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Lag0041529 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041529
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr13:19622178..19622510
RNA-Seq ExpressionLag0041529
SyntenyLag0041529
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0050789 - regulation of biological process (biological process)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsIPR004808 - AP endonuclease 1
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN65957.1 hypothetical protein VITISV_035610 [Vitis vinifera]4.4e-1541.18Show/hide
Query:  MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSLPSLTDFSLQIVLS
        +GS KKR ++KD L S+ P +V+IQETK +  +R+ V S+W++RN  W  + A GASGGI+++W+    + +E+V G FS+S+  ++     F L  V  
Subjt:  MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSLPSLTDFSLQIVLS

Query:  PN
        PN
Subjt:  PN

RVW75035.1 hypothetical protein CK203_053703 [Vitis vinifera]3.3e-1544.12Show/hide
Query:  MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSLPSLTDFSLQIVLS
        +GS KKR ++KD LSS+ P +V+IQETK    +R++V S+WS+RN  W ++ A GASGGI+I+W+      +E+V G FS+SI  ++       L  V  
Subjt:  MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSLPSLTDFSLQIVLS

Query:  PN
        PN
Subjt:  PN

RVX04736.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]4.4e-1541.18Show/hide
Query:  MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSLPSLTDFSLQIVLS
        +GS KKR ++KD L S+ P +V+IQETK +  +R+ V S+W++RN  W  + A GASGGI+++W+    + +E+V G FS+S+  ++     F L  V  
Subjt:  MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSLPSLTDFSLQIVLS

Query:  PN
        PN
Subjt:  PN

XP_022145142.1 uncharacterized protein LOC111014657 [Momordica charantia]4.7e-1749.5Show/hide
Query:  MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSLPSLTDFSLQIVLS
        +GS  KRA IKD ++S  P +VI+ ETK S IN K +KS+WSS +IAW S+DA GASGGI++LW++ S    E++ G FS+S+H  L     + L  V S
Subjt:  MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSLPSLTDFSLQIVLS

Query:  P
        P
Subjt:  P

XP_022158956.1 uncharacterized protein LOC111025405 [Momordica charantia]4.4e-1548.28Show/hide
Query:  MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSL
        + SWKK ALIK  +S  NP +VI+QETK+S ++  IVKS+WS+  I W+++DA G + GI+ILWN+      E+++G+FSL+I+  L
Subjt:  MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSL

TrEMBL top hitse value%identityAlignment
A0A438GS66 Uncharacterized protein1.6e-1544.12Show/hide
Query:  MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSLPSLTDFSLQIVLS
        +GS KKR ++KD LSS+ P +V+IQETK    +R++V S+WS+RN  W ++ A GASGGI+I+W+      +E+V G FS+SI  ++       L  V  
Subjt:  MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSLPSLTDFSLQIVLS

Query:  PN
        PN
Subjt:  PN

A0A438J749 Transposon TX1 uncharacterized 149 kDa protein2.1e-1541.18Show/hide
Query:  MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSLPSLTDFSLQIVLS
        +GS KKR ++KD L S+ P +V+IQETK +  +R+ V S+W++RN  W  + A GASGGI+++W+    + +E+V G FS+S+  ++     F L  V  
Subjt:  MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSLPSLTDFSLQIVLS

Query:  PN
        PN
Subjt:  PN

A0A6J1CVN2 uncharacterized protein LOC1110146572.3e-1749.5Show/hide
Query:  MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSLPSLTDFSLQIVLS
        +GS  KRA IKD ++S  P +VI+ ETK S IN K +KS+WSS +IAW S+DA GASGGI++LW++ S    E++ G FS+S+H  L     + L  V S
Subjt:  MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSLPSLTDFSLQIVLS

Query:  P
        P
Subjt:  P

A0A6J1E2G6 uncharacterized protein LOC1110254052.1e-1548.28Show/hide
Query:  MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSL
        + SWKK ALIK  +S  NP +VI+QETK+S ++  IVKS+WS+  I W+++DA G + GI+ILWN+      E+++G+FSL+I+  L
Subjt:  MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSL

A5BSZ3 Reverse transcriptase domain-containing protein2.1e-1541.18Show/hide
Query:  MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSLPSLTDFSLQIVLS
        +GS KKR ++KD L S+ P +V+IQETK +  +R+ V S+W++RN  W  + A GASGGI+++W+    + +E+V G FS+S+  ++     F L  V  
Subjt:  MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSLPSLTDFSLQIVLS

Query:  PN
        PN
Subjt:  PN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTCATGGAAAAAGAGAGCTCTAATCAAAGATCTCCTCTCCTCACAGAACCCCACTTTGGTTATTATCCAAGAAACCAAGATGTCCGGGATCAATAGGAAGATTGT
TAAATCTATCTGGAGCTCAAGGAACATAGCTTGGACTTCCATTGACGCTGTTGGTGCATCAGGAGGGATTGTGATCCTCTGGAATGAATCCTCTTTTGTCGTAAAGGAGA
TTGTCCAAGGTATTTTCTCTCTCTCCATTCATCTTTCCTTACCCTCATTGACAGATTTCTCATTACAGATAGTATTGTCTCCAAATTTCGAGCAGTCACAGCGCGAAGGC
TGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTCATGGAAAAAGAGAGCTCTAATCAAAGATCTCCTCTCCTCACAGAACCCCACTTTGGTTATTATCCAAGAAACCAAGATGTCCGGGATCAATAGGAAGATTGT
TAAATCTATCTGGAGCTCAAGGAACATAGCTTGGACTTCCATTGACGCTGTTGGTGCATCAGGAGGGATTGTGATCCTCTGGAATGAATCCTCTTTTGTCGTAAAGGAGA
TTGTCCAAGGTATTTTCTCTCTCTCCATTCATCTTTCCTTACCCTCATTGACAGATTTCTCATTACAGATAGTATTGTCTCCAAATTTCGAGCAGTCACAGCGCGAAGGC
TGA
Protein sequenceShow/hide protein sequence
MGSWKKRALIKDLLSSQNPTLVIIQETKMSGINRKIVKSIWSSRNIAWTSIDAVGASGGIVILWNESSFVVKEIVQGIFSLSIHLSLPSLTDFSLQIVLSPNFEQSQREG