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Lag0041481 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041481
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr13:18734678..18734983
RNA-Seq ExpressionLag0041481
SyntenyLag0041481
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1835879.1 unnamed protein product [Ananas comosus var. bracteatus]3.9e-1850.51Show/hide
Query:  CELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANW
        C L+DLGFSGPRFTW N RPG   V ER+DR +    WR +FP   V+HL  + SDH P+L++LS    PI N   R  RFE  WLL   +KD V+  W
Subjt:  CELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANW

RYR04437.1 hypothetical protein Ahy_B06g084164 [Arachis hypogaea]2.5e-1743Show/hide
Query:  MCELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANW
        M +L+DLGF+G  FTW N +PGE  + ER+DR + T+ W++ FP   VRHL   RSDH P+L++++      +     I RFEE WL +QE K+ +  +W
Subjt:  MCELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANW

TXG57064.1 hypothetical protein EZV62_018377 [Acer yangbiense]1.3e-1843Show/hide
Query:  CELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANWD
        C L+DLGF GP+ TW N R G++ V ERIDR +   AW D+FPG  V+HL ++ SDHRP+LL+ + G +  +   R+  +FE  WL  +E    +   W+
Subjt:  CELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANWD

TXG64077.1 hypothetical protein EZV62_011071 [Acer yangbiense]2.5e-1742Show/hide
Query:  CELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANWD
        C+L+DLGF+GPR TW N R G   V ER+DR +    W D+FPG +++HL F+  DH P+L+    G+R +   G+R  +FE  WL  +E    V   W+
Subjt:  CELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANWD

XP_030922899.1 uncharacterized protein LOC115949754 [Quercus lobata]3.3e-1746Show/hide
Query:  CELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANWD
        C L+DLGFSGP+FTW N R   D++ ERIDRC    +WR ++P   V HL    SDH PVLL LS   +P+     R  RF+  WL   +F D V   W+
Subjt:  CELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANWD

TrEMBL top hitse value%identityAlignment
A0A2N9EHR8 F-box domain-containing protein1.1e-1848.48Show/hide
Query:  CELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANW
        C  MDLGF+GPRFTW N RP  D+ WER+DR + T  W  +FP   V HLD   SDH+P    L IGT PI     R+ RFEE W   Q  ++ ++A W
Subjt:  CELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANW

A0A2N9GDB5 Reverse transcriptase domain-containing protein6.4e-1947.47Show/hide
Query:  CELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANW
        C L+DLGFSGPRFTW N RPG D+ WER+DR + T  W  MFP   V HL+   SDH+P+ +N    T P+    +R  RFEE W   Q  ++ + A+W
Subjt:  CELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANW

A0A2N9I0P4 Reverse transcriptase domain-containing protein1.1e-1845.45Show/hide
Query:  CELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANW
        C  +DLGF G  FTWCN R G   +WER+DR + T  W  MFP   + H+D   SDH P+ LNL + T P  +  RR  RFEE WL     +D V+  W
Subjt:  CELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANW

A0A2N9IMU2 Reverse transcriptase domain-containing protein1.1e-1845.45Show/hide
Query:  CELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANW
        C  +DLGF G  FTWCN R G   +WER+DR + T  W  MFP   + H+D   SDH P+ LNL + T P  +  RR  RFEE WL     +D V+  W
Subjt:  CELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANW

A0A5C7HJN1 Uncharacterized protein6.4e-1943Show/hide
Query:  CELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANWD
        C L+DLGF GP+ TW N R G++ V ERIDR +   AW D+FPG  V+HL ++ SDHRP+LL+ + G +  +   R+  +FE  WL  +E    +   W+
Subjt:  CELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANWD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGAACTGATGGATTTGGGCTTTAGTGGGCCGAGATTTACATGGTGCAATTGGAGGCCAGGGGAGGATATAGTCTGGGAAAGAATTGATAGGTGTATCAGAACTGT
GGCATGGCGGGATATGTTTCCTGGATATGAGGTGAGACATCTGGACTTTAGTCGCTCAGATCATAGGCCCGTCCTGTTGAATCTGTCCATTGGGACACGACCGATTCAGA
ATGGTGGGCGCAGAATCCAAAGGTTTGAGGAGACCTGGCTGTTGTCCCAAGAGTTTAAGGATGCGGTGTCAGCCAATTGGGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTGAACTGATGGATTTGGGCTTTAGTGGGCCGAGATTTACATGGTGCAATTGGAGGCCAGGGGAGGATATAGTCTGGGAAAGAATTGATAGGTGTATCAGAACTGT
GGCATGGCGGGATATGTTTCCTGGATATGAGGTGAGACATCTGGACTTTAGTCGCTCAGATCATAGGCCCGTCCTGTTGAATCTGTCCATTGGGACACGACCGATTCAGA
ATGGTGGGCGCAGAATCCAAAGGTTTGAGGAGACCTGGCTGTTGTCCCAAGAGTTTAAGGATGCGGTGTCAGCCAATTGGGATTAG
Protein sequenceShow/hide protein sequence
MCELMDLGFSGPRFTWCNWRPGEDIVWERIDRCIRTVAWRDMFPGYEVRHLDFSRSDHRPVLLNLSIGTRPIQNGGRRIQRFEETWLLSQEFKDAVSANWD