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Lag0041584 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041584
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr13:21203854..21204408
RNA-Seq ExpressionLag0041584
SyntenyLag0041584
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_162987262.1 hypothetical protein [Metabacillus litoralis]4.4e-0424.56Show/hide
Query:  MCPWVGERRSDKSPGNMSLYSCWKTCQQQKSKEHVLVLMLKDVAATTVQGTCPCTHAGRRGSNKSPRNMSLYSCWKTWQQQKCKEHVLVLMLEDVSATKV
        MC   G   + K   +  +   WK   +Q  KE + V +L+++    VQG   C   GR G+ KS ++  +    +   +++CKE + V + E+    ++
Subjt:  MCPWVGERRSDKSPGNMSLYSCWKTCQQQKSKEHVLVLMLKDVAATTVQGTCPCTHAGRRGSNKSPRNMSLYSCWKTWQQQKCKEHVLVLMLEDVSATKV

Query:  QGTCPCTHAERRGGNNGVQVGMTS---------------CVLGPGNVVATKVQGTCPCSHAERRDSSNGAQ
        Q    C    R G + G +    S               CV  PG     +VQ    C    R  +S GA+
Subjt:  QGTCPCTHAERRGGNNGVQVGMTS---------------CVLGPGNVVATKVQGTCPCSHAERRDSSNGAQ
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTCCTTGGGTCGGGGAACGTCGTAGCGACAAAAGTCCAGGGAACATGTCCTTGTACTCATGCTGGAAGACGTGTCAACAACAAAAGTCCAAGGAACATGTCCTTGT
ACTCATGTTGAAAGACGTGGCAGCAACAACAGTCCAAGGAACATGTCCTTGTACTCATGCTGGAAGACGTGGCAGCAACAAAAGTCCAAGGAACATGTCCTTGTACTCAT
GCTGGAAGACGTGGCAACAACAAAAGTGCAAGGAACATGTCCTTGTACTCATGCTGGAAGATGTGTCGGCAACAAAAGTCCAAGGAACATGTCCTTGTACTCATGCTGAA
AGACGTGGCGGCAATAATGGAGTCCAAGTGGGAATGACATCATGTGTCCTTGGACCGGGGAACGTCGTAGCAACAAAAGTCCAAGGAACATGTCCTTGTAGTCATGCTGA
AAGACGTGACAGCAGTAATGGAGCCCAAGTGGGAATGACATCATGTGTCCTTGGACCGGGGAACGTCGTAGCAACAAAAGTCCAAAGACGTCAATTGTCCTTGTACTTAT
GTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTCCTTGGGTCGGGGAACGTCGTAGCGACAAAAGTCCAGGGAACATGTCCTTGTACTCATGCTGGAAGACGTGTCAACAACAAAAGTCCAAGGAACATGTCCTTGT
ACTCATGTTGAAAGACGTGGCAGCAACAACAGTCCAAGGAACATGTCCTTGTACTCATGCTGGAAGACGTGGCAGCAACAAAAGTCCAAGGAACATGTCCTTGTACTCAT
GCTGGAAGACGTGGCAACAACAAAAGTGCAAGGAACATGTCCTTGTACTCATGCTGGAAGATGTGTCGGCAACAAAAGTCCAAGGAACATGTCCTTGTACTCATGCTGAA
AGACGTGGCGGCAATAATGGAGTCCAAGTGGGAATGACATCATGTGTCCTTGGACCGGGGAACGTCGTAGCAACAAAAGTCCAAGGAACATGTCCTTGTAGTCATGCTGA
AAGACGTGACAGCAGTAATGGAGCCCAAGTGGGAATGACATCATGTGTCCTTGGACCGGGGAACGTCGTAGCAACAAAAGTCCAAAGACGTCAATTGTCCTTGTACTTAT
GTTGA
Protein sequenceShow/hide protein sequence
MCPWVGERRSDKSPGNMSLYSCWKTCQQQKSKEHVLVLMLKDVAATTVQGTCPCTHAGRRGSNKSPRNMSLYSCWKTWQQQKCKEHVLVLMLEDVSATKVQGTCPCTHAE
RRGGNNGVQVGMTSCVLGPGNVVATKVQGTCPCSHAERRDSSNGAQVGMTSCVLGPGNVVATKVQRRQLSLYLC