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Lag0041548 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041548
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr13:20104207..20104584
RNA-Seq ExpressionLag0041548
SyntenyLag0041548
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]1.3e-2850.81Show/hide
Query:  MYSLLLDKNSLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGE
        +Y   +   S+ +EF+E E   + HPHND+LV+ L +AN KVHRIL+DGG+S D+ S  A+  M LG + L+SSLTPL+GFGGE++ P+G IELP+TF  
Subjt:  MYSLLLDKNSLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGE

Query:  GPWTVARLVNFLVVCCVPEYNAIL
         P ++ R+V+FLVV     YN IL
Subjt:  GPWTVARLVNFLVVCCVPEYNAIL

XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]2.3e-2853.6Show/hide
Query:  MYSLLLDKNSLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGE
        +Y   +++    +EF E EV  I HPHND+LV+ L +AN KVH IL+DGG+S D++S  A+ TM LG   L+SS  PLVGFGGE V P G IELPVTFG 
Subjt:  MYSLLLDKNSLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGE

Query:  GPWTVARLVNFLVVCCVPEYNAILG
        GP ++ ++V+FLVV      NAILG
Subjt:  GPWTVARLVNFLVVCCVPEYNAILG

XP_022154102.1 uncharacterized protein LOC111021438 [Momordica charantia]6.7e-2854.78Show/hide
Query:  SLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGEGPWTVARLV
        S  +EF++  V  + HPHND+L++ L +AN KVHRIL+DGG+S D +S  A+  M LG + L+SSLTPL+GFGGE+V P G IELPVTF  GP ++ ++V
Subjt:  SLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGEGPWTVARLV

Query:  NFLVVCCVPEYNAIL
        +FLVV     YNAIL
Subjt:  NFLVVCCVPEYNAIL

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]2.1e-2953.6Show/hide
Query:  MYSLLLDKNSLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGE
        +Y   +    + +EF+E E   + HPHND+LV+ L +ANVKVHRIL+DGG+S D++S  A+  M LG   L+SS  PLVGFGGE+V   G IELPVTFG 
Subjt:  MYSLLLDKNSLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGE

Query:  GPWTVARLVNFLVVCCVPEYNAILG
        GP +V ++V+FLVV     YNAILG
Subjt:  GPWTVARLVNFLVVCCVPEYNAILG

XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]3.0e-2852.07Show/hide
Query:  LLDKNSLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGEGPWT
        ++++    LEF+E E   + HPHND+LV+ L +AN KVHRIL+DGG+S  ++S  A+  M LG   L+SS  PLVGFGGE+V P G IELPV FG GP +
Subjt:  LLDKNSLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGEGPWT

Query:  VARLVNFLVVCCVPEYNAILG
        + ++V+FLVV     YN ILG
Subjt:  VARLVNFLVVCCVPEYNAILG

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159016.5e-2950.81Show/hide
Query:  MYSLLLDKNSLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGE
        +Y   +   S+ +EF+E E   + HPHND+LV+ L +AN KVHRIL+DGG+S D+ S  A+  M LG + L+SSLTPL+GFGGE++ P+G IELP+TF  
Subjt:  MYSLLLDKNSLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGE

Query:  GPWTVARLVNFLVVCCVPEYNAIL
         P ++ R+V+FLVV     YN IL
Subjt:  GPWTVARLVNFLVVCCVPEYNAIL

A0A6J1DAK4 uncharacterized protein LOC1110189021.1e-2853.6Show/hide
Query:  MYSLLLDKNSLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGE
        +Y   +++    +EF E EV  I HPHND+LV+ L +AN KVH IL+DGG+S D++S  A+ TM LG   L+SS  PLVGFGGE V P G IELPVTFG 
Subjt:  MYSLLLDKNSLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGE

Query:  GPWTVARLVNFLVVCCVPEYNAILG
        GP ++ ++V+FLVV      NAILG
Subjt:  GPWTVARLVNFLVVCCVPEYNAILG

A0A6J1DKR9 uncharacterized protein LOC1110214383.2e-2854.78Show/hide
Query:  SLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGEGPWTVARLV
        S  +EF++  V  + HPHND+L++ L +AN KVHRIL+DGG+S D +S  A+  M LG + L+SSLTPL+GFGGE+V P G IELPVTF  GP ++ ++V
Subjt:  SLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGEGPWTVARLV

Query:  NFLVVCCVPEYNAIL
        +FLVV     YNAIL
Subjt:  NFLVVCCVPEYNAIL

A0A6J1DP33 uncharacterized protein LOC1110228861.4e-2852.07Show/hide
Query:  LLDKNSLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGEGPWT
        ++++    LEF+E E   + HPHND+LV+ L +AN KVHRIL+DGG+S  ++S  A+  M LG   L+SS  PLVGFGGE+V P G IELPV FG GP +
Subjt:  LLDKNSLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGEGPWT

Query:  VARLVNFLVVCCVPEYNAILG
        + ++V+FLVV     YN ILG
Subjt:  VARLVNFLVVCCVPEYNAILG

A0A6J1DQY2 uncharacterized protein LOC1110223211.0e-2953.6Show/hide
Query:  MYSLLLDKNSLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGE
        +Y   +    + +EF+E E   + HPHND+LV+ L +ANVKVHRIL+DGG+S D++S  A+  M LG   L+SS  PLVGFGGE+V   G IELPVTFG 
Subjt:  MYSLLLDKNSLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGE

Query:  GPWTVARLVNFLVVCCVPEYNAILG
        GP +V ++V+FLVV     YNAILG
Subjt:  GPWTVARLVNFLVVCCVPEYNAILG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTCGCTCTTACTCGATAAAAACTCACTGAACTTAGAATTTACAGAGAAAGAGGTTGCAGGGATACATCACCCGCACAACGACTCGTTGGTAGTAGCCCTAACAGT
GGCCAATGTCAAAGTGCATCGAATTTTGATTGATGGAGGAAATTCAGTCGATGTCCTCTCGACTGTCGCGTTTTATACCATGAAGCTGGGAAACGATCGCCTAAGGTCGA
GCCTCACACCACTGGTGGGATTTGGCGGAGAAAAAGTGAGCCCAAGGGGAAACATTGAGCTTCCAGTGACGTTTGGGGAAGGACCATGGACAGTCGCAAGATTGGTCAAC
TTTCTGGTGGTATGTTGCGTCCCAGAATACAATGCCATTCTTGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACTCGCTCTTACTCGATAAAAACTCACTGAACTTAGAATTTACAGAGAAAGAGGTTGCAGGGATACATCACCCGCACAACGACTCGTTGGTAGTAGCCCTAACAGT
GGCCAATGTCAAAGTGCATCGAATTTTGATTGATGGAGGAAATTCAGTCGATGTCCTCTCGACTGTCGCGTTTTATACCATGAAGCTGGGAAACGATCGCCTAAGGTCGA
GCCTCACACCACTGGTGGGATTTGGCGGAGAAAAAGTGAGCCCAAGGGGAAACATTGAGCTTCCAGTGACGTTTGGGGAAGGACCATGGACAGTCGCAAGATTGGTCAAC
TTTCTGGTGGTATGTTGCGTCCCAGAATACAATGCCATTCTTGGGTGA
Protein sequenceShow/hide protein sequence
MYSLLLDKNSLNLEFTEKEVAGIHHPHNDSLVVALTVANVKVHRILIDGGNSVDVLSTVAFYTMKLGNDRLRSSLTPLVGFGGEKVSPRGNIELPVTFGEGPWTVARLVN
FLVVCCVPEYNAILG