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Lag0041511 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041511
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationchr13:19296670..19297002
RNA-Seq ExpressionLag0041511
SyntenyLag0041511
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038601.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]1.4e-0542.05Show/hide
Query:  VEQVLRQFFHAYSSSSFGSGGSGSGNVSVITKEKGRVSQPMDVDDESETYGFAHLFSTVETSTFDRESEIDVYLLETLAKDDSSFDIL
        VE VLR+ FH Y+          S +  +    K  V   +D+D     YG  + F  VET+T D+ESEIDVYLL++L   DS+FDIL
Subjt:  VEQVLRQFFHAYSSSSFGSGGSGSGNVSVITKEKGRVSQPMDVDDESETYGFAHLFSTVETSTFDRESEIDVYLLETLAKDDSSFDIL

XP_016903504.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo]3.1e-0538.39Show/hide
Query:  VEQVLRQFFHAYSSSSFGSGGSGSGNVSVITKEKGRVS-------------------QPMDVDDESET-----YGFAHLFSTVETSTFDRESEIDVYLLE
        VE VLR+ FH Y+     SG   S + S  T      S                      DV D+ ET     YG  + F  VET+T D+ESEIDVYLL+
Subjt:  VEQVLRQFFHAYSSSSFGSGGSGSGNVSVITKEKGRVS-------------------QPMDVDDESET-----YGFAHLFSTVETSTFDRESEIDVYLLE

Query:  TLAKDDSSFDIL
        +L   DS+FDIL
Subjt:  TLAKDDSSFDIL

XP_031739490.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis sativus]8.2e-0643.24Show/hide
Query:  VEQVLRQFFHAYS---SSSFGSGGSGSGNVSVITKEKG-------------RVSQPMDVD--DESET-----YGFAHLFSTVETSTFDRESEIDVYLLET
        VE  LR+ FH Y+   SSS  +  S S + SV                    +   MDVD  DE ET     YG  + F  VET+T D+ESEIDVYLLE+
Subjt:  VEQVLRQFFHAYS---SSSFGSGGSGSGNVSVITKEKG-------------RVSQPMDVD--DESET-----YGFAHLFSTVETSTFDRESEIDVYLLET

Query:  LAKDDSSFDIL
        LA  DS FDIL
Subjt:  LAKDDSSFDIL

XP_038888298.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Benincasa hispida]5.3e-0538.52Show/hide
Query:  VEQVLRQFFHAY-----SSSSFGSGGSGSGNVSVITKEKGR------------------------VSQPMDVDDESET-----YGFAHLFSTVETSTFDR
        VE VLR+ FH Y     S SS  S  S S +VSV                               V   +DV++E E      YG  + F   ET+TFD+
Subjt:  VEQVLRQFFHAY-----SSSSFGSGGSGSGNVSVITKEKGR------------------------VSQPMDVDDESET-----YGFAHLFSTVETSTFDR

Query:  ESEIDVYLLETLAKDDSSFDIL
        ESEIDVYLLE+L   DS+FDIL
Subjt:  ESEIDVYLLETLAKDDSSFDIL

XP_038888299.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Benincasa hispida]5.3e-0538.52Show/hide
Query:  VEQVLRQFFHAY-----SSSSFGSGGSGSGNVSVITKEKGR------------------------VSQPMDVDDESET-----YGFAHLFSTVETSTFDR
        VE VLR+ FH Y     S SS  S  S S +VSV                               V   +DV++E E      YG  + F   ET+TFD+
Subjt:  VEQVLRQFFHAY-----SSSSFGSGGSGSGNVSVITKEKGR------------------------VSQPMDVDDESET-----YGFAHLFSTVETSTFDR

Query:  ESEIDVYLLETLAKDDSSFDIL
        ESEIDVYLLE+L   DS+FDIL
Subjt:  ESEIDVYLLETLAKDDSSFDIL

TrEMBL top hitse value%identityAlignment
A0A1S4E5K1 zinc finger BED domain-containing protein RICESLEEPER 2-like1.5e-0538.39Show/hide
Query:  VEQVLRQFFHAYSSSSFGSGGSGSGNVSVITKEKGRVS-------------------QPMDVDDESET-----YGFAHLFSTVETSTFDRESEIDVYLLE
        VE VLR+ FH Y+     SG   S + S  T      S                      DV D+ ET     YG  + F  VET+T D+ESEIDVYLL+
Subjt:  VEQVLRQFFHAYSSSSFGSGGSGSGNVSVITKEKGRVS-------------------QPMDVDDESET-----YGFAHLFSTVETSTFDRESEIDVYLLE

Query:  TLAKDDSSFDIL
        +L   DS+FDIL
Subjt:  TLAKDDSSFDIL

A0A5D3E6G3 Zinc finger BED domain-containing protein RICESLEEPER 3-like6.8e-0642.05Show/hide
Query:  VEQVLRQFFHAYSSSSFGSGGSGSGNVSVITKEKGRVSQPMDVDDESETYGFAHLFSTVETSTFDRESEIDVYLLETLAKDDSSFDIL
        VE VLR+ FH Y+          S +  +    K  V   +D+D     YG  + F  VET+T D+ESEIDVYLL++L   DS+FDIL
Subjt:  VEQVLRQFFHAYSSSSFGSGGSGSGNVSVITKEKGRVSQPMDVDDESETYGFAHLFSTVETSTFDRESEIDVYLLETLAKDDSSFDIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGATAAGGTAGAGCAGGTTTTGAGACAATTCTTCCATGCATATAGTTCATCTTCTTTTGGTAGTGGTGGTAGTGGCAGTGGCAATGTAAGTGTCATTACTAAAGA
AAAGGGTAGGGTTTCTCAACCAATGGATGTTGATGATGAGAGTGAGACCTATGGATTTGCACATTTGTTTTCAACTGTTGAGACTAGTACCTTCGATAGAGAGTCAGAAA
TTGATGTGTATTTATTAGAAACTCTTGCTAAGGATGATAGTAGTTTTGACATTCTTAGTGATGGATTGGAATTCCCAATTCCGTTACAGCGGAAGCAATTGGACCGTTCG
TAA
mRNA sequenceShow/hide mRNA sequence
ATGACAGATAAGGTAGAGCAGGTTTTGAGACAATTCTTCCATGCATATAGTTCATCTTCTTTTGGTAGTGGTGGTAGTGGCAGTGGCAATGTAAGTGTCATTACTAAAGA
AAAGGGTAGGGTTTCTCAACCAATGGATGTTGATGATGAGAGTGAGACCTATGGATTTGCACATTTGTTTTCAACTGTTGAGACTAGTACCTTCGATAGAGAGTCAGAAA
TTGATGTGTATTTATTAGAAACTCTTGCTAAGGATGATAGTAGTTTTGACATTCTTAGTGATGGATTGGAATTCCCAATTCCGTTACAGCGGAAGCAATTGGACCGTTCG
TAA
Protein sequenceShow/hide protein sequence
MTDKVEQVLRQFFHAYSSSSFGSGGSGSGNVSVITKEKGRVSQPMDVDDESETYGFAHLFSTVETSTFDRESEIDVYLLETLAKDDSSFDILSDGLEFPIPLQRKQLDRS