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Lag0041583 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041583
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr13:21195581..21196813
RNA-Seq ExpressionLag0041583
SyntenyLag0041583
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU10586.1 hypothetical protein TSUD_419610, partial [Trifolium subterraneum]9.5e-0740Show/hide
Query:  MSEDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHWISFDQSNFGLTSDDRRMLDSASGCDVLGTTPGEAWEII
        ++EDH KLR FP+SLQG A+ W++ L   SV+SW D++            GL   D+ +LD+ASG  ++  TP  A  +I
Subjt:  MSEDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHWISFDQSNFGLTSDDRRMLDSASGCDVLGTTPGEAWEII

GFY98428.1 hypothetical protein Acr_12g0009690 [Actinidia rufa]9.5e-0738.27Show/hide
Query:  MSEDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHWISFDQSNFGLTSDDRRMLDSASGCDVLGTTPGEAWEIIA
        ++E+  KLR FP+SL+  A+ W++ LPSGS+++W +++S   +       GL   DR M+D+ASG  ++  TP  A  +IA
Subjt:  MSEDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHWISFDQSNFGLTSDDRRMLDSASGCDVLGTTPGEAWEIIA

XP_014489689.1 uncharacterized protein LOC106752509 [Vigna radiata var. radiata]2.8e-0639.53Show/hide
Query:  EDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHWISFDQSNF------GLTSDDRRMLDSASGCDVLGTTPGEAWEIIAK
        +D F LR FPYSL+  AR+W++ L   +++SW D++S       ++        GL S DR M+D+ASG  +  TTP EA ++I K
Subjt:  EDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHWISFDQSNF------GLTSDDRRMLDSASGCDVLGTTPGEAWEIIAK

XP_023748966.1 uncharacterized protein LOC111897240 [Lactuca sativa]1.9e-0737.36Show/hide
Query:  MSEDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHW--------ISFDQSN-FGLTSDDRRMLDSASGCDVLGTTPGEAWEIIAK
        ++ED  KLR FP+SLQ  AR+W++ LPSGS+++W ++  +          +S  +S   GLT  +RR+++++SG  +   TP E  E+I K
Subjt:  MSEDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHW--------ISFDQSN-FGLTSDDRRMLDSASGCDVLGTTPGEAWEIIAK

XP_027166611.1 uncharacterized protein LOC113766639 [Coffea eugenioides]1.6e-0632.63Show/hide
Query:  MSEDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHWISFDQSNF---------------GLTSDDRRMLDSASGCDVLGTTPGEAWEII
        ++E+  +LR FP+SL+  A+ W++ LP+GS+++W  ++      F  ++                GL S DR ++D+ASG  +   TP EAWE+I
Subjt:  MSEDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHWISFDQSNF---------------GLTSDDRRMLDSASGCDVLGTTPGEAWEII

TrEMBL top hitse value%identityAlignment
A0A1B5Z8Z7 Uncharacterized protein (Fragment)4.6e-0740Show/hide
Query:  MSEDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHWISFDQSNFGLTSDDRRMLDSASGCDVLGTTPGEAWEII
        ++EDH KLR FP+SLQG A+ W++ L   SV+SW D++            GL   D+ +LD+ASG  ++  TP  A  +I
Subjt:  MSEDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHWISFDQSNFGLTSDDRRMLDSASGCDVLGTTPGEAWEII

A0A1S3T7F7 uncharacterized protein LOC1067525091.3e-0639.53Show/hide
Query:  EDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHWISFDQSNF------GLTSDDRRMLDSASGCDVLGTTPGEAWEIIAK
        +D F LR FPYSL+  AR+W++ L   +++SW D++S       ++        GL S DR M+D+ASG  +  TTP EA ++I K
Subjt:  EDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHWISFDQSNF------GLTSDDRRMLDSASGCDVLGTTPGEAWEIIAK

A0A1S3W0R2 uncharacterized protein LOC1067802881.5e-0538.75Show/hide
Query:  EDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHWISFDQSNFGLTSDDRRMLDSASGCDVLGTTPGEAWEIIAK
        ED   LR+FPYSL+  AR+W++ L   S++SW D++S+               DR M+D A G  +  TTP EA  +I K
Subjt:  EDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHWISFDQSNFGLTSDDRRMLDSASGCDVLGTTPGEAWEIIAK

A0A1U8KUA0 uncharacterized protein LOC1079193278.7e-0632.29Show/hide
Query:  MSEDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHWISFDQSN---------------FGLTSDDRRMLDSASGCDVLGTTPGEAWEIIA
        + E+  KLR FP+SLQG A+ W++ +P GS ++W  +       +  ++                GLT  DR M+D+ASG  ++  TP +A  +IA
Subjt:  MSEDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHWISFDQSN---------------FGLTSDDRRMLDSASGCDVLGTTPGEAWEIIA

A0A7J0FIA0 Uncharacterized protein4.6e-0738.27Show/hide
Query:  MSEDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHWISFDQSNFGLTSDDRRMLDSASGCDVLGTTPGEAWEIIA
        ++E+  KLR FP+SL+  A+ W++ LPSGS+++W +++S   +       GL   DR M+D+ASG  ++  TP  A  +IA
Subjt:  MSEDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHWISFDQSNFGLTSDDRRMLDSASGCDVLGTTPGEAWEIIA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAAGATCACTTCAAGTTGAGGGTGTTTCCATATTCACTGCAAGGAGGAGCTAGGAAGTGGATTTTCTCACTTCCTTCAGGATCGGTGTCTTCTTGGTTTGATGT
TCAATCGATTCATTGGATTAGTTTTGATCAATCTAATTTTGGATTGACGTCTGACGATAGAAGGATGCTAGACTCAGCTAGTGGCTGTGATGTGCTTGGTACGACACCTG
GTGAAGCGTGGGAGATCATTGCAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGAAGATCACTTCAAGTTGAGGGTGTTTCCATATTCACTGCAAGGAGGAGCTAGGAAGTGGATTTTCTCACTTCCTTCAGGATCGGTGTCTTCTTGGTTTGATGT
TCAATCGATTCATTGGATTAGTTTTGATCAATCTAATTTTGGATTGACGTCTGACGATAGAAGGATGCTAGACTCAGCTAGTGGCTGTGATGTGCTTGGTACGACACCTG
GTGAAGCGTGGGAGATCATTGCAAAATAG
Protein sequenceShow/hide protein sequence
MSEDHFKLRVFPYSLQGGARKWIFSLPSGSVSSWFDVQSIHWISFDQSNFGLTSDDRRMLDSASGCDVLGTTPGEAWEIIAK