; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041470 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041470
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr13:18516102..18516544
RNA-Seq ExpressionLag0041470
SyntenyLag0041470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]3.4e-1555.88Show/hide
Query:  ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDK
        I K + ES K  + +K+NPL+      S +     +PDVMSVMMADV  +  MAEMERK+NLLMK VDERD EIA LK Q+QT E AESSQTP    +DK
Subjt:  ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDK

Query:  GR
        G+
Subjt:  GR
XP_031737053.1 uncharacterized protein LOC116402138 [Cucumis sativus]3.4e-1555.88Show/hide
Query:  ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDK
        I K + ES K  + +K+NPL+      S +     +PDVMSVMMADV  +  MAEMERK+NLLMK VDERD EIA LK Q+QT E AESSQTP    +DK
Subjt:  ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDK

Query:  GR
        G+
Subjt:  GR
XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]3.4e-1555.88Show/hide
Query:  ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDK
        I K + ES K  + +K+NPL+      S +     +PDVMSVMMADV  +  MAEMERK+NLLMK VDERD EIA LK Q+QT E AESSQTP    +DK
Subjt:  ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDK

Query:  GR
        G+
Subjt:  GR
XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]3.4e-1555.88Show/hide
Query:  ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDK
        I K + ES K  + +K+NPL+      S +     +PDVMSVMMADV  +  MAEMERK+NLLMK VDERD EIA LK Q+QT E AESSQTP    +DK
Subjt:  ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDK

Query:  GR
        G+
Subjt:  GR
XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]3.4e-1555.88Show/hide
Query:  ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDK
        I K + ES K  + +K+NPL+      S +     +PDVMSVMMADV  +  MAEMERK+NLLMK VDERD EIA LK Q+QT E AESSQTP    +DK
Subjt:  ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDK

Query:  GR
        G+
Subjt:  GR
TrEMBL top hitse value%identityAlignment
A0A5A7T9K9 Ty3-gypsy retrotransposon protein3.1e-1452.08Show/hide
Query:  ESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDKGR
        ES K  + +K+NPL+++    S + K   NPDVMSVMMAD+  +  MAEMERK+N LMKA +ERD EI  L+ Q++T E  ESSQTP     DKG+
Subjt:  ESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDKGR
A0A5A7UF60 Ty3-gypsy retrotransposon protein9.1e-1450.98Show/hide
Query:  ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDK
        I K + ES K  + +K NPL+++    S   K   +PDVMSVMMAD+  +  MAEME+K+N LMKAV+ERD EI  L+ Q++T E AESSQTP     DK
Subjt:  ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDK

Query:  GR
        G+
Subjt:  GR
A0A5A7UG56 Ty3-gypsy retrotransposon protein2.7e-1349.02Show/hide
Query:  ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDK
        I K + ES K  + +K+NPL+++    S + K   +PDVMSV+MAD+  +  M EMERK+N LMKAV+ERD EI  L+ Q++T E  ESSQTP     DK
Subjt:  ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDK

Query:  GR
        G+
Subjt:  GR
A0A5A7VDN4 Ty3-gypsy retrotransposon protein1.2e-1352.08Show/hide
Query:  ESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDKGR
        ES K  + +++NPL+++   TS + K   + DVMSVMMAD+  +  MAEMERK+N LMKAV+ERD EI  L+ Q++T E AESSQTP     DKG+
Subjt:  ESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDKGR
A0A5D3BY54 Ty3-gypsy retrotransposon protein1.1e-1451.96Show/hide
Query:  ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDK
        I K + ES K  + +K+NPL+++   +S + K   +PDVMSVMMAD+  +  MAEMERK+N LMKAV+ERD EI  L+ Q++T E AESSQTP     DK
Subjt:  ISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQT-EKAESSQTPAAGKNDK

Query:  GR
        G+
Subjt:  GR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCAAAGAAAGCTCCCGCGAAGATCTCAAAGTTGATTGAAGAATCCTCTAAGGATAAGGTTGCAGTCAAAGACAACCCACTGTTCGAATCTGTCGTTCCAACATC
TAAGCAGCCAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGCTGATGTAGACCAGGATGAAAGAATGGCAGAGATGGAAAGGAAACTCAATCTCTTAATGA
AGGCAGTTGATGAGAGAGATCTTGAGATTGCCTATTTGAAGAACCAGCTGCAAACCGAGAAGGCTGAGTCTAGCCAGACCCCTGCTGCAGGAAAGAATGATAAGGGAAGG
CTGTCATCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACCAAAGAAAGCTCCCGCGAAGATCTCAAAGTTGATTGAAGAATCCTCTAAGGATAAGGTTGCAGTCAAAGACAACCCACTGTTCGAATCTGTCGTTCCAACATC
TAAGCAGCCAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGCTGATGTAGACCAGGATGAAAGAATGGCAGAGATGGAAAGGAAACTCAATCTCTTAATGA
AGGCAGTTGATGAGAGAGATCTTGAGATTGCCTATTTGAAGAACCAGCTGCAAACCGAGAAGGCTGAGTCTAGCCAGACCCCTGCTGCAGGAAAGAATGATAAGGGAAGG
CTGTCATCGTGA
Protein sequenceShow/hide protein sequence
MAPKKAPAKISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQTEKAESSQTPAAGKNDKGR
LSS