; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041508 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041508
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein BPS1, chloroplastic-like
Genome locationchr13:19260121..19265052
RNA-Seq ExpressionLag0041508
SyntenyLag0041508
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575710.1 UPF0496 protein 4, partial [Cucurbita argyrosperma subsp. sororia]8.1e-2062.89Show/hide
Query:  MVLLFHSFNKLCSKLDNHHNRHACKASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQL-----------AKLVVDLEYPVGKCGADLVDG
        M+LL  +FNKLCSKL + H RH CKAS SVS LQ  E +VSSCLNQ LLSS DL+LLSF WL QL           AKLV +LE+PVGK GA LVDG
Subjt:  MVLLFHSFNKLCSKLDNHHNRHACKASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQL-----------AKLVVDLEYPVGKCGADLVDG

KAG6593278.1 Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.0e-1963.27Show/hide
Query:  MVLLFHSFNKLCSKLDN-HHNRHACKASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQL-----------AKLVVDLEYPVGKCGADLVDG
        M+LL  SFNK CSK  N HH+RH  +ASFSVS LQ F+ EVSSCLNQLLLSS D   LSF WL+QL           AKLVVDL+ PV K GADLVDG
Subjt:  MVLLFHSFNKLCSKLDN-HHNRHACKASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQL-----------AKLVVDLEYPVGKCGADLVDG

KAG7025628.1 Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-1963.27Show/hide
Query:  MVLLFHSFNKLCSKLDN-HHNRHACKASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQL-----------AKLVVDLEYPVGKCGADLVDG
        M+LL  SFNK CSK  N HH+RH  +ASFSVS LQ F+ EVSSCLNQLLLSS D + LSF WL+QL           AKLVVDL+ PV K GADLVDG
Subjt:  MVLLFHSFNKLCSKLDN-HHNRHACKASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQL-----------AKLVVDLEYPVGKCGADLVDG

XP_022960422.1 protein BPS1, chloroplastic-like [Cucurbita moschata]4.0e-1963.27Show/hide
Query:  MVLLFHSFNKLCSKLDN-HHNRHACKASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQL-----------AKLVVDLEYPVGKCGADLVDG
        M+LL  SFNK CSK  N HH+RH  +ASFSVS LQ F+ EVSSCLNQLLLSS D   LSF WL+QL           AKLVVDL+ PV K GADLVDG
Subjt:  MVLLFHSFNKLCSKLDN-HHNRHACKASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQL-----------AKLVVDLEYPVGKCGADLVDG

XP_038896303.1 protein BPS1, chloroplastic-like [Benincasa hispida]3.4e-2670.41Show/hide
Query:  MVLLFHSFNKLCSKLDNHHNRHACKASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQL------------AKLVVDLEYPVGKCGADLVDG
        M LL  +FNKLCSKLDNHH+R  CK+SFSVSRLQ FE +VSSCLNQLLLS+ DLK LSF+WL+QL            AKLVVDLEYPVGK GADLVDG
Subjt:  MVLLFHSFNKLCSKLDNHHNRHACKASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQL------------AKLVVDLEYPVGKCGADLVDG

TrEMBL top hitse value%identityAlignment
A0A0A0K882 Uncharacterized protein3.4e-1658Show/hide
Query:  MVLLFHSFNKLCSKLDNHH-NRHACK-ASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQL------------AKLVVDLEYPVGKCGADLVDG
        M L+  +FNK CSKLDN H NRH  K ASFS+SRL  FE +VSSC N LLLS+   K LSF + +QL            AKLVVDLEYPVG+  ADLVDG
Subjt:  MVLLFHSFNKLCSKLDNHH-NRHACK-ASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQL------------AKLVVDLEYPVGKCGADLVDG

A0A1S4E356 UPF0496 protein 4-like5.3e-1760Show/hide
Query:  MVLLFHSFNKLCSKLDNHH-NRHACK-ASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQL------------AKLVVDLEYPVGKCGADLVDG
        M LL  +FNK CSKLDN H NRH  K ASFS+SRL  FE +VS+CLN LLLS+   K LSF +L+QL            AKLVVDLEYPVG+  ADLVDG
Subjt:  MVLLFHSFNKLCSKLDNHH-NRHACK-ASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQL------------AKLVVDLEYPVGKCGADLVDG

A0A5D3CEU0 UPF0496 protein 4-like5.3e-1760Show/hide
Query:  MVLLFHSFNKLCSKLDNHH-NRHACK-ASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQL------------AKLVVDLEYPVGKCGADLVDG
        M LL  +FNK CSKLDN H NRH  K ASFS+SRL  FE +VS+CLN LLLS+   K LSF +L+QL            AKLVVDLEYPVG+  ADLVDG
Subjt:  MVLLFHSFNKLCSKLDNHH-NRHACK-ASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQL------------AKLVVDLEYPVGKCGADLVDG

A0A6J1H7D5 protein BPS1, chloroplastic-like2.0e-1963.27Show/hide
Query:  MVLLFHSFNKLCSKLDN-HHNRHACKASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQL-----------AKLVVDLEYPVGKCGADLVDG
        M+LL  SFNK CSK  N HH+RH  +ASFSVS LQ F+ EVSSCLNQLLLSS D   LSF WL+QL           AKLVVDL+ PV K GADLVDG
Subjt:  MVLLFHSFNKLCSKLDN-HHNRHACKASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQL-----------AKLVVDLEYPVGKCGADLVDG

A0A6J1KTC2 protein BPS1, chloroplastic-like3.7e-1860.2Show/hide
Query:  MVLLFHSFNKLCSKLDN-HHNRHACKASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQL-----------AKLVVDLEYPVGKCGADLVDG
        M+LL  +FNK CSK  N HH+RH  +ASFSVS LQ F+ EVSSCLNQLLL S D   LSF WL+QL           +KLVVDL+ PV K GADLVDG
Subjt:  MVLLFHSFNKLCSKLDN-HHNRHACKASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQL-----------AKLVVDLEYPVGKCGADLVDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCTTTTGTTTCATTCCTTCAACAAGCTCTGTTCCAAGCTCGACAATCACCACAACCGCCATGCATGTAAAGCTTCGTTCTCTGTTTCTCGTCTTCAGGTCTTCGA
GGTCGAAGTCTCGTCTTGCTTGAATCAACTCTTGTTGTCGAGTTTCGATTTGAAATTGTTGTCGTTTCAATGGCTTATTCAGCTTGCGAAATTGGTTGTTGATCTGGAGT
ACCCCGTCGGGAAATGCGGAGCCGATTTGGTTGATGGATCAGATCTGGGCGGTGGCGCCAGTGCAATTGCGATAGATCTGGGTAAAATTACATGGAGATGTATAGTTGCG
GTGAATCGTGGTAAAACGGCGGAGAGAAAAACTACCGAGAAAGAGAGGGTTGTGCGAAGGGAGAGGCAACATGGCAGTTTTCGTTTGCAGTGGCTGGGCGACGACGCAAC
TGGCGGTAAAGGCGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCTTTTGTTTCATTCCTTCAACAAGCTCTGTTCCAAGCTCGACAATCACCACAACCGCCATGCATGTAAAGCTTCGTTCTCTGTTTCTCGTCTTCAGGTCTTCGA
GGTCGAAGTCTCGTCTTGCTTGAATCAACTCTTGTTGTCGAGTTTCGATTTGAAATTGTTGTCGTTTCAATGGCTTATTCAGCTTGCGAAATTGGTTGTTGATCTGGAGT
ACCCCGTCGGGAAATGCGGAGCCGATTTGGTTGATGGATCAGATCTGGGCGGTGGCGCCAGTGCAATTGCGATAGATCTGGGTAAAATTACATGGAGATGTATAGTTGCG
GTGAATCGTGGTAAAACGGCGGAGAGAAAAACTACCGAGAAAGAGAGGGTTGTGCGAAGGGAGAGGCAACATGGCAGTTTTCGTTTGCAGTGGCTGGGCGACGACGCAAC
TGGCGGTAAAGGCGAATGA
Protein sequenceShow/hide protein sequence
MVLLFHSFNKLCSKLDNHHNRHACKASFSVSRLQVFEVEVSSCLNQLLLSSFDLKLLSFQWLIQLAKLVVDLEYPVGKCGADLVDGSDLGGGASAIAIDLGKITWRCIVA
VNRGKTAERKTTEKERVVRRERQHGSFRLQWLGDDATGGKGE