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Lag0041476 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041476
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPentatricopeptide repeat
Genome locationchr13:18633541..18636387
RNA-Seq ExpressionLag0041476
SyntenyLag0041476
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8526756.1 hypothetical protein F0562_009015 [Nyssa sinensis]2.3e-1285.71Show/hide
Query:  NRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFGESIRG
        +RMVRFMEKDDPNLRHPYDWY Y EF PYSWRGVV GE IRG
Subjt:  NRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFGESIRG
RVW42981.1 hypothetical protein CK203_076353 [Vitis vinifera]5.1e-1240.95Show/hide
Query:  KSLNNPSSPFLQLPHTILQSSSLNPNPKIPSNPQTTLHQFRSPITSARMNYNRPASDTI---LNRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFG
        KS   PS   ++    + + +  N   K+    ++  ++ ++P  +   N++      I    +RMVRFMEKDDPNLRHPYDWY Y EF PYSWRG+V G
Subjt:  KSLNNPSSPFLQLPHTILQSSSLNPNPKIPSNPQTTLHQFRSPITSARMNYNRPASDTI---LNRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFG

Query:  ESIRG
        + IRG
Subjt:  ESIRG
TKY56781.1 hypothetical protein E2542_SST21227 [Spatholobus suberectus]3.9e-1279.07Show/hide
Query:  NRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFGESIRGG
        +RMVRFMEKDDPNLRHPYDWY Y ++ PYSWRGVV GE +RGG
Subjt:  NRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFGESIRGG
XP_004146025.1 uncharacterized protein LOC101207599 [Cucumis sativus]3.0e-1285.71Show/hide
Query:  NRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFGESIRG
        +RMVRFMEKDDPNLRHPYDWY Y EF PYSWRGVV GE IRG
Subjt:  NRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFGESIRG
XP_038898752.1 uncharacterized protein LOC120086270 [Benincasa hispida]3.0e-1285.71Show/hide
Query:  NRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFGESIRG
        +RMVRFMEKDDPNLRHPYDWY Y EF PYSWRGVV GE IRG
Subjt:  NRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFGESIRG
TrEMBL top hitse value%identityAlignment
A0A0A0L3A4 Uncharacterized protein1.4e-1285.71Show/hide
Query:  NRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFGESIRG
        +RMVRFMEKDDPNLRHPYDWY Y EF PYSWRGVV GE IRG
Subjt:  NRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFGESIRG
A0A438E5F4 Uncharacterized protein2.5e-1240.95Show/hide
Query:  KSLNNPSSPFLQLPHTILQSSSLNPNPKIPSNPQTTLHQFRSPITSARMNYNRPASDTI---LNRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFG
        KS   PS   ++    + + +  N   K+    ++  ++ ++P  +   N++      I    +RMVRFMEKDDPNLRHPYDWY Y EF PYSWRG+V G
Subjt:  KSLNNPSSPFLQLPHTILQSSSLNPNPKIPSNPQTTLHQFRSPITSARMNYNRPASDTI---LNRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFG

Query:  ESIRG
        + IRG
Subjt:  ESIRG
A0A5B7B9Y6 Uncharacterized protein (Fragment)1.1e-1285.71Show/hide
Query:  NRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFGESIRG
        +RMVRFMEKDDPNLRHPYDWY Y EF PYSWRGVV GE IRG
Subjt:  NRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFGESIRG
A0A5J5AAB5 Uncharacterized protein1.1e-1285.71Show/hide
Query:  NRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFGESIRG
        +RMVRFMEKDDPNLRHPYDWY Y EF PYSWRGVV GE IRG
Subjt:  NRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFGESIRG
F6H2N0 Uncharacterized protein2.5e-1240.95Show/hide
Query:  KSLNNPSSPFLQLPHTILQSSSLNPNPKIPSNPQTTLHQFRSPITSARMNYNRPASDTI---LNRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFG
        KS   PS   ++    + + +  N   K+    ++  ++ ++P  +   N++      I    +RMVRFMEKDDPNLRHPYDWY Y EF PYSWRG+V G
Subjt:  KSLNNPSSPFLQLPHTILQSSSLNPNPKIPSNPQTTLHQFRSPITSARMNYNRPASDTI---LNRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFG

Query:  ESIRG
        + IRG
Subjt:  ESIRG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G14900.1 unknown protein2.0e-1457.63Show/hide
Query:  NRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFGESIRGGEFISISNCSGSDDNHD
        +RMVRFM+KDDP LRHPYDW+ Y EF PYSWRGVV G+ +RG          G  +NH+
Subjt:  NRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFGESIRGGEFISISNCSGSDDNHD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTCCAAATTTCACTCTCTCTAAATCCCTAAACAACCCTTCATCTCCATTCCTCCAGCTTCCTCACACCATTCTCCAATCATCTTCTTTAAACCCTAATCCTAA
AATCCCATCAAACCCACAAACCACTCTCCATCAATTCCGCTCGCCGATAACTTCAGCAAGGATGAACTACAACAGACCAGCCTCGGATACGATACTCAATAGGATGGTCC
GATTCATGGAGAAAGACGACCCGAATCTGCGTCATCCCTACGACTGGTACACGTACGACGAGTTCATCCCGTACTCGTGGCGTGGAGTTGTCTTTGGCGAGTCTATTCGC
GGCGGAGAGTTCATCTCCATTTCTAATTGCAGCGGCAGCGACGACAACCACGACTTCAGCGACGACGATCATCAAAATAGTTGTTGGCAGTGGTTGTTGGTAGGTGGCGG
TGAGTGGTCGGAGGAGGTGGCGGGCGACACCAAGTGGTCGAAAGCCTTGATTAATTCGCCTTTTCTTGCCAATAAGATTGAAAATGCAGCAACCCTCTTGTGTGAACACC
ACCAATCGGCTACACTGGAGCTACCAGTGGGACCTAATGGACCTACAGATCAGAAGCTCCAACGATACGAGACTAATCGGCTTAAACTCATTAACCAAGTTAGTCTCCAT
TCGTTAACTCTGGGTTACTCCACTAAAGACCCACAACTGCACTCTTCTCACTGCAGAATATTTCTGTGTCCACGGATATCGACCAATACTACAAGTCAGTCTTTCACGTG
TGTTCGTATCCCAGCTGGGTCAAATCACCGTTTTACCCCTGGTCTACATCTTCGTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACTCCAAATTTCACTCTCTCTAAATCCCTAAACAACCCTTCATCTCCATTCCTCCAGCTTCCTCACACCATTCTCCAATCATCTTCTTTAAACCCTAATCCTAA
AATCCCATCAAACCCACAAACCACTCTCCATCAATTCCGCTCGCCGATAACTTCAGCAAGGATGAACTACAACAGACCAGCCTCGGATACGATACTCAATAGGATGGTCC
GATTCATGGAGAAAGACGACCCGAATCTGCGTCATCCCTACGACTGGTACACGTACGACGAGTTCATCCCGTACTCGTGGCGTGGAGTTGTCTTTGGCGAGTCTATTCGC
GGCGGAGAGTTCATCTCCATTTCTAATTGCAGCGGCAGCGACGACAACCACGACTTCAGCGACGACGATCATCAAAATAGTTGTTGGCAGTGGTTGTTGGTAGGTGGCGG
TGAGTGGTCGGAGGAGGTGGCGGGCGACACCAAGTGGTCGAAAGCCTTGATTAATTCGCCTTTTCTTGCCAATAAGATTGAAAATGCAGCAACCCTCTTGTGTGAACACC
ACCAATCGGCTACACTGGAGCTACCAGTGGGACCTAATGGACCTACAGATCAGAAGCTCCAACGATACGAGACTAATCGGCTTAAACTCATTAACCAAGTTAGTCTCCAT
TCGTTAACTCTGGGTTACTCCACTAAAGACCCACAACTGCACTCTTCTCACTGCAGAATATTTCTGTGTCCACGGATATCGACCAATACTACAAGTCAGTCTTTCACGTG
TGTTCGTATCCCAGCTGGGTCAAATCACCGTTTTACCCCTGGTCTACATCTTCGTCCTTAA
Protein sequenceShow/hide protein sequence
MATPNFTLSKSLNNPSSPFLQLPHTILQSSSLNPNPKIPSNPQTTLHQFRSPITSARMNYNRPASDTILNRMVRFMEKDDPNLRHPYDWYTYDEFIPYSWRGVVFGESIR
GGEFISISNCSGSDDNHDFSDDDHQNSCWQWLLVGGGEWSEEVAGDTKWSKALINSPFLANKIENAATLLCEHHQSATLELPVGPNGPTDQKLQRYETNRLKLINQVSLH
SLTLGYSTKDPQLHSSHCRIFLCPRISTNTTSQSFTCVRIPAGSNHRFTPGLHLRP