; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041516 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041516
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr13:19427303..19432907
RNA-Seq ExpressionLag0041516
SyntenyLag0041516
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022929949.1 uncharacterized protein LOC111436411 [Cucurbita moschata]3.7e-2766.06Show/hide
Query:  FLLPVLLQHR-ICSFQSLSNIICTNAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTVTLQLTDRSITYREGK
        FL  VL+  R    F+ +S     +AI KN +  K KDPGSFTI VSIGGKELGRALCDLGA+I LMPLS+Y+K+GI EARPTTVTLQL DRSITY EGK
Subjt:  FLLPVLLQHR-ICSFQSLSNIICTNAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTVTLQLTDRSITYREGK

Query:  IKDVLVQVN
        I+D+L+QV+
Subjt:  IKDVLVQVN

XP_022951570.1 uncharacterized protein LOC111454344 [Cucurbita moschata]9.9e-2877.65Show/hide
Query:  NAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTVTLQLTDRSITYREGKIKDVLVQVN
        +AI KN +  K KDPGSFTI VSIGGKELGRALCDLGASI LMPLS+Y+K+GI EARPTTVTLQL DRSITY EGKI+D+L+QV+
Subjt:  NAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTVTLQLTDRSITYREGKIKDVLVQVN

XP_022973352.1 uncharacterized protein LOC111471913 [Cucurbita maxima]7.6e-2877.65Show/hide
Query:  NAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTVTLQLTDRSITYREGKIKDVLVQVN
        +AI KN +  K KDPGSFTILVSIGGKELGRALCDLGASI LMPLS+Y+K+GI EARPTTVTLQL DR ITY EGKI+D+L+QV+
Subjt:  NAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTVTLQLTDRSITYREGKIKDVLVQVN

XP_023521407.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785222 [Cucurbita pepo subsp. pepo]2.4e-2672.94Show/hide
Query:  NAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTVTLQLTDRSITYREGKIKDVLVQVN
        +AI KN +  K KDPGSFTI +SIGGK+LGRALCDLG+SI LMPLS+Y+K+GI EARPTTVTLQL DRS TY EGKI+D+L+QV+
Subjt:  NAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTVTLQLTDRSITYREGKIKDVLVQVN

XP_023521781.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785639, partial [Cucurbita pepo subsp. pepo]2.4e-2672.94Show/hide
Query:  NAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTVTLQLTDRSITYREGKIKDVLVQVN
        +AI KN +  K KDPGSFTI +SIGGK+LGRALCDLG+SI LMPLS+Y+K+GI EARPTTVTLQL DRS TY EGKI+D+L+QV+
Subjt:  NAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTVTLQLTDRSITYREGKIKDVLVQVN

TrEMBL top hitse value%identityAlignment
A0A6J1EQ90 uncharacterized protein LOC1114364111.8e-2766.06Show/hide
Query:  FLLPVLLQHR-ICSFQSLSNIICTNAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTVTLQLTDRSITYREGK
        FL  VL+  R    F+ +S     +AI KN +  K KDPGSFTI VSIGGKELGRALCDLGA+I LMPLS+Y+K+GI EARPTTVTLQL DRSITY EGK
Subjt:  FLLPVLLQHR-ICSFQSLSNIICTNAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTVTLQLTDRSITYREGK

Query:  IKDVLVQVN
        I+D+L+QV+
Subjt:  IKDVLVQVN

A0A6J1EXR9 uncharacterized protein LOC1114392522.0e-2675.29Show/hide
Query:  NAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTVTLQLTDRSITYREGKIKDVLVQVN
        NAI KN +  K KDPGS TI VSIGGKELGRALCDL ASI LMPLS+Y+K+GI EARPT VT QL DRSITY EGKI+D+L+QVN
Subjt:  NAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTVTLQLTDRSITYREGKIKDVLVQVN

A0A6J1GJ68 uncharacterized protein LOC1114543444.8e-2877.65Show/hide
Query:  NAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTVTLQLTDRSITYREGKIKDVLVQVN
        +AI KN +  K KDPGSFTI VSIGGKELGRALCDLGASI LMPLS+Y+K+GI EARPTTVTLQL DRSITY EGKI+D+L+QV+
Subjt:  NAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTVTLQLTDRSITYREGKIKDVLVQVN

A0A6J1H7K8 uncharacterized protein LOC1114611674.5e-2671.76Show/hide
Query:  NAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTVTLQLTDRSITYREGKIKDVLVQVN
        +AI KN +  K KDPGSFTI +SIGGK+LGRALCDLG+SI LMPLS+Y+K+GI EARPTTVTLQL DRS T+ EGKI+D+L+QV+
Subjt:  NAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTVTLQLTDRSITYREGKIKDVLVQVN

A0A6J1I7A7 uncharacterized protein LOC1114719133.7e-2877.65Show/hide
Query:  NAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTVTLQLTDRSITYREGKIKDVLVQVN
        +AI KN +  K KDPGSFTILVSIGGKELGRALCDLGASI LMPLS+Y+K+GI EARPTTVTLQL DR ITY EGKI+D+L+QV+
Subjt:  NAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTVTLQLTDRSITYREGKIKDVLVQVN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTGCGACCGATCAGGCACTAGGCAACTGGCTATCCCTAGCTCAGTCACTGGCGTTCACCAATACACAATGATCTTTCTGCTTCCAGTTTTGCTGCAGCATAGAAT
TTGCTCCTTCCAGTCCCTCAGCAACATAATCTGCACAAATGCCATTTTTAAGAATGGACTATCTACCAAGGCTAAGGATCCGGGGTCATTCACTATTCTTGTCTCTATAG
GTGGAAAGGAGTTGGGGAGAGCACTTTGTGATTTAGGTGCAAGCATATACCTTATGCCTCTTTCGGTCTATCAGAAGGTAGGTATTGATGAAGCTAGGCCTACCACAGTT
ACGCTCCAATTAACTGATAGGTCTATCACATATCGTGAGGGAAAGATTAAGGATGTTTTGGTCCAGGTAAATGGCTGGAGGCACGCGAATGGAGGCAGCGTCGAGACGCT
ACCTCCACAGCGTCTCGACGCTGCAAGCCTTCCGAAAATAATTAAAGCGTACATTGACACAGCGTCGAGACGCTATGTCGACAGGTCTCGACGCTGTCACGCAGAATACA
GTATATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTGCGACCGATCAGGCACTAGGCAACTGGCTATCCCTAGCTCAGTCACTGGCGTTCACCAATACACAATGATCTTTCTGCTTCCAGTTTTGCTGCAGCATAGAAT
TTGCTCCTTCCAGTCCCTCAGCAACATAATCTGCACAAATGCCATTTTTAAGAATGGACTATCTACCAAGGCTAAGGATCCGGGGTCATTCACTATTCTTGTCTCTATAG
GTGGAAAGGAGTTGGGGAGAGCACTTTGTGATTTAGGTGCAAGCATATACCTTATGCCTCTTTCGGTCTATCAGAAGGTAGGTATTGATGAAGCTAGGCCTACCACAGTT
ACGCTCCAATTAACTGATAGGTCTATCACATATCGTGAGGGAAAGATTAAGGATGTTTTGGTCCAGGTAAATGGCTGGAGGCACGCGAATGGAGGCAGCGTCGAGACGCT
ACCTCCACAGCGTCTCGACGCTGCAAGCCTTCCGAAAATAATTAAAGCGTACATTGACACAGCGTCGAGACGCTATGTCGACAGGTCTCGACGCTGTCACGCAGAATACA
GTATATAA
Protein sequenceShow/hide protein sequence
MKCDRSGTRQLAIPSSVTGVHQYTMIFLLPVLLQHRICSFQSLSNIICTNAIFKNGLSTKAKDPGSFTILVSIGGKELGRALCDLGASIYLMPLSVYQKVGIDEARPTTV
TLQLTDRSITYREGKIKDVLVQVNGWRHANGGSVETLPPQRLDAASLPKIIKAYIDTASRRYVDRSRRCHAEYSI