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Lag0041446 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041446
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr13:18022935..18023369
RNA-Seq ExpressionLag0041446
SyntenyLag0041446
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039149.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]1.2e-2543.62Show/hide
Query:  MSSNFEIWVDDMFSSKIVLQSAIRSYC----HQRQLSIQNRDILVVQCVVEDCEWFLRA-CQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLR
        + SNF + V DMFSSK + +  I++       Q  +   N++++++QC +E+C+W LRA C   GD SL WV+ RFD +HT S+DV LTDH +     ++
Subjt:  MSSNFEIWVDDMFSSKIVLQSAIRSYC----HQRQLSIQNRDILVVQCVVEDCEWFLRA-CQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLR

Query:  IVLSEKISIAVSELPTPKDIISFIQSEYGLHISYQKVWRAREATLNEFR
         ++  KIS+A S+L TPK+I+ FI  E+GL ISYQK WRA +  L++ R
Subjt:  IVLSEKISIAVSELPTPKDIISFIQSEYGLHISYQKVWRAREATLNEFR
KAA0060121.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]1.6e-2542.28Show/hide
Query:  MSSNFEIWVDDMFSSKIVLQSAIRSYC----HQRQLSIQNRDILVVQCVVEDCEWFLRA-CQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLR
        + SNF + V DMFS+K + +  +++       Q  +   N++++++QC +E+C+W LRA C   GD SL WV+ RFDS+HTC +DV L+D+ +      +
Subjt:  MSSNFEIWVDDMFSSKIVLQSAIRSYC----HQRQLSIQNRDILVVQCVVEDCEWFLRA-CQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLR

Query:  IVLSEKISIAVSELPTPKDIISFIQSEYGLHISYQKVWRAREATLNEFR
         ++  KIS+A  EL T KDI+ FI++E+GL ISYQK WRA E  L++ R
Subjt:  IVLSEKISIAVSELPTPKDIISFIQSEYGLHISYQKVWRAREATLNEFR
XP_008441658.1 PREDICTED: uncharacterized protein LOC103485740 [Cucumis melo]3.3e-2350Show/hide
Query:  NRDILVVQCVVEDCEWFLR-ACQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLRIVLSEKISIAVSELPTPKDIISFIQSEYGLHISYQKVWR
        N++++++QC +E+C+W LR +C    D  L WV+ RFDS+HTCSIDV LTDH       ++ ++  KIS+  SEL TPKDI+ FI++E+ L ISYQK WR
Subjt:  NRDILVVQCVVEDCEWFLR-ACQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLRIVLSEKISIAVSELPTPKDIISFIQSEYGLHISYQKVWR

Query:  AREATLNE
        ARE  L++
Subjt:  AREATLNE
XP_008452162.1 PREDICTED: uncharacterized protein LOC103493267 [Cucumis melo]4.7e-2542.28Show/hide
Query:  MSSNFEIWVDDMFSSKIVLQSAIRSYC----HQRQLSIQNRDILVVQCVVEDCEWFLRA-CQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLR
        + SNF + V DMFS+K + +  ++        Q      N +++++QCV+E+C+W L A C   GD S+ WV+ RFDS+ TCS+D  LTDH +     ++
Subjt:  MSSNFEIWVDDMFSSKIVLQSAIRSYC----HQRQLSIQNRDILVVQCVVEDCEWFLRA-CQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLR

Query:  IVLSEKISIAVSELPTPKDIISFIQSEYGLHISYQKVWRAREATLNEFR
         ++  KI +A S+L TPKDI+ FI  E+GL I YQK WRAR A L++ R
Subjt:  IVLSEKISIAVSELPTPKDIISFIQSEYGLHISYQKVWRAREATLNEFR
XP_008463110.1 PREDICTED: uncharacterized protein LOC103501336 [Cucumis melo]1.2e-2543.62Show/hide
Query:  MSSNFEIWVDDMFSSKIVLQSAIRSYC----HQRQLSIQNRDILVVQCVVEDCEWFLRA-CQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLR
        + SNF + V DMFSSK + +  I++       Q  +   N++++++QC +E+C+W LRA C   GD SL WV+ RFD +HT S+DV LTDH +     ++
Subjt:  MSSNFEIWVDDMFSSKIVLQSAIRSYC----HQRQLSIQNRDILVVQCVVEDCEWFLRA-CQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLR

Query:  IVLSEKISIAVSELPTPKDIISFIQSEYGLHISYQKVWRAREATLNEFR
         ++  KIS+A S+L TPK+I+ FI  E+GL ISYQK WRA +  L++ R
Subjt:  IVLSEKISIAVSELPTPKDIISFIQSEYGLHISYQKVWRAREATLNEFR
TrEMBL top hitse value%identityAlignment
A0A1S3B4K4 uncharacterized protein LOC1034857401.6e-2350Show/hide
Query:  NRDILVVQCVVEDCEWFLR-ACQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLRIVLSEKISIAVSELPTPKDIISFIQSEYGLHISYQKVWR
        N++++++QC +E+C+W LR +C    D  L WV+ RFDS+HTCSIDV LTDH       ++ ++  KIS+  SEL TPKDI+ FI++E+ L ISYQK WR
Subjt:  NRDILVVQCVVEDCEWFLR-ACQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLRIVLSEKISIAVSELPTPKDIISFIQSEYGLHISYQKVWR

Query:  AREATLNE
        ARE  L++
Subjt:  AREATLNE
A0A1S3BT85 uncharacterized protein LOC1034932672.3e-2542.28Show/hide
Query:  MSSNFEIWVDDMFSSKIVLQSAIRSYC----HQRQLSIQNRDILVVQCVVEDCEWFLRA-CQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLR
        + SNF + V DMFS+K + +  ++        Q      N +++++QCV+E+C+W L A C   GD S+ WV+ RFDS+ TCS+D  LTDH +     ++
Subjt:  MSSNFEIWVDDMFSSKIVLQSAIRSYC----HQRQLSIQNRDILVVQCVVEDCEWFLRA-CQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLR

Query:  IVLSEKISIAVSELPTPKDIISFIQSEYGLHISYQKVWRAREATLNEFR
         ++  KI +A S+L TPKDI+ FI  E+GL I YQK WRAR A L++ R
Subjt:  IVLSEKISIAVSELPTPKDIISFIQSEYGLHISYQKVWRAREATLNEFR
A0A1S3CIV7 uncharacterized protein LOC1035013365.9e-2643.62Show/hide
Query:  MSSNFEIWVDDMFSSKIVLQSAIRSYC----HQRQLSIQNRDILVVQCVVEDCEWFLRA-CQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLR
        + SNF + V DMFSSK + +  I++       Q  +   N++++++QC +E+C+W LRA C   GD SL WV+ RFD +HT S+DV LTDH +     ++
Subjt:  MSSNFEIWVDDMFSSKIVLQSAIRSYC----HQRQLSIQNRDILVVQCVVEDCEWFLRA-CQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLR

Query:  IVLSEKISIAVSELPTPKDIISFIQSEYGLHISYQKVWRAREATLNEFR
         ++  KIS+A S+L TPK+I+ FI  E+GL ISYQK WRA +  L++ R
Subjt:  IVLSEKISIAVSELPTPKDIISFIQSEYGLHISYQKVWRAREATLNEFR
A0A5A7TCZ3 Protein FAR-RED ELONGATED HYPOCOTYL 3-like5.9e-2643.62Show/hide
Query:  MSSNFEIWVDDMFSSKIVLQSAIRSYC----HQRQLSIQNRDILVVQCVVEDCEWFLRA-CQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLR
        + SNF + V DMFSSK + +  I++       Q  +   N++++++QC +E+C+W LRA C   GD SL WV+ RFD +HT S+DV LTDH +     ++
Subjt:  MSSNFEIWVDDMFSSKIVLQSAIRSYC----HQRQLSIQNRDILVVQCVVEDCEWFLRA-CQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLR

Query:  IVLSEKISIAVSELPTPKDIISFIQSEYGLHISYQKVWRAREATLNEFR
         ++  KIS+A S+L TPK+I+ FI  E+GL ISYQK WRA +  L++ R
Subjt:  IVLSEKISIAVSELPTPKDIISFIQSEYGLHISYQKVWRAREATLNEFR
A0A5A7V2Y2 Protein FAR-RED ELONGATED HYPOCOTYL 3-like7.8e-2642.28Show/hide
Query:  MSSNFEIWVDDMFSSKIVLQSAIRSYC----HQRQLSIQNRDILVVQCVVEDCEWFLRA-CQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLR
        + SNF + V DMFS+K + +  +++       Q  +   N++++++QC +E+C+W LRA C   GD SL WV+ RFDS+HTC +DV L+D+ +      +
Subjt:  MSSNFEIWVDDMFSSKIVLQSAIRSYC----HQRQLSIQNRDILVVQCVVEDCEWFLRA-CQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLR

Query:  IVLSEKISIAVSELPTPKDIISFIQSEYGLHISYQKVWRAREATLNEFR
         ++  KIS+A  EL T KDI+ FI++E+GL ISYQK WRA E  L++ R
Subjt:  IVLSEKISIAVSELPTPKDIISFIQSEYGLHISYQKVWRAREATLNEFR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCAATTTTGAGATTTGGGTGGATGACATGTTCTCTTCCAAGATTGTGTTACAGAGTGCGATTCGATCTTATTGCCATCAGAGACAACTTTCAATTCAAAATCG
GGATATTTTGGTTGTGCAATGTGTTGTTGAGGATTGTGAGTGGTTCCTTAGAGCATGTCAGTTCGGAGGTGATGGTAGTCTCACTTGGGTTGTCAAGAGATTTGATAGTG
ATCATACATGTTCAATTGATGTTGTATTGACTGATCACAACAAGCGACATTTACCTTCATTAAGGATTGTATTAAGCGAAAAGATTAGCATTGCAGTGAGTGAATTACCG
ACTCCTAAAGACATTATATCATTCATTCAATCAGAATATGGCTTGCATATTAGCTATCAGAAAGTTTGGCGTGCTCGTGAAGCTACATTAAATGAATTTAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCAATTTTGAGATTTGGGTGGATGACATGTTCTCTTCCAAGATTGTGTTACAGAGTGCGATTCGATCTTATTGCCATCAGAGACAACTTTCAATTCAAAATCG
GGATATTTTGGTTGTGCAATGTGTTGTTGAGGATTGTGAGTGGTTCCTTAGAGCATGTCAGTTCGGAGGTGATGGTAGTCTCACTTGGGTTGTCAAGAGATTTGATAGTG
ATCATACATGTTCAATTGATGTTGTATTGACTGATCACAACAAGCGACATTTACCTTCATTAAGGATTGTATTAAGCGAAAAGATTAGCATTGCAGTGAGTGAATTACCG
ACTCCTAAAGACATTATATCATTCATTCAATCAGAATATGGCTTGCATATTAGCTATCAGAAAGTTTGGCGTGCTCGTGAAGCTACATTAAATGAATTTAGATGA
Protein sequenceShow/hide protein sequence
MSSNFEIWVDDMFSSKIVLQSAIRSYCHQRQLSIQNRDILVVQCVVEDCEWFLRACQFGGDGSLTWVVKRFDSDHTCSIDVVLTDHNKRHLPSLRIVLSEKISIAVSELP
TPKDIISFIQSEYGLHISYQKVWRAREATLNEFR