CuGenDBv2

Gene ID	Lag0041386
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	protein FLX-like 3
Genome location	chr13:16930979..16931491
RNA-Seq Expression	Lag0041386
Synteny	Lag0041386
Gene Ontology terms	GO:0030154 - cell differentiation (biological process)
InterPro domains	IPR040353 - FLC EXPRESSOR/FLX-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601786.1 Zinc finger protein CONSTANS-LIKE 16, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-16

32.57

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Query:  MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQ-------------------------SAA--------------------------
        MAGRNRSSRHIDGYRVSRDV RPYIDRVPAPLPIHPAALEEEL+LQ                         SAA                          
Subjt:  MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQ-------------------------SAA--------------------------

Query:  --GLKLSL--------------------------------------------------------------------------------------------
          GLKL                                                                                              
Subjt:  --GLKLSL--------------------------------------------------------------------------------------------

Query:  --------------------------GYGILNRSPEMRYAGGAYGNNYGSSWAPYEKRSRR
                                  GYGILNRSPEMRYAGGAYGN+YGSSWAPYEKRSRR
Subjt:  --------------------------GYGILNRSPEMRYAGGAYGNNYGSSWAPYEKRSRR

XP_022158741.1 protein FLX-like 3 [Momordica charantia]

3.8e-17

32.57

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Query:  MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQ-------------------------SAA--------------------------
        MAGRNRSSRHIDGYRVSRD PRPYIDRVPAPLPIHPAALEEELELQ                         SAA                          
Subjt:  MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQ-------------------------SAA--------------------------

Query:  --GLKLSL--------------------------------------------------------------------------------------------
          GLKL                                                                                              
Subjt:  --GLKLSL--------------------------------------------------------------------------------------------

Query:  --------------------------GYGILNRSPEMRYAGGAYGNNYGSSWAPYEKRSRR
                                  GYGILNRSPEMRYAGGAYGN+YGSSWAPYEKR RR
Subjt:  --------------------------GYGILNRSPEMRYAGGAYGNNYGSSWAPYEKRSRR

XP_022960852.1 protein FLX-like 3 [Cucurbita moschata]

1.1e-16

32.57

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Query:  MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQ-------------------------SAA--------------------------
        MAGRNRSSRHIDGYRVSRDV RPYIDRVPAPLPIHPAALEEEL+LQ                         SAA                          
Subjt:  MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQ-------------------------SAA--------------------------

Query:  --GLKLSL--------------------------------------------------------------------------------------------
          GLKL                                                                                              
Subjt:  --GLKLSL--------------------------------------------------------------------------------------------

Query:  --------------------------GYGILNRSPEMRYAGGAYGNNYGSSWAPYEKRSRR
                                  GYGILNRSPEMRYAGGAYGN+YGSSWAPYEKRSRR
Subjt:  --------------------------GYGILNRSPEMRYAGGAYGNNYGSSWAPYEKRSRR

XP_022971772.1 protein FLX-like 3 [Cucurbita maxima]

1.1e-16

32.57

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Query:  MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQ-------------------------SAA--------------------------
        MAGRNRSSRHIDGYRVSRDV RPYIDRVPAPLPIHPAALEEEL+LQ                         SAA                          
Subjt:  MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQ-------------------------SAA--------------------------

Query:  --GLKLSL--------------------------------------------------------------------------------------------
          GLKL                                                                                              
Subjt:  --GLKLSL--------------------------------------------------------------------------------------------

Query:  --------------------------GYGILNRSPEMRYAGGAYGNNYGSSWAPYEKRSRR
                                  GYGILNRSPEMRYAGGAYGN+YGSSWAPYEKRSRR
Subjt:  --------------------------GYGILNRSPEMRYAGGAYGNNYGSSWAPYEKRSRR

XP_023538894.1 protein FLX-like 3 [Cucurbita pepo subsp. pepo]

1.1e-16

32.57

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Query:  MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQ-------------------------SAA--------------------------
        MAGRNRSSRHIDGYRVSRDV RPYIDRVPAPLPIHPAALEEEL+LQ                         SAA                          
Subjt:  MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQ-------------------------SAA--------------------------

Query:  --GLKLSL--------------------------------------------------------------------------------------------
          GLKL                                                                                              
Subjt:  --GLKLSL--------------------------------------------------------------------------------------------

Query:  --------------------------GYGILNRSPEMRYAGGAYGNNYGSSWAPYEKRSRR
                                  GYGILNRSPEMRYAGGAYGN+YGSSWAPYEKRSRR
Subjt:  --------------------------GYGILNRSPEMRYAGGAYGNNYGSSWAPYEKRSRR

TrEMBL top hits

e value

%identity

Alignment

A0A5A7VEE6 Protein FLX-like 3

1.0e-15

95.65

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Query:  MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQ
        MAGRNRSSRHIDGYRVSRDVPR YI+RVPAPLPIHPAALEEELELQ
Subjt:  MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQ

A0A5A7VEE6 Protein FLX-like 3

2.2e-10

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Query:  EELELQSAAGLKLSLGYGILNRSPEMRYAGGAYGNNYGSSWAPYEKRSRR
        E+L ++ A GL     YGILNRSPEMRYAGGAYG++YGSSWAPYEKR+RR
Subjt:  EELELQSAAGLKLSLGYGILNRSPEMRYAGGAYGNNYGSSWAPYEKRSRR

A0A5A7VEE6 Protein FLX-like 3

1.0e-15

95.65

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Query:  MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQ
        MAGRNRSSRHIDGYRVSRDVPR YI+RVPAPLPIHPAALEEELELQ
Subjt:  MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQ

A0A6J1E1V0 protein FLX-like 3

1.8e-17

32.57

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Query:  MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQ-------------------------SAA--------------------------
        MAGRNRSSRHIDGYRVSRD PRPYIDRVPAPLPIHPAALEEELELQ                         SAA                          
Subjt:  MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQ-------------------------SAA--------------------------

Query:  --GLKLSL--------------------------------------------------------------------------------------------
          GLKL                                                                                              
Subjt:  --GLKLSL--------------------------------------------------------------------------------------------

Query:  --------------------------GYGILNRSPEMRYAGGAYGNNYGSSWAPYEKRSRR
                                  GYGILNRSPEMRYAGGAYGN+YGSSWAPYEKR RR
Subjt:  --------------------------GYGILNRSPEMRYAGGAYGNNYGSSWAPYEKRSRR

A0A6J1H8N2 protein FLX-like 3

5.4e-17

32.57

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Query:  MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQ-------------------------SAA--------------------------
        MAGRNRSSRHIDGYRVSRDV RPYIDRVPAPLPIHPAALEEEL+LQ                         SAA                          
Subjt:  MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQ-------------------------SAA--------------------------

Query:  --GLKLSL--------------------------------------------------------------------------------------------
          GLKL                                                                                              
Subjt:  --GLKLSL--------------------------------------------------------------------------------------------

Query:  --------------------------GYGILNRSPEMRYAGGAYGNNYGSSWAPYEKRSRR
                                  GYGILNRSPEMRYAGGAYGN+YGSSWAPYEKRSRR
Subjt:  --------------------------GYGILNRSPEMRYAGGAYGNNYGSSWAPYEKRSRR

A0A6J1I2W7 protein FLX-like 3

5.4e-17

32.57

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Query:  MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQ-------------------------SAA--------------------------
        MAGRNRSSRHIDGYRVSRDV RPYIDRVPAPLPIHPAALEEEL+LQ                         SAA                          
Subjt:  MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQ-------------------------SAA--------------------------

Query:  --GLKLSL--------------------------------------------------------------------------------------------
          GLKL                                                                                              
Subjt:  --GLKLSL--------------------------------------------------------------------------------------------

Query:  --------------------------GYGILNRSPEMRYAGGAYGNNYGSSWAPYEKRSRR
                                  GYGILNRSPEMRYAGGAYGN+YGSSWAPYEKRSRR
Subjt:  --------------------------GYGILNRSPEMRYAGGAYGNNYGSSWAPYEKRSRR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGCAGGGAGAAATCGCTCATCACGCCACATTGATGGTTACCGAGTTTCCCGTGATGTCCCTAGACCCTACATAGACCGAGTGCCAGCACCCCTGCCTATTCATCCTGC
AGCTTTGGAGGAGGAACTTGAATTGCAAAGCGCGGCTGGGTTAAAATTAAGTTTGGGTTATGGGATCTTGAACAGAAGTCCTGAAATGAGATATGCAGGTGGTGCATATG
GTAATAACTATGGTAGTTCTTGGGCACCATATGAGAAGCGTAGCCGACGTTAA

mRNA sequence

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Protein sequence

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MAGRNRSSRHIDGYRVSRDVPRPYIDRVPAPLPIHPAALEEELELQSAAGLKLSLGYGILNRSPEMRYAGGAYGNNYGSSWAPYEKRSRR

Lag0041386 (gene) of Sponge gourd (AG-4) v1 genome