| GenBank top hits | e value | %identity | Alignment |
|---|
| OMO58663.1 reverse transcriptase [Corchorus capsularis] | 2.1e-09 | 32.58 | Show/hide |
Query: QSNRNWIPPPSDVWKFNVDAAWSDSLPETGTGVVCRGSNGKLIEASCKFLDIAMDAPKAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKT-W
Q WI P WK N DA++S S + G GVV R GK++ + + L D+ AE+ AI+ G ++A G R IIESD +A++ +NKK W
Subjt: QSNRNWIPPPSDVWKFNVDAAWSDSLPETGTGVVCRGSNGKLIEASCKFLDIAMDAPKAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKT-W
Query: ---CIVEGLVEAIWALGLCVFSIFPPKSSIIA
++E + E C F +++ +A
Subjt: ---CIVEGLVEAIWALGLCVFSIFPPKSSIIA
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| OMO67823.1 reverse transcriptase [Corchorus capsularis] | 1.3e-09 | 30.3 | Show/hide |
Query: QSNRNWIPPPSDVWKFNVDAAWSDSLPETGTGVVCRGSNGKLIEASCKFLDIAMDAPKAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKS-KTW
Q+N W PPP+ V+K N D ++ E GVV R S G++ ++CK + D ++E+ AI G+ +A+ G ++++++SDC A+ + K S TW
Subjt: QSNRNWIPPPSDVWKFNVDAAWSDSLPETGTGVVCRGSNGKLIEASCKFLDIAMDAPKAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKS-KTW
Query: ---CIVEGLVEAIWALGLCVFSIFPPKSSIIA
C++E + + LC F ++++A
Subjt: ---CIVEGLVEAIWALGLCVFSIFPPKSSIIA
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| OMO88655.1 reverse transcriptase [Corchorus capsularis] | 9.6e-10 | 32.48 | Show/hide |
Query: WIPPPSDVWKFNVDAAWSDSLPETGTGVVCRGSNGKLIEASCKFLDIAMDAPKAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGL
W+PP + K NVD ++ E G GVV R ++G +++++ + L AE+ A++ G ++A +G R I+ESDC+VA++ ++ W L
Subjt: WIPPPSDVWKFNVDAAWSDSLPETGTGVVCRGSNGKLIEASCKFLDIAMDAPKAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGL
Query: VEAIWALGL----CVFS
+ IW L L C FS
Subjt: VEAIWALGL----CVFS
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| XP_010686140.1 PREDICTED: uncharacterized protein LOC104900422 [Beta vulgaris subsp. vulgaris] | 3.3e-10 | 35.54 | Show/hide |
Query: SASSPQSNRNWIPPPSDVW-KFNVDAAWSDSLPETGTGVVCRGSNGKLIEASCKFLDIAMDAPKAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNK
S S S W PSD W K NVDA + +G GVVCR + G ++ + + + P AE RA++EGV MAK++G ++VIIESDCQ V L K
Subjt: SASSPQSNRNWIPPPSDVW-KFNVDAAWSDSLPETGTGVVCRGSNGKLIEASCKFLDIAMDAPKAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNK
Query: KSKTWCIVEGLVEAIWALGLCVFSIFPPKSSIIATWVFAARGVGNQY---WEHNQGRD--SRLWKK
+ K +++ I ++ L SS+ W F R VGN+ H Q + SR+W++
Subjt: KSKTWCIVEGLVEAIWALGLCVFSIFPPKSSIIATWVFAARGVGNQY---WEHNQGRD--SRLWKK
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| XP_024042921.1 uncharacterized protein LOC112099707 [Citrus clementina] | 4.3e-10 | 41.35 | Show/hide |
Query: ASSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGTGVVCRGSNGKLIEASCKFLDIAMDAPKAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLN--K
+S + + W PPP + +K NVDAA + G GVV R NG ++ A+ K + AE AI G+++A+S G VI ESDCQVAV+ N K
Subjt: ASSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGTGVVCRGSNGKLIEASCKFLDIAMDAPKAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLN--K
Query: KSKT
SKT
Subjt: KSKT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1R3GKQ5 Reverse transcriptase | 1.0e-09 | 32.58 | Show/hide |
Query: QSNRNWIPPPSDVWKFNVDAAWSDSLPETGTGVVCRGSNGKLIEASCKFLDIAMDAPKAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKT-W
Q WI P WK N DA++S S + G GVV R GK++ + + L D+ AE+ AI+ G ++A G R IIESD +A++ +NKK W
Subjt: QSNRNWIPPPSDVWKFNVDAAWSDSLPETGTGVVCRGSNGKLIEASCKFLDIAMDAPKAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKT-W
Query: ---CIVEGLVEAIWALGLCVFSIFPPKSSIIA
++E + E C F +++ +A
Subjt: ---CIVEGLVEAIWALGLCVFSIFPPKSSIIA
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| A0A1R3HC77 Reverse transcriptase | 6.1e-10 | 30.3 | Show/hide |
Query: QSNRNWIPPPSDVWKFNVDAAWSDSLPETGTGVVCRGSNGKLIEASCKFLDIAMDAPKAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKS-KTW
Q+N W PPP+ V+K N D ++ E GVV R S G++ ++CK + D ++E+ AI G+ +A+ G ++++++SDC A+ + K S TW
Subjt: QSNRNWIPPPSDVWKFNVDAAWSDSLPETGTGVVCRGSNGKLIEASCKFLDIAMDAPKAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKS-KTW
Query: ---CIVEGLVEAIWALGLCVFSIFPPKSSIIA
C++E + + LC F ++++A
Subjt: ---CIVEGLVEAIWALGLCVFSIFPPKSSIIA
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| A0A1R3J1E8 Reverse transcriptase | 4.6e-10 | 32.48 | Show/hide |
Query: WIPPPSDVWKFNVDAAWSDSLPETGTGVVCRGSNGKLIEASCKFLDIAMDAPKAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGL
W+PP + K NVD ++ E G GVV R ++G +++++ + L AE+ A++ G ++A +G R I+ESDC+VA++ ++ W L
Subjt: WIPPPSDVWKFNVDAAWSDSLPETGTGVVCRGSNGKLIEASCKFLDIAMDAPKAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTWCIVEGL
Query: VEAIWALGL----CVFS
+ IW L L C FS
Subjt: VEAIWALGL----CVFS
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| A0A1R3KHA2 Uncharacterized protein | 5.1e-09 | 32.28 | Show/hide |
Query: WIPPPSDVWKFNVDAAWSDSLPETGTGVVCRGSNGKLIEASCKFLDIAMDAPKAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTW----CI
W+PPP V K N DA++S E G GVV R G +I + + L D+ AE+ AI+ G +MA +G R I+ESD +A+ +NK + C+
Subjt: WIPPPSDVWKFNVDAAWSDSLPETGTGVVCRGSNGKLIEASCKFLDIAMDAPKAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNKKSKTW----CI
Query: VEGLVEAIWALGLCVFSIFPPKSSIIA
+ + E C F +++++A
Subjt: VEGLVEAIWALGLCVFSIFPPKSSIIA
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| A0A1R3KPH0 RNase H domain-containing protein | 1.4e-09 | 36.89 | Show/hide |
Query: MSASSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGTGVVCRGSNGKLIEASCKFLDIAMDAPKAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNK
++A+ Q R W+PPP D+ K NVDAA+ + E +V R SNG ++ + LD A AE+ A++ G++ AK +GC +I E DC VAV+ +N
Subjt: MSASSPQSNRNWIPPPSDVWKFNVDAAWSDSLPETGTGVVCRGSNGKLIEASCKFLDIAMDAPKAELRAIMEGVKMAKSMGCKRVIIESDCQVAVNFLNK
Query: KSKT---WCIVEGLVEAIWALG
S + W + E I A+G
Subjt: KSKT---WCIVEGLVEAIWALG
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