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Lag0041458 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041458
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr13:18255878..18256411
RNA-Seq ExpressionLag0041458
SyntenyLag0041458
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2663507.1 hypothetical protein I3760_16G033000 [Carya illinoinensis]3.9e-1339.22Show/hide
Query:  HERKKNSHRGGPWHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKPLRRGT
        H  K     G PW FD  L     F G+   S ++F +ASFW+ F NLP + + ++    LG+ +G+ E++++DE D   GRS+RVK+ +D+ KPL RG 
Subjt:  HERKKNSHRGGPWHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKPLRRGT

Query:  VI
         I
Subjt:  VI

TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]5.9e-1443.75Show/hide
Query:  KKNSHRGGPWHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKPLRRG
        +K    GGPW FD+ LL  +E  G+E+ ++L+FRY  FWI   NLP  CL R+    LG  VG+ +++D  E  +  G+ IR++V IDV  PL+RG
Subjt:  KKNSHRGGPWHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKPLRRG

XP_042952130.1 uncharacterized protein At4g02000-like [Carya illinoinensis]2.9e-1339.78Show/hide
Query:  GGPWHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKPLRRGTVI
        G PW FD  LL  KE+ G+     ++F   SFW+ F N+P  C+T K  E +G++VGK EK+D+ E   G G  +RV++ +D+ +P+ RG  +
Subjt:  GGPWHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKPLRRGTVI

XP_042979872.1 uncharacterized protein LOC122310049 [Carya illinoinensis]2.9e-1339.22Show/hide
Query:  HERKKNSHRGGPWHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKPLRRGT
        H  K+    G PW FD  L     F G+   S ++F +ASFW+ F NLP + + ++    LG+ +G+ E++++DE D   GRS+RVK+ +D+ KPL RG 
Subjt:  HERKKNSHRGGPWHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKPLRRGT

Query:  VI
         I
Subjt:  VI

XP_042983219.1 uncharacterized protein LOC122312628 [Carya illinoinensis]1.3e-1337.61Show/hide
Query:  MQIQLHERKKNSHRGGPWHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKP
        ++ QL   KK    G PW FDR L+  KEF+ +   S +EF+   FW+   NLP   + R+  E +G A+GK   +++D+   G G  +R+KV++DV KP
Subjt:  MQIQLHERKKNSHRGGPWHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKP

Query:  LRRGTVIKI
        L RG ++ +
Subjt:  LRRGTVIKI

TrEMBL top hitse value%identityAlignment
A0A2N9F2M3 Uncharacterized protein8.4e-1439.13Show/hide
Query:  PWHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKPLRRGTVIK
        PW FD+ L+    F G+++ + ++F Y +FWI   NLP   ++R+   D+G  +G   ++D+ E+  G GR +R++VEID+ KPLRRG++I+
Subjt:  PWHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKPLRRGTVIK

A0A2N9FMB2 CCHC-type domain-containing protein4.9e-1441.94Show/hide
Query:  PWHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKPLRRGTVIKI
        PW FD+ L+    FK + + + ++F +++FWI   NLP   +TR+ AED+GN VG+F + D+ E+  G GR +RV+VE+D+ +PL RG +++I
Subjt:  PWHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKPLRRGTVIKI

A0A2N9H410 CCHC-type domain-containing protein4.9e-1441.94Show/hide
Query:  PWHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKPLRRGTVIKI
        PW FD+ L+    FK + + + ++F +++FWI   NLP   +TR+ AED+GN VG+F + D+ E+  G GR +RV+VE+D+ +PL RG +++I
Subjt:  PWHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKPLRRGTVIKI

A0A2N9IZB6 Reverse transcriptase domain-containing protein2.9e-1446.74Show/hide
Query:  WHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKPLRRGTVIKI
        W FD+ L+    FK + + + ++F  ++FWI  INLP  C+ R+ AED+GNAVG F + DL E   G GR +RV+VEIDV +PL RG +++I
Subjt:  WHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKPLRRGTVIKI

A0A5C7H9Y2 CCHC-type domain-containing protein2.9e-1443.75Show/hide
Query:  KKNSHRGGPWHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKPLRRG
        +K    GGPW FD+ LL  +E  G+E+ ++L+FRY  FWI   NLP  CL R+    LG  VG+ +++D  E  +  G+ IR++V IDV  PL+RG
Subjt:  KKNSHRGGPWHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKPLRRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATTCAGCTCCATGAAAGGAAAAAGAACAGTCATCGAGGGGGCCCGTGGCATTTTGACAGAGCTCTGCTTCCATTTAAAGAGTTCAAAGGGAATGAAAGATACTC
TAACCTGGAATTCAGGTACGCCTCTTTCTGGATTCATTTTATTAACTTGCCAAGAGTTTGCTTGACTAGGAAATGGGCAGAAGACCTTGGCAACGCTGTTGGGAAGTTTG
AGAAAATGGACTTAGATGAGCATGATCAGGGTGAAGGAAGATCTATACGGGTTAAAGTTGAGATAGATGTGGAAAAACCTCTTCGCAGAGGCACTGTGATCAAAATCGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGCAACGTCA
TCGCGACGCGGAGCGGCCGACATCCTTTCTTGGGTTTTTTAGAAGAAAATTGGAGTCGCCACCAATCATTGAGGGTGTGATTGGTCACCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATTCAGCTCCATGAAAGGAAAAAGAACAGTCATCGAGGGGGCCCGTGGCATTTTGACAGAGCTCTGCTTCCATTTAAAGAGTTCAAAGGGAATGAAAGATACTC
TAACCTGGAATTCAGGTACGCCTCTTTCTGGATTCATTTTATTAACTTGCCAAGAGTTTGCTTGACTAGGAAATGGGCAGAAGACCTTGGCAACGCTGTTGGGAAGTTTG
AGAAAATGGACTTAGATGAGCATGATCAGGGTGAAGGAAGATCTATACGGGTTAAAGTTGAGATAGATGTGGAAAAACCTCTTCGCAGAGGCACTGTGATCAAAATCGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGCAACGTCA
TCGCGACGCGGAGCGGCCGACATCCTTTCTTGGGTTTTTTAGAAGAAAATTGGAGTCGCCACCAATCATTGAGGGTGTGATTGGTCACCTTTAA
Protein sequenceShow/hide protein sequence
MQIQLHERKKNSHRGGPWHFDRALLPFKEFKGNERYSNLEFRYASFWIHFINLPRVCLTRKWAEDLGNAVGKFEKMDLDEHDQGEGRSIRVKVEIDVEKPLRRGTVIKIX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQRHRDAERPTSFLGFFRRKLESPPIIEGVIGHL