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Lag0041460 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041460
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon, En/Spm-like protein
Genome locationchr13:18278909..18283211
RNA-Seq ExpressionLag0041460
SyntenyLag0041460
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsIPR025312 - Domain of unknown function DUF4216


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8482904.1 hypothetical protein CXB51_024458 [Gossypium anomalum]5.1e-2435.21Show/hide
Query:  KSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAKM
        ++QN GV V + +TSYAS+RD NPV G V YYG+L DIIEL+Y  R+KV+LF+CDW D       K D + FT+VNFSRL+HT + L  EP++ +SQ K 
Subjt:  KSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAKM

Query:  EKNFFKWTSSSCVVTESSPLEENYD--NFGETNDVDTEVDLTANGDVDVE-------------------------GTAGRACNLCPLNYNDWRKVPKVYK
               T     V   +   + +D    G T  V     L+   D+D                           G   R  N+ P+NY  W  +P   K
Subjt:  EKNFFKWTSSSCVVTESSPLEENYD--NFGETNDVDTEVDLTANGDVDVE-------------------------GTAGRACNLCPLNYNDWRKVPKVYK

Query:  DEVCEILKTKFTL
        ++    +K +F L
Subjt:  DEVCEILKTKFTL

XP_020111541.1 uncharacterized protein LOC109726394 isoform X1 [Ananas comosus]1.7e-2456.57Show/hide
Query:  KSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAK
        ++QNSG+ VT+ + SYAS+RD NP  G V YYGIL DI+EL+Y  +F+VVLF+CDW D T+    + D + FT+VNFSRL+HT E L HEPF+ +SQ K
Subjt:  KSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAK

XP_020111544.1 uncharacterized protein LOC109726394 isoform X3 [Ananas comosus]1.7e-2456.57Show/hide
Query:  KSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAK
        ++QNSG+ VT+ + SYAS+RD NP  G V YYGIL DI+EL+Y  +F+VVLF+CDW D T+    + D + FT+VNFSRL+HT E L HEPF+ +SQ K
Subjt:  KSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAK

XP_038702466.1 uncharacterized protein LOC119999044 [Tripterygium wilfordii]4.9e-2764.36Show/hide
Query:  MKSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAK
        +KSQNSGV VT + TSYAS RD+NPV G+VTYYG  ++I+EL+Y   FKV+LFKCDWVD T G   K D + FTLVNF  LVHT E + HEPFI ASQAK
Subjt:  MKSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAK

Query:  M
        +
Subjt:  M

XP_039140514.1 uncharacterized protein LOC120277730 [Dioscorea cayenensis subsp. rotundata]1.2e-2550Show/hide
Query:  MKSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAK
        +K+QNSGV VT+++ SYASSRD  P+ GE+ YYG+L DII+LNY  RFKVVLFKCDW+DP  G++K  D + FT+VNFS L H+   L  +PF+ ASQAK
Subjt:  MKSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAK

Query:  MEKNFFKWTSSSCVVTESSPLEENYD
                 +   ++ + + L + YD
Subjt:  MEKNFFKWTSSSCVVTESSPLEENYD

TrEMBL top hitse value%identityAlignment
A0A1R3G254 Zinc finger, CCHC-type3.2e-2457.58Show/hide
Query:  KSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAK
        ++QNSGV  T+   SYAS+RDRNP+ G+V YYGIL DIIEL+Y D+FKVVLF+CDW D       K D + FTLVNFS L+HT + L  EP++ +SQ K
Subjt:  KSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAK

A0A1R3HEL3 Transposon, En/Spm-like protein4.2e-2457.58Show/hide
Query:  KSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAK
        ++QNSGV VT+   SYAS+RDRNP+ G+V YYGIL +IIELNY ++FKVVLF+CDW D T     K D + FTLVNFS L+HT + L  EP++ +SQ +
Subjt:  KSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAK

A0A1R3JNC1 Transposon, En/Spm-like protein4.2e-2457.58Show/hide
Query:  KSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAK
        ++QNSGV VT+   SYAS+RDRNP+ G+V YYGIL +IIELNY ++FKVVLF+CDW D T     K D + FTLVNFS L+HT + L  EP++ +SQ +
Subjt:  KSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAK

A0A6P5GSB3 uncharacterized protein LOC109726394 isoform X18.4e-2556.57Show/hide
Query:  KSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAK
        ++QNSG+ VT+ + SYAS+RD NP  G V YYGIL DI+EL+Y  +F+VVLF+CDW D T+    + D + FT+VNFSRL+HT E L HEPF+ +SQ K
Subjt:  KSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAK

A0A6P5GUL1 uncharacterized protein LOC109726394 isoform X38.4e-2556.57Show/hide
Query:  KSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAK
        ++QNSG+ VT+ + SYAS+RD NP  G V YYGIL DI+EL+Y  +F+VVLF+CDW D T+    + D + FT+VNFSRL+HT E L HEPF+ +SQ K
Subjt:  KSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCACAAAATAGTGGAGTTTCAGTGACAACCCAAGTTACTAGCTATGCTAGCTCTCGAGATAGGAATCCAGTAGTGGGGGAGGTTACATATTATGGGATTTTAAG
AGATATTATTGAATTAAATTATTGTGATCGATTCAAAGTTGTATTGTTTAAATGCGATTGGGTAGATCCAACTGCAGGCATTGAGAAAAAAGTCGACATGTATAATTTTA
CTTTGGTGAATTTTTCTCGTTTAGTTCATACAAGAGAACTATTGGGACATGAGCCTTTTATCTGTGCATCTCAAGCAAAAATGGAAAAAAATTTCTTCAAATGGACGTCG
TCGTCTTGTGTGGTTACAGAGTCTAGTCCTTTAGAAGAAAATTATGATAATTTTGGTGAAACAAATGATGTTGATACTGAAGTTGACTTAACAGCCAATGGTGATGTTGA
TGTAGAAGGAACTGCGGGGAGAGCTTGCAACCTTTGCCCTCTAAATTATAATGATTGGAGAAAGGTGCCCAAGGTATACAAGGATGAAGTATGTGAGATCTTAAAGACGA
AGTTCACACTTCATGGAAGAAAAATAGAAAGTGGTGTCTATCTTCATTGTCTAGGAAGTGGGGCGGTTATAAGTGTCATTTACGAGGACACTATGTTCCAAAATATGAAA
CTGAAAATGAATGCTTACAACATAAACCAGACAATATACCAAGAGAGATCAATGGACTGGCTTGGTCTCTTTTTGAGTGTTGGTTCCCACAAGTCACTCAACGACATCCC
TAGGAGAGTACTGGTGAAATTCTTGTGGTGGTGTTACGTGGAGATCTGTCTAGCGAAGAACTACGAAGGGGTTGCTGGAATTTTGTGCAAGATCACAAGAAAAAGTGTTT
TTTCGGTCAAGGCTTCATACGGGAAAGTCTTTGCGAGGAGGATGCGCCCGCAAGAAGAGATAAAAGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTCACAAAATAGTGGAGTTTCAGTGACAACCCAAGTTACTAGCTATGCTAGCTCTCGAGATAGGAATCCAGTAGTGGGGGAGGTTACATATTATGGGATTTTAAG
AGATATTATTGAATTAAATTATTGTGATCGATTCAAAGTTGTATTGTTTAAATGCGATTGGGTAGATCCAACTGCAGGCATTGAGAAAAAAGTCGACATGTATAATTTTA
CTTTGGTGAATTTTTCTCGTTTAGTTCATACAAGAGAACTATTGGGACATGAGCCTTTTATCTGTGCATCTCAAGCAAAAATGGAAAAAAATTTCTTCAAATGGACGTCG
TCGTCTTGTGTGGTTACAGAGTCTAGTCCTTTAGAAGAAAATTATGATAATTTTGGTGAAACAAATGATGTTGATACTGAAGTTGACTTAACAGCCAATGGTGATGTTGA
TGTAGAAGGAACTGCGGGGAGAGCTTGCAACCTTTGCCCTCTAAATTATAATGATTGGAGAAAGGTGCCCAAGGTATACAAGGATGAAGTATGTGAGATCTTAAAGACGA
AGTTCACACTTCATGGAAGAAAAATAGAAAGTGGTGTCTATCTTCATTGTCTAGGAAGTGGGGCGGTTATAAGTGTCATTTACGAGGACACTATGTTCCAAAATATGAAA
CTGAAAATGAATGCTTACAACATAAACCAGACAATATACCAAGAGAGATCAATGGACTGGCTTGGTCTCTTTTTGAGTGTTGGTTCCCACAAGTCACTCAACGACATCCC
TAGGAGAGTACTGGTGAAATTCTTGTGGTGGTGTTACGTGGAGATCTGTCTAGCGAAGAACTACGAAGGGGTTGCTGGAATTTTGTGCAAGATCACAAGAAAAAGTGTTT
TTTCGGTCAAGGCTTCATACGGGAAAGTCTTTGCGAGGAGGATGCGCCCGCAAGAAGAGATAAAAGGTTAG
Protein sequenceShow/hide protein sequence
MKSQNSGVSVTTQVTSYASSRDRNPVVGEVTYYGILRDIIELNYCDRFKVVLFKCDWVDPTAGIEKKVDMYNFTLVNFSRLVHTRELLGHEPFICASQAKMEKNFFKWTS
SSCVVTESSPLEENYDNFGETNDVDTEVDLTANGDVDVEGTAGRACNLCPLNYNDWRKVPKVYKDEVCEILKTKFTLHGRKIESGVYLHCLGSGAVISVIYEDTMFQNMK
LKMNAYNINQTIYQERSMDWLGLFLSVGSHKSLNDIPRRVLVKFLWWCYVEICLAKNYEGVAGILCKITRKSVFSVKASYGKVFARRMRPQEEIKG