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Lag0041503 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041503
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr13:19213422..19213760
RNA-Seq ExpressionLag0041503
SyntenyLag0041503
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023880912.1 uncharacterized protein LOC111993298 [Quercus suber]3.5e-2866Show/hide
Query:  MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIG-IAGFSMNPSAPKISHLFFADDSLIFLKAT
        M +LGF + W+ L+ ECISTVS+SIL+NGE KG+  PSRGLRQGDPLSPY FLLCSEGL+ ML  A S   I GFS+    PKISHLFFADDSL+F +A+
Subjt:  MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIG-IAGFSMNPSAPKISHLFFADDSLIFLKAT
XP_023915763.1 uncharacterized protein LOC112027315 [Quercus suber]2.3e-2761Show/hide
Query:  KLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIG-IAGFSMNPSAPKISHLFFADDSLIFLKATTE
        K+GF + W+ LI EC++TVS+SIL+NGE KG   PSRGLRQGDPLSPY FL C+EGL+A+L  A + G I GFS+  + PK++HLFFADD LIF ++T E
Subjt:  KLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIG-IAGFSMNPSAPKISHLFFADDSLIFLKATTE
XP_023920731.1 uncharacterized protein LOC112032201 [Quercus suber]2.3e-2754.05Show/hide
Query:  MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIGI-AGFSMNPSAPKISHLFFADDSLIFLKAT
        M K+GF+D W++L+ +CI+TV++S+ ING+ +G+  PSRGLRQGDP+SP+ FL C+EGLSA+L  A S GI  G S  P  P+ISHLFFADDS+IF +AT
Subjt:  MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIGI-AGFSMNPSAPKISHLFFADDSLIFLKAT

Query:  TEAFGFFKGIM
         E     + ++
Subjt:  TEAFGFFKGIM
XP_030930993.1 uncharacterized protein LOC115956857 [Quercus lobata]3.9e-2757.66Show/hide
Query:  MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARS-IGIAGFSMNPSAPKISHLFFADDSLIFLKAT
        M +LGF + W+ L+ ECIS+VS+SIL+NGE++G+  PSRGLRQ DPLSPY FLLCS+GL+ ML  A +  GI GFS+    PKISHLFFADDSL+F +A+
Subjt:  MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARS-IGIAGFSMNPSAPKISHLFFADDSLIFLKAT

Query:  TEAFGFFKGIM
         E     + I+
Subjt:  TEAFGFFKGIM
XP_030940187.1 uncharacterized protein LOC115965136 [Quercus lobata]3.9e-2764.71Show/hide
Query:  MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIG-IAGFSMNPSAPKISHLFFADDSLIFLKAT
        M KLGF   WI L+  CISTVS+S+LINGEAKG   PSRGLRQGDP+SPY FLLC+EGL A L      G I G S+   AP+ISHLFFADDS+IF +AT
Subjt:  MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIG-IAGFSMNPSAPKISHLFFADDSLIFLKAT

Query:  TE
         E
Subjt:  TE
TrEMBL top hitse value%identityAlignment
A0A2N9F5W1 Reverse transcriptase domain-containing protein9.9e-2959.8Show/hide
Query:  MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHAR-SIGIAGFSMNPSAPKISHLFFADDSLIFLKAT
        M K+GFS+ W+ +I EC+ TVS+S+LINGE KG FCP+RGLRQGDP+SPY FLLC+EGL+A+L  A  S  I G S++   PK+SHLFFADDS++F +A+
Subjt:  MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHAR-SIGIAGFSMNPSAPKISHLFFADDSLIFLKAT

Query:  TE
         +
Subjt:  TE
A0A2N9FKE9 Protein kinase domain-containing protein2.2e-2859.46Show/hide
Query:  MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIG-IAGFSMNPSAPKISHLFFADDSLIFLKAT
        M ++GF   WI+L+ ECIS+VS+S+LINGE  GN  PSRGLRQGDPLSPY FLLC+EGL +++  A S G I G S+    PKI+HLFFADDSL+F+KAT
Subjt:  MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIG-IAGFSMNPSAPKISHLFFADDSLIFLKAT

Query:  TEAFGFFKGIM
        T A    + I+
Subjt:  TEAFGFFKGIM
A0A2N9G3I8 Reverse transcriptase domain-containing protein3.8e-2865.05Show/hide
Query:  MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIG-IAGFSMNPSAPKISHLFFADDSLIFLKAT
        M K+GF   WI L+ ECIS+VS+SILINGE  GN  PSRGLRQGDPLSPY FLLC+EG  ++L  A S G I G S+    PKI+HLFFADDSL+F KAT
Subjt:  MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIG-IAGFSMNPSAPKISHLFFADDSLIFLKAT

Query:  TEA
        T A
Subjt:  TEA
A0A2N9HR00 Uncharacterized protein3.8e-2865.05Show/hide
Query:  MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIG-IAGFSMNPSAPKISHLFFADDSLIFLKAT
        M K+GF   WI L+ ECISTVS+SILINGE  GN  PSRGLRQGDPLSPY FLLC+EGL +++  A S G I G S+    PKI+HLFFADDSL+F  AT
Subjt:  MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIG-IAGFSMNPSAPKISHLFFADDSLIFLKAT

Query:  TEA
        T A
Subjt:  TEA
A0A2N9J7Z2 Reverse transcriptase domain-containing protein2.9e-2865.05Show/hide
Query:  MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIG-IAGFSMNPSAPKISHLFFADDSLIFLKAT
        M K+GF   WI L+ ECISTVS+SILINGE  GN  PSRGLRQGDPLSPY FLLC+EGL +++  A S G I G S+    PKI+HLFFADDSL+F KAT
Subjt:  MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIG-IAGFSMNPSAPKISHLFFADDSLIFLKAT

Query:  TEA
          A
Subjt:  TEA
SwissProt top hitse value%identityAlignment
P92555 Uncharacterized mitochondrial protein AtMg012505.6e-1351.47Show/hide
Query:  LINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIG-IAGFSMNPSAPKISHLFFADDS
        +ING  +G   PSRGLRQGDPLSPY F+LC+E LS +   A+  G + G  ++ ++P+I+HL FADD+
Subjt:  LINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIG-IAGFSMNPSAPKISHLFFADDS
Q05118 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment)6.7e-0635.11Show/hide
Query:  MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIGIAGFSMNPSAPKISHLFFADDSLI
        M   G  DG  D I   I+    +I++ G          G++QGDPLSP  F +  + L   L   +     G SM P A KI+ L FADD L+
Subjt:  MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIGIAGFSMNPSAPKISHLFFADDSLI
Arabidopsis top hitse value%identityAlignment
ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)4.0e-1451.47Show/hide
Query:  LINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIG-IAGFSMNPSAPKISHLFFADDS
        +ING  +G   PSRGLRQGDPLSPY F+LC+E LS +   A+  G + G  ++ ++P+I+HL FADD+
Subjt:  LINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIG-IAGFSMNPSAPKISHLFFADDS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAAACTGGGTTTCTCTGATGGGTGGATTGATCTGATCAAGGAGTGTATATCCACGGTTTCTTTCTCTATCCTTATTAATGGGGAGGCGAAAGGTAATTTTTGTCC
TTCGAGGGGCTTGCGTCAGGGCGACCCATTATCGCCATATTTCTTTTTGTTATGTTCGGAGGGTTTGTCTGCTATGCTTGGTCATGCAAGGAGCATTGGTATTGCAGGCT
TTTCTATGAACCCATCTGCACCGAAAATATCTCATTTATTCTTCGCTGATGATAGCCTTATCTTCCTGAAGGCTACGACGGAGGCCTTTGGTTTTTTTAAAGGCATTATG
GTGGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAAACTGGGTTTCTCTGATGGGTGGATTGATCTGATCAAGGAGTGTATATCCACGGTTTCTTTCTCTATCCTTATTAATGGGGAGGCGAAAGGTAATTTTTGTCC
TTCGAGGGGCTTGCGTCAGGGCGACCCATTATCGCCATATTTCTTTTTGTTATGTTCGGAGGGTTTGTCTGCTATGCTTGGTCATGCAAGGAGCATTGGTATTGCAGGCT
TTTCTATGAACCCATCTGCACCGAAAATATCTCATTTATTCTTCGCTGATGATAGCCTTATCTTCCTGAAGGCTACGACGGAGGCCTTTGGTTTTTTTAAAGGCATTATG
GTGGATTAG
Protein sequenceShow/hide protein sequence
MGKLGFSDGWIDLIKECISTVSFSILINGEAKGNFCPSRGLRQGDPLSPYFFLLCSEGLSAMLGHARSIGIAGFSMNPSAPKISHLFFADDSLIFLKATTEAFGFFKGIM
VD