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Lag0041423 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041423
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA helicase
Genome locationchr13:17536995..17537509
RNA-Seq ExpressionLag0041423
SyntenyLag0041423
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006268 - DNA unwinding involved in DNA replication (biological process)
GO:0015074 - DNA integration (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005694 - chromosome (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0009378 - four-way junction helicase activity (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0043138 - 3'-5' DNA helicase activity (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456059.1 PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X2 [Cucumis melo]1.2e-3192.86Show/hide
Query:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ
        EDVVQALGL+NCIIFR SFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSR+DCEKVAE  Q
Subjt:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ

XP_008456060.1 PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X3 [Cucumis melo]1.2e-3192.86Show/hide
Query:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ
        EDVVQALGL+NCIIFR SFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSR+DCEKVAE  Q
Subjt:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ

XP_008456062.1 PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X5 [Cucumis melo]1.2e-3192.86Show/hide
Query:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ
        EDVVQALGL+NCIIFR SFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSR+DCEKVAE  Q
Subjt:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ

XP_011651280.1 ATP-dependent DNA helicase Q-like 4A isoform X1 [Cucumis sativus]1.2e-3192.86Show/hide
Query:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ
        EDVVQALGL+NCIIFR SFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSR+DCEKVAE  Q
Subjt:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ

XP_018842035.1 ATP-dependent DNA helicase Q-like 4A [Juglans regia]1.2e-3191.43Show/hide
Query:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ
        EDVVQALGLVNCI+FR SFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGI+YCLSR+DCEKVAE  Q
Subjt:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ

TrEMBL top hitse value%identityAlignment
A0A0A0L762 DNA helicase5.7e-3292.86Show/hide
Query:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ
        EDVVQALGL+NCIIFR SFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSR+DCEKVAE  Q
Subjt:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ

A0A1S3C2C0 DNA helicase5.7e-3292.86Show/hide
Query:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ
        EDVVQALGL+NCIIFR SFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSR+DCEKVAE  Q
Subjt:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ

A0A1S3C321 ATP-dependent DNA helicase5.7e-3292.86Show/hide
Query:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ
        EDVVQALGL+NCIIFR SFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSR+DCEKVAE  Q
Subjt:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ

A0A2I4GDQ8 DNA helicase5.7e-3291.43Show/hide
Query:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ
        EDVVQALGLVNCI+FR SFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGI+YCLSR+DCEKVAE  Q
Subjt:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ

A0A5D3DFS4 DNA helicase5.7e-3292.86Show/hide
Query:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ
        EDVVQALGL+NCIIFR SFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSR+DCEKVAE  Q
Subjt:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ

SwissProt top hitse value%identityAlignment
A8WK63 Putative ATP-dependent DNA helicase Q14.8e-1238.78Show/hide
Query:  GMISGQISRALEDVVQALGLVNCIIFRHSFNRPNLWYSVIPK---TKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQVGFLSLLVYLEYLQ
        G+ +   S  L+DV + LG+   I+FR  FNR NL Y V+ K     +CV+ I + IK     + GI+YCLSR DCEK+A+S +   +    Y  Y++
Subjt:  GMISGQISRALEDVVQALGLVNCIIFRHSFNRPNLWYSVIPK---TKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQVGFLSLLVYLEYLQ

Q09811 ATP-dependent DNA helicase hus2/rqh11.4e-1145.45Show/hide
Query:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVA
        +D++  L + NC+  + SFNRPNL+Y + PK K    ++ +FI   H  E GI+YCLSR  CE+VA
Subjt:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVA

Q8L840 ATP-dependent DNA helicase Q-like 4A4.9e-3384.29Show/hide
Query:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ
        EDVVQALGLVNC++FR SFNRPNLWYSV+PKTKKC++DIDKFIKENHFDECGI+YCLSR+DCEKV+E  Q
Subjt:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ

Q9FT70 ATP-dependent DNA helicase Q-like 4B3.2e-3280.28Show/hide
Query:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQV
        EDVVQALGLVNC++FR SFNRPNLWYSV+PKT KC++DIDKFI+ENHFDECGI+YCLSR+DCEKV E+ +V
Subjt:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQV

Q9TXJ8 Putative ATP-dependent DNA helicase Q18.2e-1237.76Show/hide
Query:  GMISGQISRALEDVVQALGLVNCIIFRHSFNRPNLWYSVIPK---TKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQVGFLSLLVYLEYLQ
        G+ +   S  L+DV   LG+   + FR  FNR NL Y V+ K     +C ++I K IK +   + GI+YCLSR DCEKVA++ +   +    Y  Y++
Subjt:  GMISGQISRALEDVVQALGLVNCIIFRHSFNRPNLWYSVIPK---TKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQVGFLSLLVYLEYLQ

Arabidopsis top hitse value%identityAlignment
AT1G10930.1 DNA helicase (RECQl4A)3.5e-3484.29Show/hide
Query:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ
        EDVVQALGLVNC++FR SFNRPNLWYSV+PKTKKC++DIDKFIKENHFDECGI+YCLSR+DCEKV+E  Q
Subjt:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQ

AT1G31360.1 RECQ helicase L29.3e-1146.38Show/hide
Query:  DVVQALGLVNCIIFRHSFNRPNLWYSVIPKT---KKCVDDIDKFIKENHF-DECGIVYCLSRLDCEKVA
        D+++ L +  C+ F  S NRPNL+YSV  K+   K  VD+I +FI+E++  +E GIVYC SR +CE++A
Subjt:  DVVQALGLVNCIIFRHSFNRPNLWYSVIPKT---KKCVDDIDKFIKENHF-DECGIVYCLSRLDCEKVA

AT1G31360.2 RECQ helicase L29.3e-1146.38Show/hide
Query:  DVVQALGLVNCIIFRHSFNRPNLWYSVIPKT---KKCVDDIDKFIKENHF-DECGIVYCLSRLDCEKVA
        D+++ L +  C+ F  S NRPNL+YSV  K+   K  VD+I +FI+E++  +E GIVYC SR +CE++A
Subjt:  DVVQALGLVNCIIFRHSFNRPNLWYSVIPKT---KKCVDDIDKFIKENHF-DECGIVYCLSRLDCEKVA

AT1G60930.1 RECQ helicase L4B2.3e-3380.28Show/hide
Query:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQV
        EDVVQALGLVNC++FR SFNRPNLWYSV+PKT KC++DIDKFI+ENHFDECGI+YCLSR+DCEKV E+ +V
Subjt:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQV

AT3G05740.1 RECQ helicase l18.7e-0937.31Show/hide
Query:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAE
        +DV+++L +    + + SF+R NL Y VI KTK+ +  + + +++   D+ GIVYCLS+ +C  VA+
Subjt:  EDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGAATTGTCATGGATGAAGCACATTGCGTTAGTCAGTGGGGGCATGATTTCAGGCCAGATTAGCAGGGCCTTGGAGGATGTTGTGCAAGCTCTTGGACTTGTTAA
CTGCATCATTTTCCGTCATAGTTTCAATCGGCCAAATTTATGGTACTCTGTGATTCCAAAGACTAAGAAATGCGTGGATGATATTGATAAGTTCATCAAAGAAAACCACT
TTGATGAATGTGGGATTGTTTACTGTCTTTCAAGACTGGACTGTGAAAAGGTTGCTGAAAGTTTTCAGGTTGGTTTCCTCAGTCTTCTTGTATACCTGGAATATCTACAA
TTGGATGGTGGATTTTTCAGATATATAGGAAGACTATTCAAAACAGCTTGTGCCAAGGTAATCCTTCCCCCTTTAGAGATGGGAAACTTCTGCCATTTGCCAAGCTTCCG
CTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGAGAATTGTCATGGATGAAGCACATTGCGTTAGTCAGTGGGGGCATGATTTCAGGCCAGATTAGCAGGGCCTTGGAGGATGTTGTGCAAGCTCTTGGACTTGTTAA
CTGCATCATTTTCCGTCATAGTTTCAATCGGCCAAATTTATGGTACTCTGTGATTCCAAAGACTAAGAAATGCGTGGATGATATTGATAAGTTCATCAAAGAAAACCACT
TTGATGAATGTGGGATTGTTTACTGTCTTTCAAGACTGGACTGTGAAAAGGTTGCTGAAAGTTTTCAGGTTGGTTTCCTCAGTCTTCTTGTATACCTGGAATATCTACAA
TTGGATGGTGGATTTTTCAGATATATAGGAAGACTATTCAAAACAGCTTGTGCCAAGGTAATCCTTCCCCCTTTAGAGATGGGAAACTTCTGCCATTTGCCAAGCTTCCG
CTGA
Protein sequenceShow/hide protein sequence
MRELSWMKHIALVSGGMISGQISRALEDVVQALGLVNCIIFRHSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRLDCEKVAESFQVGFLSLLVYLEYLQ
LDGGFFRYIGRLFKTACAKVILPPLEMGNFCHLPSFR