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Lag0041480 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041480
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr13:18734027..18734539
RNA-Seq ExpressionLag0041480
SyntenyLag0041480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CCA66054.1 hypothetical protein [Beta vulgaris subsp. vulgaris]1.6e-0835.4Show/hide
Query:  WKQRSMDLDRVLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSVTDEMNSKLLRPFQQEELELALKQIHPNKALG--------------LVGADVVNCYL
        W++   + D +  +   YF  I+T+SNP +  ++  M  + P VT+E N KLL PF ++E+  AL+Q+HP KA G              +VG DV +   
Subjt:  WKQRSMDLDRVLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSVTDEMNSKLLRPFQQEELELALKQIHPNKALG--------------LVGADVVNCYL

Query:  NILNNRVSPSPLN
        NIL+   SPS +N
Subjt:  NILNNRVSPSPLN

XP_010686122.1 PREDICTED: uncharacterized protein LOC104900404 [Beta vulgaris subsp. vulgaris]1.2e-0834.17Show/hide
Query:  LVEEEMYWKQRSMDLDRVLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSVTDEMNSKLLRPFQQEELELALKQIHPNKALG--------------LVGA
        L +E   W++   +L+   RL++ YF  I+T+S+P    +D+ +  V  SVT E N  LL+P+ +EE+  ALKQ+HP KA G              ++G 
Subjt:  LVEEEMYWKQRSMDLDRVLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSVTDEMNSKLLRPFQQEELELALKQIHPNKALG--------------LVGA

Query:  DVVNCYLNILNNRVSPSPLN
        +V +   NIL++   PS +N
Subjt:  DVVNCYLNILNNRVSPSPLN

XP_012842345.1 PREDICTED: uncharacterized protein LOC105962578 [Erythranthe guttata]5.0e-1035.4Show/hide
Query:  WKQRSMDLDRVLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSVTDEMNSKLLRPFQQEELELALKQIHPNKALG--------------LVGADVVNCYL
        WK    D++++   I  YF HI+ ++NP E EID+ + H  P VT E N  L  PF  +E+  A+ Q+ P K+ G              ++G++V++C L
Subjt:  WKQRSMDLDRVLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSVTDEMNSKLLRPFQQEELELALKQIHPNKALG--------------LVGADVVNCYL

Query:  NILNNRVSPSPLN
          LNN+  PS LN
Subjt:  NILNNRVSPSPLN

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]2.5e-0932.35Show/hide
Query:  QNAEERLESLLVEEEMYWKQRSMDL-----DR----------------------------------VLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSV
        Q A   +  LL EEE++W+QRS DL     DR                                  V+ +IE YF  ++++S P    I+Q    +   V
Subjt:  QNAEERLESLLVEEEMYWKQRSMDL-----DR----------------------------------VLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSV

Query:  TDEMNSKLLRPFQQEELELALKQIHPNKALG--------------LVGADVVNCYLNILNNRVSPSPLNE
        +   N  LL+PF +EE+ +AL QIHP+KALG              +VG DV  C LNILNN +    L+E
Subjt:  TDEMNSKLLRPFQQEELELALKQIHPNKALG--------------LVGADVVNCYLNILNNRVSPSPLNE

XP_042950087.1 uncharacterized protein LOC122282202 [Carya illinoinensis]1.2e-0833.87Show/hide
Query:  LESLLVEEEMYWKQRSMDLDRVLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSVTDEMNSKLLRPFQQEELELALKQIHPNKA--------------LG
        ++  L  +E+ WKQRS   D++  LI  YF+ ++T ++ +  +++  +  V   VT EMN +LL+P+  EE+E+ALKQ+HP++A               G
Subjt:  LESLLVEEEMYWKQRSMDLDRVLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSVTDEMNSKLLRPFQQEELELALKQIHPNKA--------------LG

Query:  LVGADVVNCYLNILNNRVSPSPLN
        ++G  + N  L+ LN+ + PS LN
Subjt:  LVGADVVNCYLNILNNRVSPSPLN

TrEMBL top hitse value%identityAlignment
A0A2N9HZ12 Uncharacterized protein1.1e-0735.16Show/hide
Query:  LQNAEERLESLLVEEEMYWKQRS-----MDLDRVLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSVTDEMNSKLLRPFQQEELELALKQIHPNKALG--
        L+  +  +  LL +EE  W+QRS      D DR   ++ GY+E I+TTS P   +I++A+ HVP  ++  MN  L R + + E+E ALKQ+ P KA G  
Subjt:  LQNAEERLESLLVEEEMYWKQRS-----MDLDRVLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSVTDEMNSKLLRPFQQEELELALKQIHPNKALG--

Query:  ------------LVGADVVNCYLNILNN
                    +VG +V    L+ LN+
Subjt:  ------------LVGADVVNCYLNILNN

A0A6J1DAR4 uncharacterized protein LOC1110189541.2e-0932.35Show/hide
Query:  QNAEERLESLLVEEEMYWKQRSMDL-----DR----------------------------------VLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSV
        Q A   +  LL EEE++W+QRS DL     DR                                  V+ +IE YF  ++++S P    I+Q    +   V
Subjt:  QNAEERLESLLVEEEMYWKQRSMDL-----DR----------------------------------VLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSV

Query:  TDEMNSKLLRPFQQEELELALKQIHPNKALG--------------LVGADVVNCYLNILNNRVSPSPLNE
        +   N  LL+PF +EE+ +AL QIHP+KALG              +VG DV  C LNILNN +    L+E
Subjt:  TDEMNSKLLRPFQQEELELALKQIHPNKALG--------------LVGADVVNCYLNILNNRVSPSPLNE

A0A7N2L6Z9 Reverse transcriptase domain-containing protein4.6e-0937.96Show/hide
Query:  DLDRVLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSVTDEMNSKLLRPFQQEELELALKQIHPNKALG--------------LVGADVVNCYLNILNNR
        D D +      YFE IY+TSNP    +D+    +P  +T+EMN++L R F +EE+  ALKQIHP K+ G              +VG++V N  LN+LN  
Subjt:  DLDRVLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSVTDEMNSKLLRPFQQEELELALKQIHPNKALG--------------LVGADVVNCYLNILNNR

Query:  VSPSPLNE
        +S   +N+
Subjt:  VSPSPLNE

F4NCJ0 Reverse transcriptase domain-containing protein3.0e-0834.58Show/hide
Query:  DLDRVLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSVTDEMNSKLLRPFQQEELELALKQIHPNKALG--------------LVGADVVNCYLNILNNR
        ++D +  +   YF  I+T++NP + +++  +  V P VT+E N+ LL+PF +EEL +AL Q+HP KA G              ++G DV     +IL+  
Subjt:  DLDRVLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSVTDEMNSKLLRPFQQEELELALKQIHPNKALG--------------LVGADVVNCYLNILNNR

Query:  VSPSPLN
        +SPS +N
Subjt:  VSPSPLN

F4NCJ6 Reverse transcriptase domain-containing protein7.8e-0935.4Show/hide
Query:  WKQRSMDLDRVLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSVTDEMNSKLLRPFQQEELELALKQIHPNKALG--------------LVGADVVNCYL
        W++   + D +  +   YF  I+T+SNP +  ++  M  + P VT+E N KLL PF ++E+  AL+Q+HP KA G              +VG DV +   
Subjt:  WKQRSMDLDRVLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSVTDEMNSKLLRPFQQEELELALKQIHPNKALG--------------LVGADVVNCYL

Query:  NILNNRVSPSPLN
        NIL+   SPS +N
Subjt:  NILNNRVSPSPLN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGTTTGGGTAATACAAGATCCAGCTCCGATCTACAGAATGCAGAGGAACGACTCGAGTCTTTGTTGGTGGAGGAAGAGATGTACTGGAAACAAAGGTCCATGGA
TCTGGATAGAGTCTTGAGGCTAATAGAGGGGTATTTTGAGCACATTTATACGACATCGAACCCCTTGGAGGAGGAAATAGATCAAGCCATGTTGCATGTTCCCCCCTCAG
TTACAGATGAGATGAATAGTAAACTCCTTAGGCCGTTCCAGCAGGAAGAATTGGAACTTGCCCTAAAGCAAATCCACCCAAATAAAGCTCTCGGTCTAGTTGGGGCGGAT
GTGGTCAATTGCTATTTGAATATTCTGAATAACAGGGTTTCCCCATCTCCTCTGAACGAAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGTTTGGGTAATACAAGATCCAGCTCCGATCTACAGAATGCAGAGGAACGACTCGAGTCTTTGTTGGTGGAGGAAGAGATGTACTGGAAACAAAGGTCCATGGA
TCTGGATAGAGTCTTGAGGCTAATAGAGGGGTATTTTGAGCACATTTATACGACATCGAACCCCTTGGAGGAGGAAATAGATCAAGCCATGTTGCATGTTCCCCCCTCAG
TTACAGATGAGATGAATAGTAAACTCCTTAGGCCGTTCCAGCAGGAAGAATTGGAACTTGCCCTAAAGCAAATCCACCCAAATAAAGCTCTCGGTCTAGTTGGGGCGGAT
GTGGTCAATTGCTATTTGAATATTCTGAATAACAGGGTTTCCCCATCTCCTCTGAACGAAAGATGA
Protein sequenceShow/hide protein sequence
MESLGNTRSSSDLQNAEERLESLLVEEEMYWKQRSMDLDRVLRLIEGYFEHIYTTSNPLEEEIDQAMLHVPPSVTDEMNSKLLRPFQQEELELALKQIHPNKALGLVGAD
VVNCYLNILNNRVSPSPLNER