKLGFLRCPSSSGTTFEISVAEESSTSG-NWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        N +++  G +RC ++     E+S +   ST G NWV VVPLSALP+GERRV+IQ  ETILLLWYK+ +FA+ENRSPAEGAY+EGL+NA+LT
Subjt:  NFQKKKLGFLRCPSSSGTTFEISVAEESSTSG-NWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

AT2G30410.1 tubulin folding cofactor A (KIESEL)

4.0e-09

90.62

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Query:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQ
        ELHSYEKEVEREAAKTA+MK+KGAD YDLKQQ
Subjt:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQ

AT2G30410.2 tubulin folding cofactor A (KIESEL)

4.0e-09

90.62

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Query:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQ
        ELHSYEKEVEREAAKTA+MK+KGAD YDLKQQ
Subjt:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQ

Sequences

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CDS sequence

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ATGTTCTACAACAGCTCACATTCAGTCAATTTTCAGAAGAAGAAATTAGGGTTTCTTCGATGCCCAAGTTCTTCAGGAACAACGTTTGAGATCTCTGTGGCCGAGGAATC
ATCGACATCTGGTAACTGGGTGCTGGTGGTTCCGTTGTCGGCGTTGCCGAGAGGGGAGCGACGCGTGATTATTCAGCGAGGTGAGACGATTTTGCTTCTTTGGTATAAGG
ATAAGATTTTTGCTCTTGAGAATAGGTCTCCTGCTGAAGGTGCTTACACTGAAGGCCTCATCAATGCCAAGCTAACGATGGTTGAACAAATTGCCCAATTGGAGTTGCAT
TCTTATGAGAAGGAGGTAGAGAGAGAAGCTGCCAAAACAGCTAACATGAAAGAAAAAGGAGCTGACCATTATGACCTTAAGCAACAGGTAGGTGCAGACATTGTTTTGGC
TGCTCAGAGTCACTTGTGA

mRNA sequence

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Protein sequence

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MFYNSSHSVNFQKKKLGFLRCPSSSGTTFEISVAEESSTSGNWVLVVPLSALPRGERRVIIQRGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLTMVEQIAQLELH
SYEKEVEREAAKTANMKEKGADHYDLKQQVGADIVLAAQSHL

Lag0041375 (gene) of Sponge gourd (AG-4) v1 genome