; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041568 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041568
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon protein
Genome locationchr13:20669520..20673943
RNA-Seq ExpressionLag0041568
SyntenyLag0041568
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR027806 - Harbinger transposase-derived nuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34114.1 retrotransposon protein [Cucumis melo subsp. melo]6.2e-10863.19Show/hide
Query:  FLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQNCLGALDGTYVKINVSVLDRPRYRTRKGEIVTNVLVV
        FL  LAHDVK+RV++ +F RSGET+SRHFN V   V+RLHE L+KK +PV   CTD RW+WF+NCLGALDGTY+K+NV   DR RYRTRKGE+ TNVL V
Subjt:  FLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQNCLGALDGTYVKINVSVLDRPRYRTRKGEIVTNVLVV

Query:  CDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNALTTPKEFFNMKHSSARNVIERAFGLL
        CDT+GDF +VL GWEG AAD R+ RDA+S+PN LKV KGYYYL D GYPNAEGFLAPYRG+RYHL EWRG  NA +T KEFFNMKH SARNVIERAFG+L
Subjt:  CDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNALTTPKEFFNMKHSSARNVIERAFGLL

Query:  KGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDLDEND---------------------------------QFSRALRHTWTKNEDAKL
        KGRWAILR KSYYPV +Q RTI  CCLLHNLINREM + +I D++DE D                                   SR  +HTWTK E+A L
Subjt:  KGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDLDEND---------------------------------QFSRALRHTWTKNEDAKL

Query:  VESLVSL
        VE LV L
Subjt:  VESLVSL

KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]2.1e-10864.41Show/hide
Query:  LVLHLLQVSCRLNRNRGRRCRRDGCHFLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQNCLGALDGTYV
        ++ HLL+    L              FL  LAHDVKNRV++ +F RSGET+SRHFN V   V+RLH+ L+KK +PV   CTD RW+WF+NCLGALDGTY+
Subjt:  LVLHLLQVSCRLNRNRGRRCRRDGCHFLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQNCLGALDGTYV

Query:  KINVSVLDRPRYRTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNA
        K+NV   DR RYRTRKGE+ TNVL V DT+GDF +VL GWEG AAD R+ RDA+S+PN LKV KGYYYL D+GYPNAEGFLAPYRG+RYHL EWRG +NA
Subjt:  KINVSVLDRPRYRTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNA

Query:  LTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDLDENDQFSRALRHTWTKNEDAKLVE
         +T KEFFNMKHSSARNVIERAFG+LKGRWAILR KSY+PV +Q  TI  CCLLHNLINREM + +I D++      SR  +HTWTK E+A LVE
Subjt:  LTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDLDENDQFSRALRHTWTKNEDAKLVE

KAA0035620.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-10663.85Show/hide
Query:  LVLHLLQVSCRLNRNRGRRCRRDGCHFLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQNCLGALDGTYV
        ++ HLL+    L              FL  LAHDVKNRV++ +F RSGET+SRHFN V   V+RLHE L+KK +PV   CTD RW+WF+NCLGALDGTY+
Subjt:  LVLHLLQVSCRLNRNRGRRCRRDGCHFLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQNCLGALDGTYV

Query:  KINVSVLDRPRYRTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNA
        K+NV   DR RYRTRKGE+ TNVL VCDT+GDF +VL GWEG AAD R+ RDA+S+PN LKV KGYYYL D+GYPNAEGFLAPYRG+RYHL EWRG  NA
Subjt:  KINVSVLDRPRYRTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNA

Query:  LTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDLDENDQFSRALRHTWTKNEDAKLVES
         +T KEFFNMKHSSARNVIERAFG+LKGRWAILR KSYYPV +Q RTI  CCLLHNLINREM + +I D++DE D       H  T  +D   +E+
Subjt:  LTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDLDENDQFSRALRHTWTKNEDAKLVES

KAA0046727.1 retrotransposon protein [Cucumis melo var. makuwa]2.6e-10663.51Show/hide
Query:  LVLHLLQVSCRLNRNRGRRCRRDGCHFLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQNCLGALDGTYV
        ++ HLL+    L              FL  LAHDVKNRV++ +F RSGET+SRHFN V   V+RLH+ L+KK +PV   CTD RW+WF+NCLGALDGTY+
Subjt:  LVLHLLQVSCRLNRNRGRRCRRDGCHFLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQNCLGALDGTYV

Query:  KINVSVLDRPRYRTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNA
        K+NV   DR RYRTRKGE+ TNVL VCDT+GDF +VL GWEG AAD R+ RDA+S+PN LKV KGYYYL D+GYPNAEGFLAPYRG+RYHL EWRG  NA
Subjt:  KINVSVLDRPRYRTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNA

Query:  LTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDLDENDQFSRALRHTWTKNEDAKLVES
         +T KEFFNMKHSSARNVIERAFG+LKGRWAILR KSYYPV +Q RTI  CCLLHNLINREM + +I D++DE D       H  T  +D   +E+
Subjt:  LTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDLDENDQFSRALRHTWTKNEDAKLVES

XP_008455792.1 PREDICTED: putative nuclease HARBI1 [Cucumis melo]2.8e-10871.16Show/hide
Query:  LVLHLLQVSCRLNRNRGRRCRRDGCHFLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQNCLGALDGTYV
        ++ HLL+ +  L              FL  LAHDVKNR+++ +F RSGETVSRHFN V     RLH+ L+KK +PVT SCTDPRWKWF+NCLGALDGTY+
Subjt:  LVLHLLQVSCRLNRNRGRRCRRDGCHFLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQNCLGALDGTYV

Query:  KINVSVLDRPRYRTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNA
        K+NVS  DRPRYRTRKGE+ TNVL  CDT+GDF FVL GWEG AAD R+ RDAIS+ NGLKV KGYYYLCD+GYPNAEGFLAPYRGERYHL EWRG  NA
Subjt:  KINVSVLDRPRYRTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNA

Query:  LTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREI
         TT +EFFNMKHSSARNVIERAFGLLKGRWAILR KSYYPV +Q RTI  CCLLHNLINREM + EI
Subjt:  LTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREI

TrEMBL top hitse value%identityAlignment
A0A1S3C1U8 putative nuclease HARBI11.4e-10871.16Show/hide
Query:  LVLHLLQVSCRLNRNRGRRCRRDGCHFLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQNCLGALDGTYV
        ++ HLL+ +  L              FL  LAHDVKNR+++ +F RSGETVSRHFN V     RLH+ L+KK +PVT SCTDPRWKWF+NCLGALDGTY+
Subjt:  LVLHLLQVSCRLNRNRGRRCRRDGCHFLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQNCLGALDGTYV

Query:  KINVSVLDRPRYRTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNA
        K+NVS  DRPRYRTRKGE+ TNVL  CDT+GDF FVL GWEG AAD R+ RDAIS+ NGLKV KGYYYLCD+GYPNAEGFLAPYRGERYHL EWRG  NA
Subjt:  KINVSVLDRPRYRTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNA

Query:  LTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREI
         TT +EFFNMKHSSARNVIERAFGLLKGRWAILR KSYYPV +Q RTI  CCLLHNLINREM + EI
Subjt:  LTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREI

A0A5A7SWD8 Retrotransposon protein1.0e-10864.41Show/hide
Query:  LVLHLLQVSCRLNRNRGRRCRRDGCHFLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQNCLGALDGTYV
        ++ HLL+    L              FL  LAHDVKNRV++ +F RSGET+SRHFN V   V+RLH+ L+KK +PV   CTD RW+WF+NCLGALDGTY+
Subjt:  LVLHLLQVSCRLNRNRGRRCRRDGCHFLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQNCLGALDGTYV

Query:  KINVSVLDRPRYRTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNA
        K+NV   DR RYRTRKGE+ TNVL V DT+GDF +VL GWEG AAD R+ RDA+S+PN LKV KGYYYL D+GYPNAEGFLAPYRG+RYHL EWRG +NA
Subjt:  KINVSVLDRPRYRTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNA

Query:  LTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDLDENDQFSRALRHTWTKNEDAKLVE
         +T KEFFNMKHSSARNVIERAFG+LKGRWAILR KSY+PV +Q  TI  CCLLHNLINREM + +I D++      SR  +HTWTK E+A LVE
Subjt:  LTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDLDENDQFSRALRHTWTKNEDAKLVE

A0A5A7TXW1 Retrotransposon protein1.3e-10663.51Show/hide
Query:  LVLHLLQVSCRLNRNRGRRCRRDGCHFLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQNCLGALDGTYV
        ++ HLL+    L              FL  LAHDVKNRV++ +F RSGET+SRHFN V   V+RLH+ L+KK +PV   CTD RW+WF+NCLGALDGTY+
Subjt:  LVLHLLQVSCRLNRNRGRRCRRDGCHFLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQNCLGALDGTYV

Query:  KINVSVLDRPRYRTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNA
        K+NV   DR RYRTRKGE+ TNVL VCDT+GDF +VL GWEG AAD R+ RDA+S+PN LKV KGYYYL D+GYPNAEGFLAPYRG+RYHL EWRG  NA
Subjt:  KINVSVLDRPRYRTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNA

Query:  LTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDLDENDQFSRALRHTWTKNEDAKLVES
         +T KEFFNMKHSSARNVIERAFG+LKGRWAILR KSYYPV +Q RTI  CCLLHNLINREM + +I D++DE D       H  T  +D   +E+
Subjt:  LTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDLDENDQFSRALRHTWTKNEDAKLVES

A0A5D3BDX0 Retrotransposon protein5.7e-10763.85Show/hide
Query:  LVLHLLQVSCRLNRNRGRRCRRDGCHFLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQNCLGALDGTYV
        ++ HLL+    L              FL  LAHDVKNRV++ +F RSGET+SRHFN V   V+RLHE L+KK +PV   CTD RW+WF+NCLGALDGTY+
Subjt:  LVLHLLQVSCRLNRNRGRRCRRDGCHFLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQNCLGALDGTYV

Query:  KINVSVLDRPRYRTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNA
        K+NV   DR RYRTRKGE+ TNVL VCDT+GDF +VL GWEG AAD R+ RDA+S+PN LKV KGYYYL D+GYPNAEGFLAPYRG+RYHL EWRG  NA
Subjt:  KINVSVLDRPRYRTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNA

Query:  LTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDLDENDQFSRALRHTWTKNEDAKLVES
         +T KEFFNMKHSSARNVIERAFG+LKGRWAILR KSYYPV +Q RTI  CCLLHNLINREM + +I D++DE D       H  T  +D   +E+
Subjt:  LTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDLDENDQFSRALRHTWTKNEDAKLVES

E5GCB5 Retrotransposon protein3.0e-10863.19Show/hide
Query:  FLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQNCLGALDGTYVKINVSVLDRPRYRTRKGEIVTNVLVV
        FL  LAHDVK+RV++ +F RSGET+SRHFN V   V+RLHE L+KK +PV   CTD RW+WF+NCLGALDGTY+K+NV   DR RYRTRKGE+ TNVL V
Subjt:  FLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQNCLGALDGTYVKINVSVLDRPRYRTRKGEIVTNVLVV

Query:  CDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNALTTPKEFFNMKHSSARNVIERAFGLL
        CDT+GDF +VL GWEG AAD R+ RDA+S+PN LKV KGYYYL D GYPNAEGFLAPYRG+RYHL EWRG  NA +T KEFFNMKH SARNVIERAFG+L
Subjt:  CDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNALTTPKEFFNMKHSSARNVIERAFGLL

Query:  KGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDLDEND---------------------------------QFSRALRHTWTKNEDAKL
        KGRWAILR KSYYPV +Q RTI  CCLLHNLINREM + +I D++DE D                                   SR  +HTWTK E+A L
Subjt:  KGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDLDEND---------------------------------QFSRALRHTWTKNEDAKL

Query:  VESLVSL
        VE LV L
Subjt:  VESLVSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein1.8e-2031.8Show/hide
Query:  FLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSE-------PVTTSCTDPRWKWFQNCLGALDGTYVKINVSVLDRPRYRTRKGEI
        FL    H+   R V  +F R+ ETV R F  V      L    I+          P         W +F   +GA+DGT+V + V    +  Y  R    
Subjt:  FLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSE-------PVTTSCTDPRWKWFQNCLGALDGTYVKINVSVLDRPRYRTRKGEI

Query:  VTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKG-YYYLCDSGYPNAEGFLAPYRGE-----RYHLFE-WRGARNALTTPKEFFNMKH
          N++ +CD +  FT++  G  G   D  V + A    +   +     YYL DSGYPN +G LAPYR       RYH+ + + G R       E FN  H
Subjt:  VTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKG-YYYLCDSGYPNAEGFLAPYRGE-----RYHLFE-WRGARNALTTPKEFFNMKH

Query:  SSARNVIERAFGLLKGR
        +S R+VIER F + K +
Subjt:  SSARNVIERAFGLLKGR

AT5G12010.1 unknown protein6.2e-1326.7Show/hide
Query:  NCLGALDGTYV-----KINVSVLDRPRY--RTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAI--SQPNGLKVSKGYYYLCDSGYPNAEGF
        N +G++  T++     KI+V+     R+  R +K      +  V + +G FT +  GW G   D +V   ++   + N   + KG +     G+P  +  
Subjt:  NCLGALDGTYV-----KINVSVLDRPRY--RTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAI--SQPNGLKVSKGYYYLCDSGYPNAEGF

Query:  LAPYRGERYHLFEWRGARNALTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDL
        L PY             +  LT  +  FN K S  + V + AFG LKGRWA L+ ++   ++     +  CC+LHN+   EM + ++  +L
Subjt:  LAPYRGERYHLFEWRGARNALTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDL

AT5G28950.1 unknown protein2.3e-1240.28Show/hide
Query:  WKWFQNCLGALDGTYVKINVSVLDRPRYRTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQ
        + +F++C+GA+D T++   VS    P +R RKG+I  N+L  C+ + +F +VL GWEG A D +V  DA+++
Subjt:  WKWFQNCLGALDGTYVKINVSVLDRPRYRTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQ

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.3e-2642.55Show/hide
Query:  FTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNALTTPKEFFNMKHSSARNVIERAFGLLKGRWAI
        F +VL GWEG A D RV  DA+ +          +YL D G+ N   FLAP+RG RYHL E+ G R    TP E FN++H S RNVIER FG+ K R+AI
Subjt:  FTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNALTTPKEFFNMKHSSARNVIERAFGLLKGRWAI

Query:  LRSKSYYPVRIQGRTITTCCLLHNLINRE--MGDREIPDDL
         +S   +  + Q   + TC  LHN + +E    + + PD++
Subjt:  LRSKSYYPVRIQGRTITTCCLLHNLINRE--MGDREIPDDL

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)5.9e-4035.37Show/hide
Query:  FLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIK-KSEPVTTSCTDPRWKWFQNCLGALDGTYVKINVSVLDRPRYRTRKGEIVTNVLV
        FL  + H+++ R V+  F  SGET+SRHFN+V + V+ + +   +  S   T    DP   +F++C+G +D  ++ + V V ++  +R   G +  NVL 
Subjt:  FLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIK-KSEPVTTSCTDPRWKWFQNCLGALDGTYVKINVSVLDRPRYRTRKGEIVTNVLV

Query:  VCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNALTTPKEFFNMKHSSARNVIERAFGL
            +  F +VL GWEG A+D +V   A+++ N L+V +G YY+ D+ YPN  GF+APY G          + N+    KE FN +H      I R FG 
Subjt:  VCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARNALTTPKEFFNMKHSSARNVIERAFGL

Query:  LKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDL
        LK R+ IL S   YP++ Q + +   C LHN +  E      PDDL
Subjt:  LKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGTAGACCTACCACGAAGAACAAAGACAGGTCATTGATGTCTTGGATCGATTCTGAAGCAAGCCGTTCGCCGGTCAGACGTTTTGGCATAATTGGTCTGTGCGT
TGTGGTGTCGTGTGGGGAAGACGCACCAAAACACGGGTTGTTGGGCGATGTCGCGTGGGAAGAAGGTCGTCGGTGTGGAAGCAGTGACTTTTCGACAACAGTGTTGAGAC
TTTTCTGGCAGCACATGCAGATGGGAAGGGGAGGAAGAAGATCTCACTCTGCAACGACGGAAGTGGAGAGGAAGGGAAGGAAGGAGAGATTGAGAATGGTTGGGAAAAGA
GAGGGAAATAAAAGAGGGAAAAGGGCGGACTCCTACTCCAAGGAAAATGGTTTTTCCTCACACTTGGTTCTCCATCTCCTCCAAGTAAGTTGTCGACTTAACCGGAACAG
AGGTCGTAGATGTAGAAGAGATGGTTGCCATTTTCTTACACACCTAGCCCATGACGTTAAAAATCGAGTAGTTCGTACGCAGTTCGCTAGGTCTGGGGAGACAGTTTCTA
GGCACTTCAACTCTGTCCCTCACGGGGTGTTACGACTACATGAAGTTCTTATAAAAAAATCTGAGCCAGTCACGACCTCCTGTACGGATCCGAGGTGGAAATGGTTTCAG
AATTGCCTTGGTGCGTTAGATGGAACATACGTCAAGATCAACGTCAGTGTCCTCGATCGTCCGAGGTATAGAACAAGGAAAGGTGAAATTGTAACAAACGTGCTTGTTGT
TTGTGATACAGAAGGAGATTTCACATTCGTCCTACCTGGGTGGGAAGGGTATGCCGCTGATTATCGAGTTCGTAGAGATGCAATATCACAACCGAACGGACTAAAAGTTT
CGAAGGGATATTATTATCTGTGCGATTCTGGGTACCCTAATGCAGAGGGTTTCCTGGCACCGTATAGAGGGGAACGTTACCACCTATTTGAATGGCGTGGTGCGAGGAAT
GCACTAACTACTCCCAAAGAATTCTTCAACATGAAGCATTCATCTGCAAGGAATGTGATCGAGAGGGCATTCGGTTTGTTAAAAGGAAGGTGGGCCATCCTCCGCTCGAA
ATCGTACTATCCAGTTCGAATTCAAGGACGGACCATTACAACGTGCTGCTTACTGCACAATCTTATCAATAGGGAGATGGGTGACCGTGAAATTCCCGATGATCTAGATG
AGAATGACCAGTTCTCTAGAGCTCTAAGACACACGTGGACGAAGAACGAGGACGCGAAGCTTGTTGAGTCCCTCGTGTCCTTGTTCATGTTGGCAGTTGGAGCTCCGATA
ATGGGACGTTTAGATCTGGGTATCAAGTGCAACTGGAACACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGTAGACCTACCACGAAGAACAAAGACAGGTCATTGATGTCTTGGATCGATTCTGAAGCAAGCCGTTCGCCGGTCAGACGTTTTGGCATAATTGGTCTGTGCGT
TGTGGTGTCGTGTGGGGAAGACGCACCAAAACACGGGTTGTTGGGCGATGTCGCGTGGGAAGAAGGTCGTCGGTGTGGAAGCAGTGACTTTTCGACAACAGTGTTGAGAC
TTTTCTGGCAGCACATGCAGATGGGAAGGGGAGGAAGAAGATCTCACTCTGCAACGACGGAAGTGGAGAGGAAGGGAAGGAAGGAGAGATTGAGAATGGTTGGGAAAAGA
GAGGGAAATAAAAGAGGGAAAAGGGCGGACTCCTACTCCAAGGAAAATGGTTTTTCCTCACACTTGGTTCTCCATCTCCTCCAAGTAAGTTGTCGACTTAACCGGAACAG
AGGTCGTAGATGTAGAAGAGATGGTTGCCATTTTCTTACACACCTAGCCCATGACGTTAAAAATCGAGTAGTTCGTACGCAGTTCGCTAGGTCTGGGGAGACAGTTTCTA
GGCACTTCAACTCTGTCCCTCACGGGGTGTTACGACTACATGAAGTTCTTATAAAAAAATCTGAGCCAGTCACGACCTCCTGTACGGATCCGAGGTGGAAATGGTTTCAG
AATTGCCTTGGTGCGTTAGATGGAACATACGTCAAGATCAACGTCAGTGTCCTCGATCGTCCGAGGTATAGAACAAGGAAAGGTGAAATTGTAACAAACGTGCTTGTTGT
TTGTGATACAGAAGGAGATTTCACATTCGTCCTACCTGGGTGGGAAGGGTATGCCGCTGATTATCGAGTTCGTAGAGATGCAATATCACAACCGAACGGACTAAAAGTTT
CGAAGGGATATTATTATCTGTGCGATTCTGGGTACCCTAATGCAGAGGGTTTCCTGGCACCGTATAGAGGGGAACGTTACCACCTATTTGAATGGCGTGGTGCGAGGAAT
GCACTAACTACTCCCAAAGAATTCTTCAACATGAAGCATTCATCTGCAAGGAATGTGATCGAGAGGGCATTCGGTTTGTTAAAAGGAAGGTGGGCCATCCTCCGCTCGAA
ATCGTACTATCCAGTTCGAATTCAAGGACGGACCATTACAACGTGCTGCTTACTGCACAATCTTATCAATAGGGAGATGGGTGACCGTGAAATTCCCGATGATCTAGATG
AGAATGACCAGTTCTCTAGAGCTCTAAGACACACGTGGACGAAGAACGAGGACGCGAAGCTTGTTGAGTCCCTCGTGTCCTTGTTCATGTTGGCAGTTGGAGCTCCGATA
ATGGGACGTTTAGATCTGGGTATCAAGTGCAACTGGAACACTTGA
Protein sequenceShow/hide protein sequence
MEGRPTTKNKDRSLMSWIDSEASRSPVRRFGIIGLCVVVSCGEDAPKHGLLGDVAWEEGRRCGSSDFSTTVLRLFWQHMQMGRGGRRSHSATTEVERKGRKERLRMVGKR
EGNKRGKRADSYSKENGFSSHLVLHLLQVSCRLNRNRGRRCRRDGCHFLTHLAHDVKNRVVRTQFARSGETVSRHFNSVPHGVLRLHEVLIKKSEPVTTSCTDPRWKWFQ
NCLGALDGTYVKINVSVLDRPRYRTRKGEIVTNVLVVCDTEGDFTFVLPGWEGYAADYRVRRDAISQPNGLKVSKGYYYLCDSGYPNAEGFLAPYRGERYHLFEWRGARN
ALTTPKEFFNMKHSSARNVIERAFGLLKGRWAILRSKSYYPVRIQGRTITTCCLLHNLINREMGDREIPDDLDENDQFSRALRHTWTKNEDAKLVESLVSLFMLAVGAPI
MGRLDLGIKCNWNT