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Lag0041490 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041490
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr13:18877487..18880035
RNA-Seq ExpressionLag0041490
SyntenyLag0041490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]4.5e-1444.83Show/hide
Query:  QGAY------LKSEANTWLGFIKLRLLPTAHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILFDR
        QGAY      L   A  W  F+K  LLPT H  TVS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC  A  P +  +  L + 
Subjt:  QGAY------LKSEANTWLGFIKLRLLPTAHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILFDR

Query:  GIIDTPNLARLQRTQE
        G ID   +AR+  TQE
Subjt:  GIIDTPNLARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]5.3e-2336.54Show/hide
Query:  QGAY------LKSEANTWLGFIKLRLLPTAHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILFDR
        QGAY      L   A  W  F+K RLLPT H  TVS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC  A  P +  +  L + 
Subjt:  QGAY------LKSEANTWLGFIKLRLLPTAHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILFDR

Query:  GIIDTPNLARL--------------QRTQEARHGGLVCGIHQNLEQLTLSASRQE-----------YAERQAQTYWTYAKRRDDTLLRVLQSNFFKPYQV
        G ID   +AR+               R   A        I Q L+ L    S+QE           +  +Q Q +W Y+K RD  L + LQ+NF +P   
Subjt:  GIIDTPNLARL--------------QRTQEARHGGLVCGIHQNLEQLTLSASRQE-----------YAERQAQTYWTYAKRRDDTLLRVLQSNFFKPYQV

Query:  FPMFPDDL
        FP FP ++
Subjt:  FPMFPDDL

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.5e-2236.87Show/hide
Query:  LKSEANTWLGFIKLRLLPTAHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILFDRGIIDTPNLAR
        L   A  W  F+K RLLPT H  TVS+DR+LL++++L   SI+VG++I SEI  C  +K G LFFP+ IT LC  A  P +  +  L   G ID   +AR
Subjt:  LKSEANTWLGFIKLRLLPTAHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILFDRGIIDTPNLAR

Query:  L--------------QRTQEARHGGLVCGIHQNLEQLTLSASRQE-----------YAERQAQTYWTYAKRRDDTLLRVLQSNFFKPYQVFPMFPDDL
        +               R   A        I Q L+ L    S+QE           +  +Q Q +W Y+K RD  L + LQ+NF +P   FP FP +L
Subjt:  L--------------QRTQEARHGGLVCGIHQNLEQLTLSASRQE-----------YAERQAQTYWTYAKRRDDTLLRVLQSNFFKPYQVFPMFPDDL

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.1e-2337.56Show/hide
Query:  QGAY------LKSEANTWLGFIKLRLLPTAHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILFDR
        QGAY      L   A  W  F+K RLLPT H   VS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC  A  P +  +  L + 
Subjt:  QGAY------LKSEANTWLGFIKLRLLPTAHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILFDR

Query:  GIIDTPNLARL--------------QRTQEARHGGLVCGIHQNLEQLTLSASRQEYAERQAQTYWTYAKRRDDTLLRVLQSNFFKPYQVFPMFPDDL
        G ID   +AR+               R   A        + Q L+ L    S+QE+  +Q Q +W Y+K RD  L + LQ+NF +P   FP FP ++
Subjt:  GIIDTPNLARL--------------QRTQEARHGGLVCGIHQNLEQLTLSASRQEYAERQAQTYWTYAKRRDDTLLRVLQSNFFKPYQVFPMFPDDL

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]6.9e-1529.57Show/hide
Query:  RTFQGAYLKSEANTWLGFIKLRLLPTAHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVIL---FDR
        RT++ + LK  AN W+ FI+  L PT HDS++S ++++L++ ++   +I+VGK++   I  C +++ GKLFFP+ I  L  +AGVP   +D+++    ++
Subjt:  RTFQGAYLKSEANTWLGFIKLRLLPTAHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVIL---FDR

Query:  GIIDTPNLARLQRTQEARHGGLVCGIHQNLEQ-LTLSASRQEYAERQAQTYWTYAKRRDDTLLRVLQSNFFKPYQVFPMFPDDLFN
          ID   +++L+   E   G  + G+ + +E+ L  S S  ++   Q        K     L   L+++  K  + F    +DL N
Subjt:  GIIDTPNLARLQRTQEARHGGLVCGIHQNLEQ-LTLSASRQEYAERQAQTYWTYAKRRDDTLLRVLQSNFFKPYQVFPMFPDDLFN

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.2e-1444.83Show/hide
Query:  QGAY------LKSEANTWLGFIKLRLLPTAHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILFDR
        QGAY      L   A  W  F+K  LLPT H  TVS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC  A  P +  +  L + 
Subjt:  QGAY------LKSEANTWLGFIKLRLLPTAHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILFDR

Query:  GIIDTPNLARLQRTQE
        G ID   +AR+  TQE
Subjt:  GIIDTPNLARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)2.6e-2336.54Show/hide
Query:  QGAY------LKSEANTWLGFIKLRLLPTAHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILFDR
        QGAY      L   A  W  F+K RLLPT H  TVS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC  A  P +  +  L + 
Subjt:  QGAY------LKSEANTWLGFIKLRLLPTAHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILFDR

Query:  GIIDTPNLARL--------------QRTQEARHGGLVCGIHQNLEQLTLSASRQE-----------YAERQAQTYWTYAKRRDDTLLRVLQSNFFKPYQV
        G ID   +AR+               R   A        I Q L+ L    S+QE           +  +Q Q +W Y+K RD  L + LQ+NF +P   
Subjt:  GIIDTPNLARL--------------QRTQEARHGGLVCGIHQNLEQLTLSASRQE-----------YAERQAQTYWTYAKRRDDTLLRVLQSNFFKPYQV

Query:  FPMFPDDL
        FP FP ++
Subjt:  FPMFPDDL

A0A2P5CEY2 Uncharacterized protein7.4e-2336.87Show/hide
Query:  LKSEANTWLGFIKLRLLPTAHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILFDRGIIDTPNLAR
        L   A  W  F+K RLLPT H  TVS+DR+LL++++L   SI+VG++I SEI  C  +K G LFFP+ IT LC  A  P +  +  L   G ID   +AR
Subjt:  LKSEANTWLGFIKLRLLPTAHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILFDRGIIDTPNLAR

Query:  L--------------QRTQEARHGGLVCGIHQNLEQLTLSASRQE-----------YAERQAQTYWTYAKRRDDTLLRVLQSNFFKPYQVFPMFPDDL
        +               R   A        I Q L+ L    S+QE           +  +Q Q +W Y+K RD  L + LQ+NF +P   FP FP +L
Subjt:  L--------------QRTQEARHGGLVCGIHQNLEQLTLSASRQE-----------YAERQAQTYWTYAKRRDDTLLRVLQSNFFKPYQVFPMFPDDL

A0A2P5CPE8 Uncharacterized protein3.7e-1442.02Show/hide
Query:  QGAY------LKSEANTWLGFIKLRLLPTAHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILFDR
        QGAY      L   A  W  F+K RLLPT H  TVS++RVLL++++L   SI+VG+II  EI     +K G LFFP+ IT +C  A  P +  +  L + 
Subjt:  QGAY------LKSEANTWLGFIKLRLLPTAHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILFDR

Query:  GIIDTPNLARLQRTQEARH
        G ID   +AR+ +   A H
Subjt:  GIIDTPNLARLQRTQEARH

A0A2P5DXM3 Uncharacterized protein5.2e-2437.56Show/hide
Query:  QGAY------LKSEANTWLGFIKLRLLPTAHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILFDR
        QGAY      L   A  W  F+K RLLPT H   VS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC  A  P +  +  L + 
Subjt:  QGAY------LKSEANTWLGFIKLRLLPTAHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILFDR

Query:  GIIDTPNLARL--------------QRTQEARHGGLVCGIHQNLEQLTLSASRQEYAERQAQTYWTYAKRRDDTLLRVLQSNFFKPYQVFPMFPDDL
        G ID   +AR+               R   A        + Q L+ L    S+QE+  +Q Q +W Y+K RD  L + LQ+NF +P   FP FP ++
Subjt:  GIIDTPNLARL--------------QRTQEARHGGLVCGIHQNLEQLTLSASRQEYAERQAQTYWTYAKRRDDTLLRVLQSNFFKPYQVFPMFPDDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCCTACATGGATGCTTTGGATCATTGCATCTGTATCGAATACAAAGTGGGTCGTATCACATAGTGTTACCAGGATAAGTAACAATAACTCTTTATTGTACAAACC
TCAACAACAACGTATTGAGACAAGTAAATTGCAGGACAAGTCTGATGCTGCCACGTGTCGCGCATGGGGAAATCCAAGGAAAAAGAAAACATCGGAGGAGAGAGAAACTA
AGAGGCGAAGAAGACAACAGAGGGCTGAAGTTGAAGAGGTAGTACAGAAGGTAGTTGAAGACATTGCTGATGTTGTGGTTGATGAGGAGAATCCAAAGGAACCTGAGGAT
CAAAACCCTGAACAGATTGAACCGACAGTCGAAAATCCACAAGAAGTTCCAGAAAAACAGACGGAAGATGAGCAAGAGAGAGGCAACGAACAGGGAGTTCAGAAGCAAGA
AGCTCAGGTTGAGTTTATTATGCCGGAGGTTCCCCGTCATCGCCATCGGAAGCAGAAAGTCGGTCGTGTCAAGGTAGTTTGGACTGATACTGCTTCATCGTCGACAACTG
ATTCTGAGAAAGAAAATACGGAGAGAGAAGAGCAAGAGAAAAAGGAGGCAGATGATAAACCAAGAGAAGAAACAGAAAAGAAAGCAGCGGAAGAGATTTTGGCAAAGCAT
CAAGAAGACAAGGGCAAGGGAATTGTTGAAGCAACGGATGAACCAGAAGAGGAAACAGAAGGAATACCGTTCATTCGCTTCGTTAATGAACTTGCCAGAGCAAAATACAG
GGAAATGCTAAAAAGGGATTTCTTATTCGAGAGAGGTTTCGGTGAAGATTTACCGCATTTCTTGAGGGTTGGGATCGCGAATCATGGCTGGAGTAAATTCTGTGCAAAGC
CAGATCCATTGAATTCGAACATTGTTCAGAAGCGCACATTCCAAGGGGCTTATCTGAAAAGTGAGGCCAACACATGGTTGGGCTTCATTAAGTTGCGCCTGCTCCCAACA
GCTCATGATTCAACGGTGTCTCGAGACCGAGTGCTTCTGGTATTCGCCATTCTTCGTTCTTTAAGTATTGATGTTGGAAAAATTATTTCGAGTGAAATTTATAATTGCTG
GCGCAAAAAGGTGGGGAAGCTGTTTTTCCCAAACACGATCACGATGTTATGCAGCAGGGCAGGAGTGCCCACGGTTCCAGAGGATGTGATTTTGTTTGACAGGGGGATAA
TAGATACGCCTAATCTGGCTCGGCTTCAGCGCACGCAGGAGGCACGCCATGGTGGGCTAGTGTGTGGAATCCATCAAAACCTAGAGCAGCTGACACTATCGGCCAGTAGG
CAAGAGTATGCTGAAAGGCAAGCTCAAACCTACTGGACCTATGCTAAGAGGAGAGATGACACACTTTTGAGGGTCTTGCAATCCAATTTCTTCAAACCATACCAGGTCTT
CCCTATGTTCCCCGATGATTTATTTAACCCCTGGATTCCGCCACCGCCAGTAGAGAGAGAAGAAGAGGAAAATGAAGAACAGGGTCAGGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCCTACATGGATGCTTTGGATCATTGCATCTGTATCGAATACAAAGTGGGTCGTATCACATAGTGTTACCAGGATAAGTAACAATAACTCTTTATTGTACAAACC
TCAACAACAACGTATTGAGACAAGTAAATTGCAGGACAAGTCTGATGCTGCCACGTGTCGCGCATGGGGAAATCCAAGGAAAAAGAAAACATCGGAGGAGAGAGAAACTA
AGAGGCGAAGAAGACAACAGAGGGCTGAAGTTGAAGAGGTAGTACAGAAGGTAGTTGAAGACATTGCTGATGTTGTGGTTGATGAGGAGAATCCAAAGGAACCTGAGGAT
CAAAACCCTGAACAGATTGAACCGACAGTCGAAAATCCACAAGAAGTTCCAGAAAAACAGACGGAAGATGAGCAAGAGAGAGGCAACGAACAGGGAGTTCAGAAGCAAGA
AGCTCAGGTTGAGTTTATTATGCCGGAGGTTCCCCGTCATCGCCATCGGAAGCAGAAAGTCGGTCGTGTCAAGGTAGTTTGGACTGATACTGCTTCATCGTCGACAACTG
ATTCTGAGAAAGAAAATACGGAGAGAGAAGAGCAAGAGAAAAAGGAGGCAGATGATAAACCAAGAGAAGAAACAGAAAAGAAAGCAGCGGAAGAGATTTTGGCAAAGCAT
CAAGAAGACAAGGGCAAGGGAATTGTTGAAGCAACGGATGAACCAGAAGAGGAAACAGAAGGAATACCGTTCATTCGCTTCGTTAATGAACTTGCCAGAGCAAAATACAG
GGAAATGCTAAAAAGGGATTTCTTATTCGAGAGAGGTTTCGGTGAAGATTTACCGCATTTCTTGAGGGTTGGGATCGCGAATCATGGCTGGAGTAAATTCTGTGCAAAGC
CAGATCCATTGAATTCGAACATTGTTCAGAAGCGCACATTCCAAGGGGCTTATCTGAAAAGTGAGGCCAACACATGGTTGGGCTTCATTAAGTTGCGCCTGCTCCCAACA
GCTCATGATTCAACGGTGTCTCGAGACCGAGTGCTTCTGGTATTCGCCATTCTTCGTTCTTTAAGTATTGATGTTGGAAAAATTATTTCGAGTGAAATTTATAATTGCTG
GCGCAAAAAGGTGGGGAAGCTGTTTTTCCCAAACACGATCACGATGTTATGCAGCAGGGCAGGAGTGCCCACGGTTCCAGAGGATGTGATTTTGTTTGACAGGGGGATAA
TAGATACGCCTAATCTGGCTCGGCTTCAGCGCACGCAGGAGGCACGCCATGGTGGGCTAGTGTGTGGAATCCATCAAAACCTAGAGCAGCTGACACTATCGGCCAGTAGG
CAAGAGTATGCTGAAAGGCAAGCTCAAACCTACTGGACCTATGCTAAGAGGAGAGATGACACACTTTTGAGGGTCTTGCAATCCAATTTCTTCAAACCATACCAGGTCTT
CCCTATGTTCCCCGATGATTTATTTAACCCCTGGATTCCGCCACCGCCAGTAGAGAGAGAAGAAGAGGAAAATGAAGAACAGGGTCAGGAGGATTGA
Protein sequenceShow/hide protein sequence
MSPTWMLWIIASVSNTKWVVSHSVTRISNNNSLLYKPQQQRIETSKLQDKSDAATCRAWGNPRKKKTSEERETKRRRRQQRAEVEEVVQKVVEDIADVVVDEENPKEPED
QNPEQIEPTVENPQEVPEKQTEDEQERGNEQGVQKQEAQVEFIMPEVPRHRHRKQKVGRVKVVWTDTASSSTTDSEKENTEREEQEKKEADDKPREETEKKAAEEILAKH
QEDKGKGIVEATDEPEEETEGIPFIRFVNELARAKYREMLKRDFLFERGFGEDLPHFLRVGIANHGWSKFCAKPDPLNSNIVQKRTFQGAYLKSEANTWLGFIKLRLLPT
AHDSTVSRDRVLLVFAILRSLSIDVGKIISSEIYNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILFDRGIIDTPNLARLQRTQEARHGGLVCGIHQNLEQLTLSASR
QEYAERQAQTYWTYAKRRDDTLLRVLQSNFFKPYQVFPMFPDDLFNPWIPPPPVEREEEENEEQGQED