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Lag0041425 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041425
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr13:17553901..17555818
RNA-Seq ExpressionLag0041425
SyntenyLag0041425
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4303756.1 unnamed protein product [Prunus armeniaca]5.8e-0934.11Show/hide
Query:  PPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPWIIIKSDSTEAIVILNHESQDFIEVRS
        PPP L  K+N +A+WS  +  GG+GW+ RDS G   C G Q  +   S   +E+ AI  +L             II++SDS + I++LN  +    ++  
Subjt:  PPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPWIIIKSDSTEAIVILNHESQDFIEVRS

Query:  LGDEVESLVAAVGGVSFSFSRRENNLEAH
        +  ++  LVA++  VSF F+ R  N  AH
Subjt:  LGDEVESLVAAVGGVSFSFSRRENNLEAH

XP_013694754.1 uncharacterized protein LOC106398790 [Brassica napus]3.1e-1029.11Show/hide
Query:  IWQHRNAVKNKIAKPDHNMIILAIEGNGAPPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSP
        +W+ R  VK K  KP    I    E    PPP    K NT+A+W ++ ++GG+GW+ RD NG     G +++    S+   EM+A+  ++R+L    G  
Subjt:  IWQHRNAVKNKIAKPDHNMIILAIEGNGAPPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSP

Query:  FPWIIIKSDSTEAIVILNHESQDFIEVRSLGDEVESLVAAVGGVSFSFSRRENNLEAH
        +  +  +SDS   + +LN+E + +  V+ +   + S  + +  V  ++  R  N  AH
Subjt:  FPWIIIKSDSTEAIVILNHESQDFIEVRSLGDEVESLVAAVGGVSFSFSRRENNLEAH

XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]1.9e-1234.52Show/hide
Query:  VKNKIAKPDHNMIILAIEGNGA---PPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPWI
        +K K    D ++I    +  GA   PP    WKLNTNA+W  D   GGIGWI RD  G       + +    +I  LE+ AI E LR++      P   I
Subjt:  VKNKIAKPDHNMIILAIEGNGA---PPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPWI

Query:  IIKSDSTEAIVILNHESQDFIEVRSLGDEVESLVAAVGGVSFSFSRRENNLEAHFLVQMAYTHSNGED
         ++SDS EAI +L+ + QD  E+  L +E+  ++  +  VS     RE N  AH L + A  +   E+
Subjt:  IIKSDSTEAIVILNHESQDFIEVRSLGDEVESLVAAVGGVSFSFSRRENNLEAHFLVQMAYTHSNGED

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]5.2e-1036.3Show/hide
Query:  PPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPWIIIKSDSTEAIVILNHESQDFIEVRS
        PPP   W LN +ASWS     GGIGWI R  +G     G + V    ++K LE  AI+E LR+ L  +G   P + I++DS E   +LN + +D  +   
Subjt:  PPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPWIIIKSDSTEAIVILNHESQDFIEVRS

Query:  LGDEVESLVAAVGGVSFSFSRRENNLEAHFLVQMA
        + +E+ +L  +   ++F+   RE N  AH L Q A
Subjt:  LGDEVESLVAAVGGVSFSFSRRENNLEAHFLVQMA

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]1.2e-1133.53Show/hide
Query:  VKNKIAKPDHNMIILAIEGNGA---PPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPW-
        +K K A  D ++I    +  GA   PP    WKLNT+A+W  D   GGIGWI RD  G       + +    +I  LE+ AI E LR++      P    
Subjt:  VKNKIAKPDHNMIILAIEGNGA---PPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPW-

Query:  ----IIIKSDSTEAIVILNHESQDFIEVRSLGDEVESLVAAVGGVSFSFSRRENNLEAHFLVQMAYTHSNGED
            I ++SDS EAI +L+ + QD  E+  L +E+  ++  +  VS     RE N  AH L + A  +   E+
Subjt:  ----IIIKSDSTEAIVILNHESQDFIEVRSLGDEVESLVAAVGGVSFSFSRRENNLEAHFLVQMAYTHSNGED

TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134129.3e-1334.52Show/hide
Query:  VKNKIAKPDHNMIILAIEGNGA---PPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPWI
        +K K    D ++I    +  GA   PP    WKLNTNA+W  D   GGIGWI RD  G       + +    +I  LE+ AI E LR++      P   I
Subjt:  VKNKIAKPDHNMIILAIEGNGA---PPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPWI

Query:  IIKSDSTEAIVILNHESQDFIEVRSLGDEVESLVAAVGGVSFSFSRRENNLEAHFLVQMAYTHSNGED
         ++SDS EAI +L+ + QD  E+  L +E+  ++  +  VS     RE N  AH L + A  +   E+
Subjt:  IIKSDSTEAIVILNHESQDFIEVRSLGDEVESLVAAVGGVSFSFSRRENNLEAHFLVQMAYTHSNGED

A0A6J1DNV9 uncharacterized protein LOC1110224032.5e-1036.3Show/hide
Query:  PPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPWIIIKSDSTEAIVILNHESQDFIEVRS
        PPP   W LN +ASWS     GGIGWI R  +G     G + V    ++K LE  AI+E LR+ L  +G   P + I++DS E   +LN + +D  +   
Subjt:  PPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPWIIIKSDSTEAIVILNHESQDFIEVRS

Query:  LGDEVESLVAAVGGVSFSFSRRENNLEAHFLVQMA
        + +E+ +L  +   ++F+   RE N  AH L Q A
Subjt:  LGDEVESLVAAVGGVSFSFSRRENNLEAHFLVQMA

A0A6J1DSV1 uncharacterized protein LOC1110236086.0e-1233.53Show/hide
Query:  VKNKIAKPDHNMIILAIEGNGA---PPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPW-
        +K K A  D ++I    +  GA   PP    WKLNT+A+W  D   GGIGWI RD  G       + +    +I  LE+ AI E LR++      P    
Subjt:  VKNKIAKPDHNMIILAIEGNGA---PPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPW-

Query:  ----IIIKSDSTEAIVILNHESQDFIEVRSLGDEVESLVAAVGGVSFSFSRRENNLEAHFLVQMAYTHSNGED
            I ++SDS EAI +L+ + QD  E+  L +E+  ++  +  VS     RE N  AH L + A  +   E+
Subjt:  ----IIIKSDSTEAIVILNHESQDFIEVRSLGDEVESLVAAVGGVSFSFSRRENNLEAHFLVQMAYTHSNGED

A0A6J5WPU6 Reverse transcriptase domain-containing protein2.8e-0934.11Show/hide
Query:  PPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPWIIIKSDSTEAIVILNHESQDFIEVRS
        PPP L  K+N +A+WS  +  GG+GW+ RDS G   C G Q  +   S   +E+ AI  +L             II++SDS + I++LN  +    ++  
Subjt:  PPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPWIIIKSDSTEAIVILNHESQDFIEVRS

Query:  LGDEVESLVAAVGGVSFSFSRRENNLEAH
        +  ++  LVA++  VSF F+ R  N  AH
Subjt:  LGDEVESLVAAVGGVSFSFSRRENNLEAH

A0A6J5YDN0 Uncharacterized protein1.1e-0833.33Show/hide
Query:  PPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPWIIIKSDSTEAIVILNHESQDFIEVRS
        PPP L  K+N +A+WS  +  GG+GW+ RDS     C G Q  +   S   +E+ AI  +L             II++SDS + I++LN  +    ++  
Subjt:  PPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPWIIIKSDSTEAIVILNHESQDFIEVRS

Query:  LGDEVESLVAAVGGVSFSFSRRENNLEAH
        +  ++  LVA++  VSF F+ R  N  AH
Subjt:  LGDEVESLVAAVGGVSFSFSRRENNLEAH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.9e-0824.86Show/hide
Query:  RRKSKNLHIWQHRNAVKNKIAKP--DHNMIILAIEGNGAPPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESL
        RR  ++   W  R  ++ K + P  + N+ +         PP+ + K NT+A+W  +    GIGWI R+ +G    +G + + +  ++    ++A +E+L
Subjt:  RRKSKNLHIWQHRNAVKNKIAKP--DHNMIILAIEGNGAPPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESL

Query:  R-SLLVRIGSPFPWIIIKSDSTEAIVILNHESQDF-IEVRSLGDEVESLVAAVGGVSFSFSRRENNLEAHFLVQMAYTHSN
        R ++L      +  II +SD+   + +LN  S DF   ++   ++++ L+     V F F+ R  N  A  + + + + SN
Subjt:  R-SLLVRIGSPFPWIIIKSDSTEAIVILNHESQDF-IEVRSLGDEVESLVAAVGGVSFSFSRRENNLEAHFLVQMAYTHSN

AT4G29090.1 Ribonuclease H-like superfamily protein1.3e-1127.68Show/hide
Query:  RRKSKNLHIWQHRNAVKNKIAKPDHNMIILAIEGNGAPPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRS
        RR   +L  W+ R   ++   KP  N    +  G   PPPH + K NT+A+W++D +  GIGW+ R+  G    +G + + K  S+   E++A+  ++ S
Subjt:  RRKSKNLHIWQHRNAVKNKIAKPDHNMIILAIEGNGAPPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRS

Query:  LLVRIGSPFPWIIIKSDSTEAIVILNHESQDFIEVRSLGDEVESLVAAVGGVSFSFSRRENNLEAHFLVQMAYTHSN
        L       + ++I +SDS   I ILN++ + +  ++    +++ L++    V F F  RE N  A  + + + +  N
Subjt:  LLVRIGSPFPWIIIKSDSTEAIVILNHESQDFIEVRSLGDEVESLVAAVGGVSFSFSRRENNLEAHFLVQMAYTHSN

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.2e-0524.26Show/hide
Query:  APPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPWIIIKSDSTEAIVILNHESQDFIEVR
        +PP     K N +AS  +   + G+GWI R+S G+    G  K     + +  E   ++ ++++     G     +I + D+     ++N +S +   ++
Subjt:  APPPHLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPWIIIKSDSTEAIVILNHESQDFIEVR

Query:  SLGDEVESLVAAVGGVSFSFSRRENNLEAHFLVQMA
           D ++S + +   + FSF  RE N  A FL + A
Subjt:  SLGDEVESLVAAVGGVSFSFSRRENNLEAHFLVQMA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTATTGTTAAACAAGAGTGCTTATTTCTTAGCTCAAAATGCTACTGCAGCTGGGAAGCTTCATCTTCGGACTCGTCGACCACAAAAGCTTTCTGGAAGGATTTT
TGGAAAGCTAAGCTCCAAAGCAGAATCGAAAAATCACATCTTTTGGGAATGCAAGGGGAGATCGGGACTTGATGGGAATATGGAGAAGGATTGTGAACAAAGAAGAAAAA
GCAAAAATTTGCACATATGGCAACATAGAAACGCAGTGAAAAACAAGATTGCAAAGCCAGACCACAACATGATTATCCTAGCCATAGAAGGGAATGGGGCGCCTCCTCCT
CACCTATTCTGGAAATTGAATACTAATGCATCTTGGTCAAAAGACAAAAAGTTGGGGGGCATTGGATGGATTGCCCGTGACTCAAATGGATCTTTCTTTTGCGTAGGATT
CCAAAAGGTAATCAAGAATTGGTCGATCAAATGCCTGGAGATGAAAGCGATTATGGAGAGTTTGAGAAGCTTACTTGTTCGGATTGGTAGTCCATTCCCGTGGATCATCA
TCAAATCAGATTCTACTGAAGCAATTGTCATCCTCAACCACGAATCTCAAGACTTCATAGAGGTGCGTTCTTTGGGGGATGAAGTGGAATCATTGGTGGCGGCAGTGGGA
GGTGTTTCCTTCTCTTTCAGTCGACGGGAAAACAACTTGGAAGCACACTTTCTGGTGCAAATGGCTTACACCCACTCTAATGGGGAAGATTCTAGCTCAAATTTCTTGGC
AGAAGAAGAGGGAAACCTAGCTGACGCCACTTCTTCTTCTTCACCGCCGCATCTCTCCCGTTCGCTGCCGCGCCGCCGCCATCGTCGTCTTTCTTCCGTTCGTGCCGCCG
CAGCCTCCTTCGATTTTATACTACCTTGCTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTATTGTTAAACAAGAGTGCTTATTTCTTAGCTCAAAATGCTACTGCAGCTGGGAAGCTTCATCTTCGGACTCGTCGACCACAAAAGCTTTCTGGAAGGATTTT
TGGAAAGCTAAGCTCCAAAGCAGAATCGAAAAATCACATCTTTTGGGAATGCAAGGGGAGATCGGGACTTGATGGGAATATGGAGAAGGATTGTGAACAAAGAAGAAAAA
GCAAAAATTTGCACATATGGCAACATAGAAACGCAGTGAAAAACAAGATTGCAAAGCCAGACCACAACATGATTATCCTAGCCATAGAAGGGAATGGGGCGCCTCCTCCT
CACCTATTCTGGAAATTGAATACTAATGCATCTTGGTCAAAAGACAAAAAGTTGGGGGGCATTGGATGGATTGCCCGTGACTCAAATGGATCTTTCTTTTGCGTAGGATT
CCAAAAGGTAATCAAGAATTGGTCGATCAAATGCCTGGAGATGAAAGCGATTATGGAGAGTTTGAGAAGCTTACTTGTTCGGATTGGTAGTCCATTCCCGTGGATCATCA
TCAAATCAGATTCTACTGAAGCAATTGTCATCCTCAACCACGAATCTCAAGACTTCATAGAGGTGCGTTCTTTGGGGGATGAAGTGGAATCATTGGTGGCGGCAGTGGGA
GGTGTTTCCTTCTCTTTCAGTCGACGGGAAAACAACTTGGAAGCACACTTTCTGGTGCAAATGGCTTACACCCACTCTAATGGGGAAGATTCTAGCTCAAATTTCTTGGC
AGAAGAAGAGGGAAACCTAGCTGACGCCACTTCTTCTTCTTCACCGCCGCATCTCTCCCGTTCGCTGCCGCGCCGCCGCCATCGTCGTCTTTCTTCCGTTCGTGCCGCCG
CAGCCTCCTTCGATTTTATACTACCTTGCTGTTAA
Protein sequenceShow/hide protein sequence
MALLLNKSAYFLAQNATAAGKLHLRTRRPQKLSGRIFGKLSSKAESKNHIFWECKGRSGLDGNMEKDCEQRRKSKNLHIWQHRNAVKNKIAKPDHNMIILAIEGNGAPPP
HLFWKLNTNASWSKDKKLGGIGWIARDSNGSFFCVGFQKVIKNWSIKCLEMKAIMESLRSLLVRIGSPFPWIIIKSDSTEAIVILNHESQDFIEVRSLGDEVESLVAAVG
GVSFSFSRRENNLEAHFLVQMAYTHSNGEDSSSNFLAEEEGNLADATSSSSPPHLSRSLPRRRHRRLSSVRAAAASFDFILPCC