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Lag0041461 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041461
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase core domain containing protein
Genome locationchr13:18292591..18293004
RNA-Seq ExpressionLag0041461
SyntenyLag0041461
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148963.1 uncharacterized protein LOC111017501 [Momordica charantia]1.0e-2955.08Show/hide
Query:  NPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNLQISGYPMDMRSFIS
        NP Y  W+  +QLL+GWL+NSMTPEVA QVMG++ A  LW ++QE +GVQS+++EDY R + QQTRKG++KM ++L +MK H DNL  +G P+  RS IS
Subjt:  NPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNLQISGYPMDMRSFIS

Query:  HVTAGLDEDYTPIVCVIR
         V  GLDE+Y P+V  I+
Subjt:  HVTAGLDEDYTPIVCVIR

XP_038887140.1 uncharacterized protein LOC120077331 [Benincasa hispida]4.7e-2753.39Show/hide
Query:  NPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNLQISGYPMDMRSFIS
        NP+Y  WM  +QLL+GWL+NSMTPEV  QVMG   AK LW S+Q+ + +QS+ +EDY R + Q+TRKGN+KM +YL  MK + DNL+ +G PM  R+ +S
Subjt:  NPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNLQISGYPMDMRSFIS

Query:  HVTAGLDEDYTPIVCVIR
         V  GLDE+Y  IV  I+
Subjt:  HVTAGLDEDYTPIVCVIR

XP_038904321.1 uncharacterized protein LOC120090675 [Benincasa hispida]6.2e-2750Show/hide
Query:  NPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNLQISGYPMDMRSFIS
        NP+Y  WM  +QLL+GWL+NSMTP++A QVMG + A+ LW ++Q+ +G+QS+++EDY R + Q TRKGN+KM +YL  MK + DNL+ +G P+  R+ + 
Subjt:  NPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNLQISGYPMDMRSFIS

Query:  HVTAGLDEDYTPIVCVIR
         V  GLDE+Y  IV  I+
Subjt:  HVTAGLDEDYTPIVCVIR

XP_038905161.1 uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida]6.6e-2955.93Show/hide
Query:  NPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNLQISGYPMDMRSFIS
        NP+Y  WM  +QLL+GWL+NSMTPEVA QVMG + AK LW S+ + +GVQS+ +EDY R + Q TRKGN+KM EYL  MK + DNL+ +G PM  R+ +S
Subjt:  NPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNLQISGYPMDMRSFIS

Query:  HVTAGLDEDYTPIVCVIR
         V  GLDE+Y  IV +I+
Subjt:  HVTAGLDEDYTPIVCVIR

XP_038905164.1 uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida]6.6e-2955.93Show/hide
Query:  NPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNLQISGYPMDMRSFIS
        NP+Y  WM  +QLL+GWL+NSMTPEVA QVMG + AK LW S+ + +GVQS+ +EDY R + Q TRKGN+KM EYL  MK + DNL+ +G PM  R+ +S
Subjt:  NPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNLQISGYPMDMRSFIS

Query:  HVTAGLDEDYTPIVCVIR
         V  GLDE+Y  IV +I+
Subjt:  HVTAGLDEDYTPIVCVIR

TrEMBL top hitse value%identityAlignment
A0A2Z7BJW9 Uncharacterized protein (Fragment)1.3e-2241.98Show/hide
Query:  FPPSEDDSDGLLIPNPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNL
        F P       + IPNPEY  W+  +QLL+GWL+++M+ ++A+Q+M    +K+LWD  +E  G Q++S+  Y +  LQ+T+KG MKM EYL  MK   DNL
Subjt:  FPPSEDDSDGLLIPNPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNL

Query:  QISGYPMDMRSFISHVTAGLDEDYTPIVCVI
         ++G P+ +   I  + +GLD +YTPIV ++
Subjt:  QISGYPMDMRSFISHVTAGLDEDYTPIVCVI

A0A5A7SIT7 Uncharacterized protein4.8e-2550Show/hide
Query:  IPNPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNLQISGYPMDMRSF
        I N  +  W+  + LL+GWL+NSMTP+VA Q+MG    + LWD+ Q+++GVQS+++ED+ R MLQ TRKGN KM EYL +MK + DNL   G P+  R+ 
Subjt:  IPNPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNLQISGYPMDMRSF

Query:  ISHVTAGLDEDYTPIVCVIR
        IS V  GLDE Y  ++ VI+
Subjt:  ISHVTAGLDEDYTPIVCVIR

A0A5A7UY76 Integrase, catalytic core4.5e-2350Show/hide
Query:  NPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNLQISGYPMDMRSFIS
        NP+++ W+ ++ LL+GW++NSMT EVA Q+MG + AK L +++Q+ +GVQS+ +ED+ R   Q TRKGN KM +YL IMK + +NL  +G P+ +RS IS
Subjt:  NPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNLQISGYPMDMRSFIS

Query:  HVTAGLDEDYTP
         V  GLDE Y P
Subjt:  HVTAGLDEDYTP

A0A6J1D5J0 uncharacterized protein LOC1110175014.9e-3055.08Show/hide
Query:  NPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNLQISGYPMDMRSFIS
        NP Y  W+  +QLL+GWL+NSMTPEVA QVMG++ A  LW ++QE +GVQS+++EDY R + QQTRKG++KM ++L +MK H DNL  +G P+  RS IS
Subjt:  NPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNLQISGYPMDMRSFIS

Query:  HVTAGLDEDYTPIVCVIR
         V  GLDE+Y P+V  I+
Subjt:  HVTAGLDEDYTPIVCVIR

A0A6J1DCW4 uncharacterized protein LOC1110195987.4e-2647.46Show/hide
Query:  NPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNLQISGYPMDMRSFIS
        NP Y  W+  ++LL+GWL+NSM  +VA QVMG   +++LW +VQE +GVQS+++ DY + + QQT KG+++M EYL +MK H DNL ++G  + +R  +S
Subjt:  NPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNLQISGYPMDMRSFIS

Query:  HVTAGLDEDYTPIVCVIR
         V  GLDE+Y PIV  ++
Subjt:  HVTAGLDEDYTPIVCVIR

SwissProt top hitse value%identityAlignment
Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.8e-0825.19Show/hide
Query:  SIIFPPSEDDSDGLLIPNPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHF
        S   PP+   +D     NP+Y  W   ++L+   +  +++  V   V     A ++W+++++ Y   S       R  L+Q  KG   + +Y+  +   F
Subjt:  SIIFPPSEDDSDGLLIPNPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHF

Query:  DNLQISGYPMDMRSFISHVTAGLDEDYTPIV
        D L + G PMD    +  V   L E+Y P++
Subjt:  DNLQISGYPMDMRSFISHVTAGLDEDYTPIV

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATCATCTTTCCTCCATCTGAAGATGATTCGGATGGTCTTCTTATTCCTAACCCCGAGTACAATTTATGGATGGAAGCGAACCAACTATTGGTAGGATGGTTACA
TAACTCCATGACTCCGGAAGTAGCTGCTCAAGTGATGGGTCATGACGAAGCCAAGAAGCTGTGGGACTCGGTTCAAGAATACTATGGGGTGCAGTCAAAATCCCAAGAAG
ATTATAATCGATTGATGCTACAACAAACAAGGAAAGGTAACATGAAAATGTATGAATATCTTGATATTATGAAAAGGCACTTTGATAATTTGCAAATCTCTGGATACCCA
ATGGATATGAGGAGTTTTATCTCCCATGTTACTGCTGGACTTGATGAAGATTATACTCCTATAGTCTGTGTCATTAGGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATCATCTTTCCTCCATCTGAAGATGATTCGGATGGTCTTCTTATTCCTAACCCCGAGTACAATTTATGGATGGAAGCGAACCAACTATTGGTAGGATGGTTACA
TAACTCCATGACTCCGGAAGTAGCTGCTCAAGTGATGGGTCATGACGAAGCCAAGAAGCTGTGGGACTCGGTTCAAGAATACTATGGGGTGCAGTCAAAATCCCAAGAAG
ATTATAATCGATTGATGCTACAACAAACAAGGAAAGGTAACATGAAAATGTATGAATATCTTGATATTATGAAAAGGCACTTTGATAATTTGCAAATCTCTGGATACCCA
ATGGATATGAGGAGTTTTATCTCCCATGTTACTGCTGGACTTGATGAAGATTATACTCCTATAGTCTGTGTCATTAGGAGTTAA
Protein sequenceShow/hide protein sequence
MSIIFPPSEDDSDGLLIPNPEYNLWMEANQLLVGWLHNSMTPEVAAQVMGHDEAKKLWDSVQEYYGVQSKSQEDYNRLMLQQTRKGNMKMYEYLDIMKRHFDNLQISGYP
MDMRSFISHVTAGLDEDYTPIVCVIRS