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Lag0041570 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041570
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr13:20809122..20809439
RNA-Seq ExpressionLag0041570
SyntenyLag0041570
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010686122.1 PREDICTED: uncharacterized protein LOC104900404 [Beta vulgaris subsp. vulgaris]4.3e-2046.15Show/hide
Query:  KANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVF
        KA+QR+K NRIKGL+D+ GEW   EE+L RL  +YFR +FTSS+P+   M+++L+ +   V    ND+L++ +S+EE++  +K M P KAP  DG+ A+F
Subjt:  KANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVF

Query:  DQKY
         Q++
Subjt:  DQKY

XP_021736509.1 uncharacterized protein LOC110703057 [Chenopodium quinoa]1.9e-1543.27Show/hide
Query:  KANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVF
        KA+QRRK N I+GLYD DG W   +E    + +  + +LFTS+NP  E  +K+L+ +   + D  N  L+R +++EEV   +K M P KAP  DGM A+F
Subjt:  KANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVF

Query:  DQKY
         QK+
Subjt:  DQKY

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]5.3e-1846.15Show/hide
Query:  KANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVF
        +A++RRK N I G++D+ G W   EE +A+ A  YF ++++SS+P+Q  +E++ EAIP +V +  N+ L+R F++EEV V +K + P KAP  DGM AVF
Subjt:  KANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVF

Query:  DQKY
         QKY
Subjt:  DQKY

XP_023906330.1 uncharacterized protein LOC112018052 [Quercus suber]2.4e-1541.35Show/hide
Query:  KANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVF
        +A QR++ N+I G+++  GEW + E+ +A +A EYF+SLFTSS P  + + ++LEA+  RV D  N  L+  ++ EE+   +  M P+KAP  DGM   F
Subjt:  KANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVF

Query:  DQKY
         QK+
Subjt:  DQKY

XP_030939839.1 uncharacterized protein LOC115964720 [Quercus lobata]1.1e-1543.27Show/hide
Query:  KANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVF
        +A++R+K N I GL+DD+G W    + +A +A  YFR+++TSS P     + +  AIP RV D  N  L++ FS++E+ + +K M PTKAP  DGM A+F
Subjt:  KANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVF

Query:  DQKY
          KY
Subjt:  DQKY

TrEMBL top hitse value%identityAlignment
A0A2N9EEA9 CCHC-type domain-containing protein9.0e-1647.12Show/hide
Query:  KANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVF
        + NQRRKTN I GL D DG W + +  +A LA EYFR++FTSS P    ++  L  +   V    ND L++ FS EEV   +  M PTKAP  DGM A+F
Subjt:  KANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVF

Query:  DQKY
         Q Y
Subjt:  DQKY

A0A2N9GPZ7 Reverse transcriptase domain-containing protein6.3e-1743.27Show/hide
Query:  KANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVF
        + N+RR+TN I GL D DG W + +  +A +A +YF+ +FTSSNP+ E +  +L+ +   V +  ND L   F+++EV++ +K M PTKAP  DGM A+F
Subjt:  KANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVF

Query:  DQKY
         Q Y
Subjt:  DQKY

A0A2N9HND5 CCHC-type domain-containing protein9.0e-1647.12Show/hide
Query:  KANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVF
        + NQRRKTN I GL D DG W + +  +A LA EYFR++FTSS P    ++  L  +   V    ND L++ FS EEV   +  M PTKAP  DGM A+F
Subjt:  KANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVF

Query:  DQKY
         Q Y
Subjt:  DQKY

A0A2N9IPS8 Reverse transcriptase domain-containing protein6.3e-1743.27Show/hide
Query:  KANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVF
        + N+RR+TN I GL D DG W + +  +A +A +YF+ +FTSSNP+ E +  +L+ +   V +  ND L   F+++EV++ +K M PTKAP  DGM A+F
Subjt:  KANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVF

Query:  DQKY
         Q Y
Subjt:  DQKY

A0A7N2MR00 Uncharacterized protein3.1e-1646.15Show/hide
Query:  KANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVF
        K +QRRK N I G++D++G W    E +A  A  YF++LFT+SNP +  + +    IP +V D  N  L+  F+REEV   +K M PTKAP  DGM A+F
Subjt:  KANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVF

Query:  DQKY
         QKY
Subjt:  DQKY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCTAATCAGAGACGAAAAACCAATAGAATCAAGGGTCTATATGATGATGATGGAGAATGGACTTCCAGAGAGGAAGATTTGGCTCGATTGGCCAATGAGTATTT
CCGGAGTCTATTTACTTCTTCCAATCCAAATCAGGAGCCCATGGAGAAGATTCTGGAGGCAATTCCTCATCGAGTCCAAGACAGACAAAATGATGTCCTCATGCGCAGGT
TTTCTAGGGAAGAGGTTAATGTGGTGATCAAAAGTATGCAGCCAACCAAAGCGCCATGTTCGGATGGGATGCAAGCGGTGTTTGACCAGAAATACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCTAATCAGAGACGAAAAACCAATAGAATCAAGGGTCTATATGATGATGATGGAGAATGGACTTCCAGAGAGGAAGATTTGGCTCGATTGGCCAATGAGTATTT
CCGGAGTCTATTTACTTCTTCCAATCCAAATCAGGAGCCCATGGAGAAGATTCTGGAGGCAATTCCTCATCGAGTCCAAGACAGACAAAATGATGTCCTCATGCGCAGGT
TTTCTAGGGAAGAGGTTAATGTGGTGATCAAAAGTATGCAGCCAACCAAAGCGCCATGTTCGGATGGGATGCAAGCGGTGTTTGACCAGAAATACTGA
Protein sequenceShow/hide protein sequence
MKANQRRKTNRIKGLYDDDGEWTSREEDLARLANEYFRSLFTSSNPNQEPMEKILEAIPHRVQDRQNDVLMRRFSREEVNVVIKSMQPTKAPCSDGMQAVFDQKY