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Lag0041536 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041536
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr13:19852701..19853072
RNA-Seq ExpressionLag0041536
SyntenyLag0041536
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OVA11710.1 hypothetical protein BVC80_8205g2 [Macleaya cordata]5.4e-0631.3Show/hide
Query:  AELRAILEGVKFAKSLCLPKIIVESNNKRVVDFIT-RKGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVSNVPDWLC
        AE  AIL  V++AK L L K+  ES+ K ++DFI   KGVI     +++++  +++P  E   F F +R  N  AD LA++AR+S   ++   + P ++ 
Subjt:  AELRAILEGVKFAKSLCLPKIIVESNNKRVVDFIT-RKGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVSNVPDWLC

Query:  ILVNSDRFAFARVAS
          + +D  +   + +
Subjt:  ILVNSDRFAFARVAS

OVA12775.1 Ribonuclease H domain [Macleaya cordata]5.4e-0634.34Show/hide
Query:  AELRAILEGVKFAKSLCLPKIIVESNNKRVVDFITRK-GVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVSNVPDWL
        AE  AILE +++AK L + ++  ES+ K ++DFI    GVI     + +++   L+P  E   F F +R  N  AD LA++AR+SK  ++   + P ++
Subjt:  AELRAILEGVKFAKSLCLPKIIVESNNKRVVDFITRK-GVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVSNVPDWL

OVA18165.1 Ribonuclease H domain [Macleaya cordata]5.4e-0631.3Show/hide
Query:  AELRAILEGVKFAKSLCLPKIIVESNNKRVVDFIT-RKGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVSNVPDWLC
        AE  AIL  V++AK L L K+  ES+ K ++DFI   KGVI     +++++  +++P  E   F F +R  N  AD LA++AR+S   ++   + P ++ 
Subjt:  AELRAILEGVKFAKSLCLPKIIVESNNKRVVDFIT-RKGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVSNVPDWLC

Query:  ILVNSDRFAFARVAS
          + +D  +   + +
Subjt:  ILVNSDRFAFARVAS

PQM35320.1 uncharacterized protein Pyn_06201 [Prunus yedoensis var. nudiflora]6.4e-0733.96Show/hide
Query:  VAELRAILEGVKFAKSLCLPKIIVESNNKRVVDFITRKGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVSNVPDWLC
        V EL AI EG++FA       ++VE+N K  ++ I      +     ++ +I  L  N + ++F FA R CNTVAD LA+ A  S     W+   P WL 
Subjt:  VAELRAILEGVKFAKSLCLPKIIVESNNKRVVDFITRKGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVSNVPDWLC

Query:  ILVNSD
        + + +D
Subjt:  ILVNSD

XP_021809818.1 uncharacterized protein LOC110753261 [Prunus avium]2.2e-0732.08Show/hide
Query:  AELRAILEGVKFAKSLCLPKIIVESNNKRVVDFITR-KGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVSNVPDWLC
        AE+ A+  G+ FA+       ++ES+++ VV+ + + +   W+    L+++I   + + EE+   F+ R+CN VA FLAR A       +W+  VP WL 
Subjt:  AELRAILEGVKFAKSLCLPKIIVESNNKRVVDFITR-KGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVSNVPDWLC

Query:  ILVNSD
         +VN D
Subjt:  ILVNSD

TrEMBL top hitse value%identityAlignment
A0A314UDF4 RNase H domain-containing protein3.1e-0733.96Show/hide
Query:  VAELRAILEGVKFAKSLCLPKIIVESNNKRVVDFITRKGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVSNVPDWLC
        V EL AI EG++FA       ++VE+N K  ++ I      +     ++ +I  L  N + ++F FA R CNTVAD LA+ A  S     W+   P WL 
Subjt:  VAELRAILEGVKFAKSLCLPKIIVESNNKRVVDFITRKGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVSNVPDWLC

Query:  ILVNSD
        + + +D
Subjt:  ILVNSD

A0A453DDS3 RNase H domain-containing protein4.5e-0628.32Show/hide
Query:  DFNLGGHVAELRAILEGVKFAKSLCLPKIIVESNNKRVVDFITRKGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVS
        D  L     E  AI +GV+ A+++ + K+IVE+N + V +    +    SE+ + + EI  L  N EE    F  R+ N +A   A+    S+    W++
Subjt:  DFNLGGHVAELRAILEGVKFAKSLCLPKIIVESNNKRVVDFITRKGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVS

Query:  NVPDWLCILVNSD
         +P +L   V  +
Subjt:  NVPDWLCILVNSD

A0A6P5RZ31 uncharacterized protein LOC1107515794.5e-0631.13Show/hide
Query:  VAELRAILEGVKFAKSLCLPKIIVESNNKRVVDFITRKGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVSNVPDWLC
        V EL AI EG++F        ++VE++ K  ++ I      +     ++ +I  L  N + ++F F+ R CNTVAD LA+ A  S     W+   P WL 
Subjt:  VAELRAILEGVKFAKSLCLPKIIVESNNKRVVDFITRKGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVSNVPDWLC

Query:  ILVNSD
        + + +D
Subjt:  ILVNSD

A0A6P5S7Q3 uncharacterized protein LOC1107532611.1e-0732.08Show/hide
Query:  AELRAILEGVKFAKSLCLPKIIVESNNKRVVDFITR-KGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVSNVPDWLC
        AE+ A+  G+ FA+       ++ES+++ VV+ + + +   W+    L+++I   + + EE+   F+ R+CN VA FLAR A       +W+  VP WL 
Subjt:  AELRAILEGVKFAKSLCLPKIIVESNNKRVVDFITR-KGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVSNVPDWLC

Query:  ILVNSD
         +VN D
Subjt:  ILVNSD

A0A7J9M153 RNase H domain-containing protein5.8e-0634.38Show/hide
Query:  VAELRAILEGVKFAKSLCLPKIIVESNNKRVVDFITRKGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVSNVP
        VAE RA    + FA+S+C  ++IVE ++  V+  I +KG   S + S+   I+NL  + E +++    R+ N  A  LA   +  K   SWV  VP
Subjt:  VAELRAILEGVKFAKSLCLPKIIVESNNKRVVDFITRKGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVSNVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.7e-0532.32Show/hide
Query:  AELRAILEGVKFAKSLCLPKIIVESNNKRVVDFITRKGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLAR-SARVSKESASWVSNVPDWL
        AEL A+   V         +II ES+ + +V+ +      W  ++  +E+I  L+ + EE+ F F  R  N VAD +AR S   S       S VP WL
Subjt:  AELRAILEGVKFAKSLCLPKIIVESNNKRVVDFITRKGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLAR-SARVSKESASWVSNVPDWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTCAATCTGGGGGGTCATGTGGCTGAGCTAAGGGCTATACTGGAGGGTGTTAAATTTGCTAAATCTTTATGTTTGCCCAAGATCATTGTGGAATCTAACAACAA
GAGAGTAGTAGACTTTATTACAAGGAAAGGTGTCATCTGGAGTGAAGTGGAGAGTTTGGTAGAGGAAATTTGGAATCTCGTGCCAAATTGTGAGGAAATTAATTTTTTCT
TTGCTAATAGGAAATGTAATACAGTGGCTGATTTTTTAGCCAGAAGTGCTAGAGTTTCGAAAGAGAGTGCTAGCTGGGTGAGTAATGTCCCAGATTGGCTTTGTATCTTG
GTCAATTCTGACCGTTTTGCTTTTGCCCGAGTGGCGTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTCAATCTGGGGGGTCATGTGGCTGAGCTAAGGGCTATACTGGAGGGTGTTAAATTTGCTAAATCTTTATGTTTGCCCAAGATCATTGTGGAATCTAACAACAA
GAGAGTAGTAGACTTTATTACAAGGAAAGGTGTCATCTGGAGTGAAGTGGAGAGTTTGGTAGAGGAAATTTGGAATCTCGTGCCAAATTGTGAGGAAATTAATTTTTTCT
TTGCTAATAGGAAATGTAATACAGTGGCTGATTTTTTAGCCAGAAGTGCTAGAGTTTCGAAAGAGAGTGCTAGCTGGGTGAGTAATGTCCCAGATTGGCTTTGTATCTTG
GTCAATTCTGACCGTTTTGCTTTTGCCCGAGTGGCGTCTTAA
Protein sequenceShow/hide protein sequence
MDFNLGGHVAELRAILEGVKFAKSLCLPKIIVESNNKRVVDFITRKGVIWSEVESLVEEIWNLVPNCEEINFFFANRKCNTVADFLARSARVSKESASWVSNVPDWLCIL
VNSDRFAFARVAS