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Lag0041571 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041571
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4
Genome locationchr13:20812875..20814283
RNA-Seq ExpressionLag0041571
SyntenyLag0041571
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0032196 - transposition (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025876.1 uncharacterized protein E6C27_scaffold34G001550 [Cucumis melo var. makuwa]8.2e-3454.92Show/hide
Query:  RGRCNCTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQEVDSNDRFKFFFMSIAASINEWKHCLPVISVD
        R    C P D+I Y +  H +NISYDKAW GRE ALN +RG+PE SYA +  F+  LI  N GTYTA+E D   RFKF+FM++AASI+ W +C+PVISVD
Subjt:  RGRCNCTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQEVDSNDRFKFFFMSIAASINEWKHCLPVISVD

Query:  GTSLKNKFSGTFLTACTFDGSA
        G ++KNK+ GT ++ CT DG++
Subjt:  GTSLKNKFSGTFLTACTFDGSA

KAA0040870.1 uncharacterized protein E6C27_scaffold345G00200 [Cucumis melo var. makuwa]2.5e-3558.12Show/hide
Query:  CTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQEVDSNDRFKFFFMSIAASINEWKHCLPVISVDGTSLK
        C P D+I Y +  HG+NISYDKAWRGRE ALN +RG+P+ SYA +  F+  LI  N GTYTA+E D   RFKF+FM++AASI+ W +C+PVISVDG ++K
Subjt:  CTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQEVDSNDRFKFFFMSIAASINEWKHCLPVISVDGTSLK

Query:  NKFSGTFLTACTFDGSA
        NK+ GT ++ACT DG++
Subjt:  NKFSGTFLTACTFDGSA

TYK22587.1 uncharacterized protein E5676_scaffold195G00040 [Cucumis melo var. makuwa]1.3e-3455.74Show/hide
Query:  RGRCNCTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQEVDSNDRFKFFFMSIAASINEWKHCLPVISVD
        R    C P D+I Y +  H +NISYDKAWRGRE ALN +RG+PE SYA +  F+  LI  N GTYTA+E D   RFKF+FM++AASI+ W +C+PVISVD
Subjt:  RGRCNCTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQEVDSNDRFKFFFMSIAASINEWKHCLPVISVD

Query:  GTSLKNKFSGTFLTACTFDGSA
        G ++KNK+ GT ++ CT DG++
Subjt:  GTSLKNKFSGTFLTACTFDGSA

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]2.0e-3551.43Show/hide
Query:  KMGKEWEVGRKKGSELRKRGRCNCTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQEVDSNDRFKFFFMS
        K    W V        +   +  C P D+I Y +  HG+NISYDKAWRGRE ALN +RG+PE SYA +  F+  LI  N GTYTA+E D   RFKF+FM+
Subjt:  KMGKEWEVGRKKGSELRKRGRCNCTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQEVDSNDRFKFFFMS

Query:  IAASINEWKHCLPVISVDGTSLKNKFSGTFLTACTFDGSA
        +AASI+ W +C+PVISVDG ++KNK+ GT ++ACT DG++
Subjt:  IAASINEWKHCLPVISVDGTSLKNKFSGTFLTACTFDGSA

XP_016902696.1 PREDICTED: uncharacterized protein LOC107991824 [Cucumis melo]5.7e-3558.12Show/hide
Query:  CTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQEVDSNDRFKFFFMSIAASINEWKHCLPVISVDGTSLK
        C P D+I Y +  H +NISYDKAWRGRE ALN +RG+PE SYA +  F+  LI  N GTYTA+E D   RFKF+FM++AASI+ W +C+PVISVDG ++K
Subjt:  CTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQEVDSNDRFKFFFMSIAASINEWKHCLPVISVDGTSLK

Query:  NKFSGTFLTACTFDGSA
        NK+ GT ++ACT DG++
Subjt:  NKFSGTFLTACTFDGSA

TrEMBL top hitse value%identityAlignment
A0A1S4E392 uncharacterized protein LOC1079918242.7e-3558.12Show/hide
Query:  CTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQEVDSNDRFKFFFMSIAASINEWKHCLPVISVDGTSLK
        C P D+I Y +  H +NISYDKAWRGRE ALN +RG+PE SYA +  F+  LI  N GTYTA+E D   RFKF+FM++AASI+ W +C+PVISVDG ++K
Subjt:  CTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQEVDSNDRFKFFFMSIAASINEWKHCLPVISVDGTSLK

Query:  NKFSGTFLTACTFDGSA
        NK+ GT ++ACT DG++
Subjt:  NKFSGTFLTACTFDGSA

A0A5A7SJA0 Uncharacterized protein4.0e-3454.92Show/hide
Query:  RGRCNCTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQEVDSNDRFKFFFMSIAASINEWKHCLPVISVD
        R    C P D+I Y +  H +NISYDKAW GRE ALN +RG+PE SYA +  F+  LI  N GTYTA+E D   RFKF+FM++AASI+ W +C+PVISVD
Subjt:  RGRCNCTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQEVDSNDRFKFFFMSIAASINEWKHCLPVISVD

Query:  GTSLKNKFSGTFLTACTFDGSA
        G ++KNK+ GT ++ CT DG++
Subjt:  GTSLKNKFSGTFLTACTFDGSA

A0A5A7TC03 ZnF_PMZ domain-containing protein1.2e-3558.12Show/hide
Query:  CTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQEVDSNDRFKFFFMSIAASINEWKHCLPVISVDGTSLK
        C P D+I Y +  HG+NISYDKAWRGRE ALN +RG+P+ SYA +  F+  LI  N GTYTA+E D   RFKF+FM++AASI+ W +C+PVISVDG ++K
Subjt:  CTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQEVDSNDRFKFFFMSIAASINEWKHCLPVISVDGTSLK

Query:  NKFSGTFLTACTFDGSA
        NK+ GT ++ACT DG++
Subjt:  NKFSGTFLTACTFDGSA

A0A5D3DFW1 Uncharacterized protein6.1e-3555.74Show/hide
Query:  RGRCNCTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQEVDSNDRFKFFFMSIAASINEWKHCLPVISVD
        R    C P D+I Y +  H +NISYDKAWRGRE ALN +RG+PE SYA +  F+  LI  N GTYTA+E D   RFKF+FM++AASI+ W +C+PVISVD
Subjt:  RGRCNCTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQEVDSNDRFKFFFMSIAASINEWKHCLPVISVD

Query:  GTSLKNKFSGTFLTACTFDGSA
        G ++KNK+ GT ++ CT DG++
Subjt:  GTSLKNKFSGTFLTACTFDGSA

A0A5D3E198 MuDRA-like transposase9.4e-3651.43Show/hide
Query:  KMGKEWEVGRKKGSELRKRGRCNCTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQEVDSNDRFKFFFMS
        K    W V        +   +  C P D+I Y +  HG+NISYDKAWRGRE ALN +RG+PE SYA +  F+  LI  N GTYTA+E D   RFKF+FM+
Subjt:  KMGKEWEVGRKKGSELRKRGRCNCTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQEVDSNDRFKFFFMS

Query:  IAASINEWKHCLPVISVDGTSLKNKFSGTFLTACTFDGSA
        +AASI+ W +C+PVISVDG ++KNK+ GT ++ACT DG++
Subjt:  IAASINEWKHCLPVISVDGTSLKNKFSGTFLTACTFDGSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAAGAATGGGAGGTTGGGAGAAAGAAGGGGAGTGAGTTGAGAAAGAGGGGGAGTGAGTTGAGAAAGATGGGGAAAGAATGGGAGGTTGGGAGAAAGAAGGGGAG
TGAGTTGAGAAAGAGGGGGAGATGCAACTGTACACCTCGGGACATAATAGAGTATGCTAGGAAAACGCACGGGATCAATATCAGTTATGACAAAGCATGGAGGGGTAGAG
AAAAGGCGTTAAATGAGTTGAGAGGATCTCCTGAAGTGTCTTATGCGCAAATTCCGTTGTTTGCTGCCAAGTTGATCGAAAGGAATTCAGGTACGTACACCGCCCAGGAA
GTTGATTCAAATGACAGGTTCAAGTTCTTCTTCATGAGTATTGCAGCATCCATAAACGAGTGGAAACACTGTCTCCCAGTTATTTCGGTAGATGGTACATCTTTGAAGAA
TAAATTCAGTGGCACCTTTTTGACGGCCTGCACATTTGATGGGTCGGCGGGAGGAGGTCTACACGAAGGCGATGGTTGGAGGTTGGATCGGCGGGAGGTGGGGGTCGGCG
GTCTGTATGAAGAAGGACTGGCGTTTGTGGGAAGATGGAGGGTTTTGCTTGTCTTGAAGAGGGCTGTTTGTGGGAGATGGAGGGTTTTGCTGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAAGAATGGGAGGTTGGGAGAAAGAAGGGGAGTGAGTTGAGAAAGAGGGGGAGTGAGTTGAGAAAGATGGGGAAAGAATGGGAGGTTGGGAGAAAGAAGGGGAG
TGAGTTGAGAAAGAGGGGGAGATGCAACTGTACACCTCGGGACATAATAGAGTATGCTAGGAAAACGCACGGGATCAATATCAGTTATGACAAAGCATGGAGGGGTAGAG
AAAAGGCGTTAAATGAGTTGAGAGGATCTCCTGAAGTGTCTTATGCGCAAATTCCGTTGTTTGCTGCCAAGTTGATCGAAAGGAATTCAGGTACGTACACCGCCCAGGAA
GTTGATTCAAATGACAGGTTCAAGTTCTTCTTCATGAGTATTGCAGCATCCATAAACGAGTGGAAACACTGTCTCCCAGTTATTTCGGTAGATGGTACATCTTTGAAGAA
TAAATTCAGTGGCACCTTTTTGACGGCCTGCACATTTGATGGGTCGGCGGGAGGAGGTCTACACGAAGGCGATGGTTGGAGGTTGGATCGGCGGGAGGTGGGGGTCGGCG
GTCTGTATGAAGAAGGACTGGCGTTTGTGGGAAGATGGAGGGTTTTGCTTGTCTTGAAGAGGGCTGTTTGTGGGAGATGGAGGGTTTTGCTGATTTGA
Protein sequenceShow/hide protein sequence
MGKEWEVGRKKGSELRKRGSELRKMGKEWEVGRKKGSELRKRGRCNCTPRDIIEYARKTHGINISYDKAWRGREKALNELRGSPEVSYAQIPLFAAKLIERNSGTYTAQE
VDSNDRFKFFFMSIAASINEWKHCLPVISVDGTSLKNKFSGTFLTACTFDGSAGGGLHEGDGWRLDRREVGVGGLYEEGLAFVGRWRVLLVLKRAVCGRWRVLLI