; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041486 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041486
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr13:18787185..18790161
RNA-Seq ExpressionLag0041486
SyntenyLag0041486
Gene Ontology termsNA
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TQD72972.1 hypothetical protein C1H46_041487 [Malus baccata]1.0e-5146.96Show/hide
Query:  DLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHD
        DLG L YFLGLE+  +S+G  +HQT Y  D+L+R  M   K C T L  Q    +G++ S  +S  YR+L+G L Y  ++  DI+F V++L QF+H+P D
Subjt:  DLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHD

Query:  SHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVC-------------------------Q
         H  AAKRVLR+L GS    + F KGS     L AYS +DWAG P  R ST+G+ +FLGSNLISW +KKQSTV                          +
Subjt:  SHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVC-------------------------Q

Query:  DLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVV
        DLH    + P L CDNISAI LA +P FH RTKHVEID+H++RE V+
Subjt:  DLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVV

XP_022143489.1 uncharacterized protein LOC111013365 [Momordica charantia]8.5e-7560.56Show/hide
Query:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP
        MTDL  L+YFLGLEIS+T+NG  + Q  YTRDVL+RFG+L+ K C T ++L S TD G  CS +D RNYR+LIG+LHY  F+  DI+F V KLSQF+H+P
Subjt:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP

Query:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTV-------------------------
         +SHLVAAKR+LRYL+GS+ FSIMF++ SS+  RLHA+S SDWAGD   R STSGFVIFLGSN IS  SKKQSTV                         
Subjt:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTV-------------------------

Query:  CQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRK
         +DLHV+S + P+L CDN SAIQLA++P FHGRTKHVEIDFHFVRE+VVRK
Subjt:  CQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRK

XP_022143496.1 uncharacterized protein LOC111013373 [Momordica charantia]2.0e-5549.8Show/hide
Query:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP
        MTDLG L+YFLGLEIS +S G LVHQT YTRD+L+RFGML  KSC T LAL +    G  CS +D++NYRALIGAL+Y  FS  DISF +SKLSQF+H P
Subjt:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP

Query:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQST-------------------------V
         D HL  AKR               R G                 DP  R STS FV+FLG N I W +KKQ+T                         +
Subjt:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQST-------------------------V

Query:  CQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRK
         +DL+++S +PPIL CD++SAIQLAR+P FH +TKHV IDFHFVRE++ RK
Subjt:  CQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRK

XP_022152156.1 uncharacterized protein LOC111019945 [Momordica charantia]7.4e-7156.18Show/hide
Query:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP
        MTDLG L YFLGLEI++TS G LV+Q  YTRD+LKRFGML+ K C T LAL + +D G  CS +D+RNYR+LIGA +Y  FS  DI+F VSKLSQ +H P
Subjt:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP

Query:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTV-------------------------
           HL AAKR+LRYL G++   ++FR+  ++  +LHA+S SDWAGD + R ST+G VIFLGSN ISW +KKQ+TV                         
Subjt:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTV-------------------------

Query:  CQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRK
         +DL V+S++ PIL CDNIS IQLA +P FHG+TKHVEIDFHFVRE+V+RK
Subjt:  CQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRK

XP_022154318.1 uncharacterized protein LOC111021613 [Momordica charantia]1.0e-5155.44Show/hide
Query:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP
        MTDLG LRYFLGLE+SH+S G  V+Q  Y RDVL RFGML  K C T++AL +P+D G+ C+ +D+ NY A++GAL Y  FS  DI+F V KLSQ +H+P
Subjt:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP

Query:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSS--SFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVCQDLHVYSYEPPILLC
          SHL+ AKRVLRY+ GS+  S++F+KG S     RL A+S SDWAGDP YR ST+GFV+FL SN ISW  KKQ+TV +      Y    + C
Subjt:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSS--SFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVCQDLHVYSYEPPILLC

TrEMBL top hitse value%identityAlignment
A0A2N9F8I7 Reverse transcriptase Ty1/copia-type domain-containing protein2.8e-5545.42Show/hide
Query:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP
        + DLG L YFLGL++ + S GF VHQT Y  D+L+RF M N K   T  +  S           D  ++R+L+GAL Y  F+  D+SF V+++ QF+HSP
Subjt:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP

Query:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQST-------------------------V
         D+HL+AAKR+LRY+ GS+   ++F+ GS     L AY+ +DWAGDP+ R STSG+V+FLGS  I+W SKKQ T                         V
Subjt:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQST-------------------------V

Query:  CQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRK
         +DL ++   PPIL CDN+SA+ LA +P FH RTKH+E+D+HF+RE+VVR+
Subjt:  CQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRK

A0A2N9HLR0 Uncharacterized protein2.8e-5545.42Show/hide
Query:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP
        + DLG L YFLGL++ + S GF VHQT Y  D+L+RF M N K   T  +  S           D  ++R+L+GAL Y  F+  D+SF V+++ QF+HSP
Subjt:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP

Query:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQST-------------------------V
         D+HL+AAKR+LRY+ GS+   ++F+ GS     L AY+ +DWAGDP+ R STSG+V+FLGS  I+W SKKQ T                         V
Subjt:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQST-------------------------V

Query:  CQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRK
         +DL ++   PPIL CDN+SA+ LA +P FH RTKH+E+D+HF+RE+VVR+
Subjt:  CQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRK

A0A6J1CPG5 uncharacterized protein LOC1110133654.1e-7560.56Show/hide
Query:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP
        MTDL  L+YFLGLEIS+T+NG  + Q  YTRDVL+RFG+L+ K C T ++L S TD G  CS +D RNYR+LIG+LHY  F+  DI+F V KLSQF+H+P
Subjt:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP

Query:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTV-------------------------
         +SHLVAAKR+LRYL+GS+ FSIMF++ SS+  RLHA+S SDWAGD   R STSGFVIFLGSN IS  SKKQSTV                         
Subjt:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTV-------------------------

Query:  CQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRK
         +DLHV+S + P+L CDN SAIQLA++P FHGRTKHVEIDFHFVRE+VVRK
Subjt:  CQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRK

A0A6J1CQE8 uncharacterized protein LOC1110133739.5e-5649.8Show/hide
Query:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP
        MTDLG L+YFLGLEIS +S G LVHQT YTRD+L+RFGML  KSC T LAL +    G  CS +D++NYRALIGAL+Y  FS  DISF +SKLSQF+H P
Subjt:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP

Query:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQST-------------------------V
         D HL  AKR               R G                 DP  R STS FV+FLG N I W +KKQ+T                         +
Subjt:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQST-------------------------V

Query:  CQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRK
         +DL+++S +PPIL CD++SAIQLAR+P FH +TKHV IDFHFVRE++ RK
Subjt:  CQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRK

A0A6J1DGS4 uncharacterized protein LOC1110199453.6e-7156.18Show/hide
Query:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP
        MTDLG L YFLGLEI++TS G LV+Q  YTRD+LKRFGML+ K C T LAL + +D G  CS +D+RNYR+LIGA +Y  FS  DI+F VSKLSQ +H P
Subjt:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP

Query:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTV-------------------------
           HL AAKR+LRYL G++   ++FR+  ++  +LHA+S SDWAGD + R ST+G VIFLGSN ISW +KKQ+TV                         
Subjt:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTV-------------------------

Query:  CQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRK
         +DL V+S++ PIL CDNIS IQLA +P FHG+TKHVEIDFHFVRE+V+RK
Subjt:  CQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRK

SwissProt top hitse value%identityAlignment
P04146 Copia protein5.4e-2430.35Show/hide
Query:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSL-------ALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLR-DISFVVSK
        MTDL  +++F+G+ I    +   + Q+ Y + +L +F M N  +  T L        L S  D    C        R+LIG L Y     R D++  V+ 
Subjt:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSL-------ALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLR-DISFVVSK

Query:  LSQFLHSPHDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVI-FLGSNLISWRSKKQSTVCQDLHVYSY-------
        LS++    +       KRVLRYL G+I   ++F+K  +   ++  Y  SDWAG  + R ST+G++      NLI W +K+Q++V        Y       
Subjt:  LSQFLHSPHDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVI-FLGSNLISWRSKKQSTVCQDLHVYSY-------

Query:  -----------------EPPILLC-DNISAIQLARDPAFHGRTKHVEIDFHFVREQV
                         E PI +  DN   I +A +P+ H R KH++I +HF REQV
Subjt:  -----------------EPPILLC-DNISAIQLARDPAFHGRTKHVEIDFHFVREQV

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.7e-2229.66Show/hide
Query:  MTDLGTLRYFLGLEI--SHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLA-------LQSPT---DAGNVCSPDDSRNYRALIGALHYWNFSLR-DIS
        M DLG  +  LG++I    TS    + Q  Y   VL+RF M N K   T LA          PT   + GN+        Y + +G+L Y     R DI+
Subjt:  MTDLGTLRYFLGLEI--SHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLA-------LQSPT---DAGNVCSPDDSRNYRALIGALHYWNFSLR-DIS

Query:  FVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVC-----------
          V  +S+FL +P   H  A K +LRYL G+ G  + F     S   L  Y+ +D AGD   R S++G++       ISW+SK Q  V            
Subjt:  FVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVC-----------

Query:  --------------QDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRKRFRASVKASLVQRPIQEINRPTDRSR
                      Q+L ++  E  ++ CD+ SAI L+++  +H RTKH+++ +H++RE V  +  +  +K S  + P   + +   R++
Subjt:  --------------QDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRKRFRASVKASLVQRPIQEINRPTDRSR

P92519 Uncharacterized mitochondrial protein AtMg008106.2e-2835.92Show/hide
Query:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP
        M DLG + YFLG++I    +G  + QT Y   +L   GML+ K   T L L+  +       PD S ++R+++GAL Y   +  DIS+ V+ + Q +H P
Subjt:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP

Query:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVCQDLHVYSYEPPILLCDNI--SAIQ
          +     KRVLRY+ G+I   +   K S     + A+  SDWAG    R ST+GF  FLG N+ISW +K+Q TV +      Y    L    +  S+  
Subjt:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVCQDLHVYSYEPPILLCDNI--SAIQ

Query:  LARDPA
         +RDP+
Subjt:  LARDPA

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.7e-4135.56Show/hide
Query:  LRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLV
        L YFLG+E      G  + Q  Y  D+L R  M+  K   T +A        +     D   YR ++G+L Y  F+  DIS+ V++LSQF+H P + HL 
Subjt:  LRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLV

Query:  AAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVCQ-------------------------DLHV
        A KR+LRYLAG+    I  +KG++    LHAYS +DWAGD     ST+G++++LG + ISW SKKQ  V +                         +L +
Subjt:  AAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVCQ-------------------------DLHV

Query:  YSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRKRFRASVKASLVQRPIQEINRPTDRS
            PP++ CDN+ A  L  +P FH R KH+ ID+HF+R QV     R  V  S   +    + +P  R+
Subjt:  YSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRKRFRASVKASLVQRPIQEINRPTDRS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE27.5e-4235.69Show/hide
Query:  LRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLV
        L YFLG+E      G  + Q  YT D+L R  ML  K   T +A        +     D   YR ++G+L Y  F+  D+S+ V++LSQ++H P D H  
Subjt:  LRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLV

Query:  AAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVCQ-------------------------DLHV
        A KRVLRYLAG+    I  +KG++    LHAYS +DWAGD     ST+G++++LG + ISW SKKQ  V +                         +L +
Subjt:  AAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVCQ-------------------------DLHV

Query:  YSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRKRFRASVKASLVQRPIQEINRPTDR
            PP++ CDN+ A  L  +P FH R KH+ +D+HF+R QV     R  V  S   +    + +P  R
Subjt:  YSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRKRFRASVKASLVQRPIQEINRPTDR

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.6e-3434.54Show/hide
Query:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP
        + DLG L+YFLGLEI+ ++ G  + Q  Y  D+L   G+L  K     +       A +     D++ YR LIG L Y   +  DISF V+KLSQF  +P
Subjt:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP

Query:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVC------------------------
          +H  A  ++L Y+ G++G  + +   S +  +L  +S + +      R ST+G+ +FLG++LISW+SKKQ  V                         
Subjt:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVC------------------------

Query:  -QDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVV
         ++L +   +P +L CDN +AI +A +  FH RTKH+E D H VRE+ V
Subjt:  -QDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVV

ATMG00240.1 Gag-Pol-related retrotransposon family protein8.9e-0632.91Show/hide
Query:  YWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGF
        Y   +  D++F V++LSQF  +   + + A  +VL Y+ G++G  + +   ++S  +L A++ SDWA  P  R S +GF
Subjt:  YWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGF

ATMG00810.1 DNA/RNA polymerases superfamily protein4.4e-2935.92Show/hide
Query:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP
        M DLG + YFLG++I    +G  + QT Y   +L   GML+ K   T L L+  +       PD S ++R+++GAL Y   +  DIS+ V+ + Q +H P
Subjt:  MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSP

Query:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVCQDLHVYSYEPPILLCDNI--SAIQ
          +     KRVLRY+ G+I   +   K S     + A+  SDWAG    R ST+GF  FLG N+ISW +K+Q TV +      Y    L    +  S+  
Subjt:  HDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVCQDLHVYSYEPPILLCDNI--SAIQ

Query:  LARDPA
         +RDP+
Subjt:  LARDPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGATTTGGGTACTTTGCGATATTTTCTTGGCCTTGAAATCTCTCATACTTCTAATGGTTTTTTGGTACATCAAACTAATTATACCAGGGATGTTCTCAAACGTTT
TGGTATGCTTAATGAAAAATCTTGTGGTACTTCTTTGGCTTTACAGTCTCCTACTGATGCTGGAAATGTTTGCTCTCCTGATGATAGTCGTAATTACAGGGCTCTTATTG
GTGCTCTTCATTACTGGAATTTTAGTCTACGAGATATCTCGTTTGTTGTTAGCAAGCTTTCTCAATTTCTGCATTCTCCTCATGATTCTCATCTTGTGGCTGCTAAAAGA
GTGTTGCGTTATCTAGCTGGTTCTATTGGCTTCAGCATTATGTTTCGAAAAGGATCTTCTTCTTTTGCTCGGTTGCATGCTTATTCTTATTCAGATTGGGCTGGTGACCC
TCTTTATCGTTGTTCCACGTCTGGCTTTGTAATTTTCCTTGGTTCTAATCTTATTTCATGGAGATCTAAGAAACAATCTACCGTGTGTCAAGATCTTCATGTCTATAGTT
ATGAACCTCCTATTTTATTATGTGACAATATCTCTGCTATTCAATTGGCTCGTGATCCTGCTTTTCATGGTCGTACTAAGCATGTGGAGATTGATTTCCACTTTGTTCGT
GAACAAGTTGTTCGAAAAAGATTTCGAGCTTCGGTCAAAGCGAGCCTAGTTCAGCGGCCGATCCAAGAGATCAACAGGCCAACCGACCGATCAAGAAGATCAACAAGTCA
GCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGATCAAGA
GGATCAATAAGTCAGCAGACCGATCATCCAAAAGGATCAAAAAGCTAACAAGTCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTTAACAGG
CCGATCATCCAAGAAGATCAACAAGCCAACAAATCGATCCAAGAGATCATCAAGCCAACAGGCCGATCATTCAAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATC
ATCAAGCCACCAGGTTGATCATCCAAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCAAGCCAACAGGCCGATCATCCAAGAATATCAACAAGCCAACAAGC
TGATCCAAGAGATCATCAAGCCAACAGGCCGATCATCCAAGAAGATTAACAAACCAACAAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGATTTGGGTACTTTGCGATATTTTCTTGGCCTTGAAATCTCTCATACTTCTAATGGTTTTTTGGTACATCAAACTAATTATACCAGGGATGTTCTCAAACGTTT
TGGTATGCTTAATGAAAAATCTTGTGGTACTTCTTTGGCTTTACAGTCTCCTACTGATGCTGGAAATGTTTGCTCTCCTGATGATAGTCGTAATTACAGGGCTCTTATTG
GTGCTCTTCATTACTGGAATTTTAGTCTACGAGATATCTCGTTTGTTGTTAGCAAGCTTTCTCAATTTCTGCATTCTCCTCATGATTCTCATCTTGTGGCTGCTAAAAGA
GTGTTGCGTTATCTAGCTGGTTCTATTGGCTTCAGCATTATGTTTCGAAAAGGATCTTCTTCTTTTGCTCGGTTGCATGCTTATTCTTATTCAGATTGGGCTGGTGACCC
TCTTTATCGTTGTTCCACGTCTGGCTTTGTAATTTTCCTTGGTTCTAATCTTATTTCATGGAGATCTAAGAAACAATCTACCGTGTGTCAAGATCTTCATGTCTATAGTT
ATGAACCTCCTATTTTATTATGTGACAATATCTCTGCTATTCAATTGGCTCGTGATCCTGCTTTTCATGGTCGTACTAAGCATGTGGAGATTGATTTCCACTTTGTTCGT
GAACAAGTTGTTCGAAAAAGATTTCGAGCTTCGGTCAAAGCGAGCCTAGTTCAGCGGCCGATCCAAGAGATCAACAGGCCAACCGACCGATCAAGAAGATCAACAAGTCA
GCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGATCAAGA
GGATCAATAAGTCAGCAGACCGATCATCCAAAAGGATCAAAAAGCTAACAAGTCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTTAACAGG
CCGATCATCCAAGAAGATCAACAAGCCAACAAATCGATCCAAGAGATCATCAAGCCAACAGGCCGATCATTCAAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATC
ATCAAGCCACCAGGTTGATCATCCAAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCAAGCCAACAGGCCGATCATCCAAGAATATCAACAAGCCAACAAGC
TGATCCAAGAGATCATCAAGCCAACAGGCCGATCATCCAAGAAGATTAACAAACCAACAAGCTGA
Protein sequenceShow/hide protein sequence
MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKR
VLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVCQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVR
EQVVRKRFRASVKASLVQRPIQEINRPTDRSRRSTSQQADHPRRSTSQPTDQEDQQVSRPIIQEDQQANRSIKRINKSADRSSKRIKKLTSRSNRSSSQQADPRDHQVNR
PIIQEDQQANKSIQEIIKPTGRSFKKINKPTSRSKRSSSHQVDHPRRSTSQQADPRDHQANRPIIQEYQQANKLIQEIIKPTGRSSKKINKPTS