; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041424 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041424
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSEC12-like protein 2
Genome locationchr13:17553308..17553782
RNA-Seq ExpressionLag0041424
SyntenyLag0041424
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601644.1 SEC12-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3582Show/hide
Query:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP
        ME P+ SNSRKYGVPFYAAAW+PS SLK E+E  ESEIDRDQSGD D  A+DK+L S PTTAVNYYVAAAGGGGEGRSGISNALILAHFD ESR+LSDQP
Subjt:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP

XP_022957331.1 SEC12-like protein 2 [Cucurbita moschata]2.1e-3581Show/hide
Query:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP
        ME P+ SNSRKYGVPFYAAAW+PS SLK E+E  ESEIDRDQSGD D SA D++L S PTTAV+YYVAAAGGGGEGRSGISNALILAHFD ESR+LSDQP
Subjt:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP

XP_022998007.1 SEC12-like protein 2 [Cucurbita maxima]1.6e-3582.35Show/hide
Query:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDN--SANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSD
        ME P+ SNSRKYGVPFYAAAW+PS SLK EQE  ESEIDRDQSGD D   SA+DK+L S PTTAVNYYVAAAGGGGEGRSGISNALILAHFD ESR+LSD
Subjt:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDN--SANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSD

Query:  QP
        QP
Subjt:  QP

XP_023547354.1 SEC12-like protein 2 [Cucurbita pepo subsp. pepo]1.0e-3480.39Show/hide
Query:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDN--SANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSD
        ME P+ SNSRKYGVPFYAAAW+PS SLK E+E  ESEIDRDQSGD D   SA+DK+  S PTTAVNYYVAAAGGGGEGRSGISNALILAHFD ESR+LSD
Subjt:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDN--SANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSD

Query:  QP
        QP
Subjt:  QP

XP_038892140.1 SEC12-like protein 2 [Benincasa hispida]5.2e-3176.24Show/hide
Query:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDNSAND-KSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQ
        ME P  SNSRKYG+PFYA AWLPS SLK +QEP ESE   DQS D D SA+D KSL S P TA NYYVAA GGGGEGRSGISNALILAHFD ESR+LSDQ
Subjt:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDNSAND-KSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQ

Query:  P
        P
Subjt:  P

TrEMBL top hitse value%identityAlignment
A0A6J1DBY0 SEC12-like protein 24.8e-3074.75Show/hide
Query:  ETPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP
        +TPD SNSRKYGVPFYAAAW+P  S+K E EP  SE D +QSGDD     DKSL    TTAV+YYVAAAGGGGEGRSGISNALILAHFD ESR+LSDQP
Subjt:  ETPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP

A0A6J1FTE5 SEC12-like protein 22.4e-2973.27Show/hide
Query:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDR-DQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQ
        METPD S SRKYGVPFYAAAWLP  SL   QEP +SE D  DQS D   SAN KS  S PT A+NYY+AAAGGGGEGRSGISNAL+LA+FD ESR+LSDQ
Subjt:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDR-DQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQ

Query:  P
        P
Subjt:  P

A0A6J1GYX6 SEC12-like protein 21.0e-3581Show/hide
Query:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP
        ME P+ SNSRKYGVPFYAAAW+PS SLK E+E  ESEIDRDQSGD D SA D++L S PTTAV+YYVAAAGGGGEGRSGISNALILAHFD ESR+LSDQP
Subjt:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP

A0A6J1J4E0 SEC12-like protein 24.1e-2972.28Show/hide
Query:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDR-DQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQ
        METPD SNSRKYGVPFYAAAWLP  SL   QEP +SE D  DQS D   SAN KS  S PT A+NYY+AAAGGGGEGRSGISNAL+LA+FD +SR+LS Q
Subjt:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDR-DQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQ

Query:  P
        P
Subjt:  P

A0A6J1K6N4 SEC12-like protein 27.6e-3682.35Show/hide
Query:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDN--SANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSD
        ME P+ SNSRKYGVPFYAAAW+PS SLK EQE  ESEIDRDQSGD D   SA+DK+L S PTTAVNYYVAAAGGGGEGRSGISNALILAHFD ESR+LSD
Subjt:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDN--SANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSD

Query:  QP
        QP
Subjt:  QP

SwissProt top hitse value%identityAlignment
Q39221 SEC12-like protein 22.2e-1138.74Show/hide
Query:  ETPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQPE
        ET   SN + YGVP YAA W+P   ++      +  +D ++S DDD S++  S S          +  +GGGGEGRSGISN +++   DL + +LS+QP 
Subjt:  ETPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQPE

Query:  MLGIFIISSML
         LG  ++ S L
Subjt:  MLGIFIISSML

Arabidopsis top hitse value%identityAlignment
AT2G01470.1 SEC12P-like 2 protein1.5e-1238.74Show/hide
Query:  ETPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQPE
        ET   SN + YGVP YAA W+P   ++      +  +D ++S DDD S++  S S          +  +GGGGEGRSGISN +++   DL + +LS+QP 
Subjt:  ETPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQPE

Query:  MLGIFIISSML
         LG  ++ S L
Subjt:  MLGIFIISSML

AT5G50550.1 Transducin/WD40 repeat-like superfamily protein1.4e-1038.3Show/hide
Query:  SNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP
        SN + YGVP YA  W+        +E   S+I +DQ  DDD+ ++  S           Y+  +GGGGEGRSGI N +++   DL + +LS+QP
Subjt:  SNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP

AT5G50650.1 Transducin/WD40 repeat-like superfamily protein1.4e-1038.3Show/hide
Query:  SNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP
        SN + YGVP YA  W+        +E   S+I +DQ  DDD+ ++  S           Y+  +GGGGEGRSGI N +++   DL + +LS+QP
Subjt:  SNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACTCCCGACTGTTCCAATTCCCGCAAGTATGGTGTCCCTTTCTACGCAGCCGCTTGGCTGCCTTCCGCTTCCCTCAAATACGAGCAGGAGCCTCAAGAATCTGA
AATTGATCGAGATCAATCCGGTGATGATGACAATTCTGCCAACGACAAATCTCTTTCATCTCAGCCAACCACCGCAGTTAATTACTACGTAGCCGCCGCTGGCGGTGGTG
GAGAAGGTCGGAGTGGAATTTCCAATGCCCTCATACTTGCTCATTTCGATTTGGAATCCCGCACGCTCTCTGATCAGCCTGAAATGCTTGGAATTTTTATCATTTCGTCT
ATGTTATTGAGTGAAGCAGAAATGGGGCGGGATAATGAATTTTCTTCGATTGTTGATTCTCTTGCTCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAACTCCCGACTGTTCCAATTCCCGCAAGTATGGTGTCCCTTTCTACGCAGCCGCTTGGCTGCCTTCCGCTTCCCTCAAATACGAGCAGGAGCCTCAAGAATCTGA
AATTGATCGAGATCAATCCGGTGATGATGACAATTCTGCCAACGACAAATCTCTTTCATCTCAGCCAACCACCGCAGTTAATTACTACGTAGCCGCCGCTGGCGGTGGTG
GAGAAGGTCGGAGTGGAATTTCCAATGCCCTCATACTTGCTCATTTCGATTTGGAATCCCGCACGCTCTCTGATCAGCCTGAAATGCTTGGAATTTTTATCATTTCGTCT
ATGTTATTGAGTGAAGCAGAAATGGGGCGGGATAATGAATTTTCTTCGATTGTTGATTCTCTTGCTCACTAG
Protein sequenceShow/hide protein sequence
METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESEIDRDQSGDDDNSANDKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQPEMLGIFIISS
MLLSEAEMGRDNEFSSIVDSLAH