; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041589 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041589
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr13:21293502..21294388
RNA-Seq ExpressionLag0041589
SyntenyLag0041589
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065480.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]4.7e-2034.25Show/hide
Query:  MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQRT--------------------------------------FVGHTIDRCYKIHGYPPGYRNQKP
        MGLNDS++ +R Q+LLM+P PSI   FSL+ QE +QR+                                        GH  D+CYK HGYPPGY+ +  
Subjt:  MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQRT--------------------------------------FVGHTIDRCYKIHGYPPGYRNQKP

Query:  NS-------------SKTEAPCPLSSPDSLSSLTPEQCQGLLAILQSHLTKVSTS--TDTSPSTHVAGICSIP--HESSITSLVIDSGASTHICYLKDLF
        NS             + T +     SPD  SSL  EQ   L+ +L +HL   +T+  T  +  TH +GI ++   +  S    +IDSGAS HIC+ K LF
Subjt:  NS-------------SKTEAPCPLSSPDSLSSLTPEQCQGLLAILQSHLTKVSTS--TDTSPSTHVAGICSIP--HESSITSLVIDSGASTHICYLKDLF

Query:  THLKPVSNKSVTLPNKTQI
         +    +N  V LPN  +I
Subjt:  THLKPVSNKSVTLPNKTQI

KAA8523936.1 hypothetical protein F0562_010359 [Nyssa sinensis]8.0e-2034.44Show/hide
Query:  MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQR-------------------------------------------------------TFVGHTID
        MGL+DSFSQ+R QLLLM+P P I R FSLI QE +QR                                                          GHT+D
Subjt:  MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQR-------------------------------------------------------TFVGHTID

Query:  RCYKIHGYPPGYRNQKPNSSKTEAPCPLSSPDSL----------SSLTPEQCQGLLAILQSHL---TKVSTSTDTSPSTHVAGIC----SIPHESSITSL
        RCYKIHGYPPGY+ +  N+    A    +S D L           +L   Q Q L+++L +HL   TKV+ + D S +  +AGIC      P  SS    
Subjt:  RCYKIHGYPPGYRNQKPNSSKTEAPCPLSSPDSL----------SSLTPEQCQGLLAILQSHL---TKVSTSTDTSPSTHVAGIC----SIPHESSITSL

Query:  VIDSGASTHICYLKDLFTHLKPVSNKSVTLPNKTQIKDKFS
        ++DSGA+ HIC     F  L  + +  VTLPN +QI   F+
Subjt:  VIDSGASTHICYLKDLFTHLKPVSNKSVTLPNKTQIKDKFS

RVX21347.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]3.0e-1931.85Show/hide
Query:  MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQRT-------------------------------------------FVGHTIDRCYKIHGYPPGY
        MGLN+SF Q R+Q+L+MEP P I + FSL+ Q+ +QR+                                            +GHT+D+CYK++GYPPGY
Subjt:  MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQRT-------------------------------------------FVGHTIDRCYKIHGYPPGY

Query:  RNQKPN-----------SSKTEAPCPLSSPDSLSSLTPEQCQGLLAILQSHLTKVSTST----DTSPS-THVAGICSI-----PHESSITSLVIDSGAST
        + +  N           S  TEA     SP  L+SL+P QCQ L+A+L S L   + +T       PS +  +GI S+     P+    ++ V+D G + 
Subjt:  RNQKPN-----------SSKTEAPCPLSSPDSLSSLTPEQCQGLLAILQSHLTKVSTST----DTSPS-THVAGICSI-----PHESSITSLVIDSGAST

Query:  HICYLKDLFTHLKPVSNKSVTLPNK-----------------TQIKDKFSLKTIGKADHWQGLYLLKFSS
        H+C     F    P SN SVTLPN                  T   D    K IG       LY+L FSS
Subjt:  HICYLKDLFTHLKPVSNKSVTLPNK-----------------TQIKDKFSLKTIGKADHWQGLYLLKFSS

XP_022867559.1 uncharacterized protein LOC111387248 [Olea europaea var. sylvestris]1.4e-1933.33Show/hide
Query:  MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQRT----------------------------------------------FVGHTIDRCYKIHGYP
        MGL+DSF+Q R+Q+LLM+P P I + F+L+ QE  QRT                                              F GH+I++CYK+HGYP
Subjt:  MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQRT----------------------------------------------FVGHTIDRCYKIHGYP

Query:  PGYRNQKPNSSKTE---APCPLSSPDS--------LSSLTPEQCQGLLAILQSHLTKVSTSTDTSPS-THVAGI----CSIPHESSITSLVIDSGASTHI
        PGY+ ++  S   +   A   L S  S             P+Q   LL +L  HLT   TST+      + AGI     + P+  S    ++DS A+ H+
Subjt:  PGYRNQKPNSSKTE---APCPLSSPDS--------LSSLTPEQCQGLLAILQSHLTKVSTSTDTSPS-THVAGI----CSIPHESSITSLVIDSGASTHI

Query:  CYLKDLFTHLKPVSNKSVTLPNKTQIKDKFS
        C+ + LF  L P+SN   TLPNKT+I+  FS
Subjt:  CYLKDLFTHLKPVSNKSVTLPNKTQIKDKFS

XP_031737360.1 uncharacterized protein LOC116402241 [Cucumis sativus]3.6e-2034.53Show/hide
Query:  MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQRTFVG------------------------------------------------HTIDRCYKIHG
        MGLNDSFSQIRTQLLLMEPEP++Q+ FSL+ QEVEQRT                                                   HT ++CY +HG
Subjt:  MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQRTFVG------------------------------------------------HTIDRCYKIHG

Query:  YPPGYRNQKPNSSKTEAPCPLSSPDSLSSLTPEQCQGLLAILQSHLTKVSTS--TDTSPSTHVAGICSIPHESSITSLVIDSGASTHICYLKDLFTHLKP
        +PPGY+  + + ++     P +  DSLS++  EQCQ LL ILQSHL K+ T     + PS+  A   S        S  +     TH+  ++ L  +LK 
Subjt:  YPPGYRNQKPNSSKTEAPCPLSSPDSLSSLTPEQCQGLLAILQSHLTKVSTS--TDTSPSTHVAGICSIPHESSITSLVIDSGASTHICYLKDLFTHLKP

Query:  VSNKSVTLPNKTQIKDKFSLKTI
          ++ + L      K   S KTI
Subjt:  VSNKSVTLPNKTQIKDKFSLKTI

TrEMBL top hitse value%identityAlignment
A0A151T0D0 Retrovirus-related Pol polyprotein from transposon TNT 1-949.5e-1933.18Show/hide
Query:  MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQR-------------------------------------------TFVGHTIDRCYKIHGYPPGY
        MGLN+SFSQIR Q+LL +P PSI   FSL+ Q+  QR                                             +GHT D CYK+ GYPP Y
Subjt:  MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQR-------------------------------------------TFVGHTIDRCYKIHGYPPGY

Query:  RNQKPNSSKTEAPCPLSSPDSL-----SSLTPEQCQGLLAILQSHLTKVSTSTDTSPSTHVAGIC-SIPHESSITSLVIDSGASTHICYLKDLFTHLKPV
           +  ++  +    + SPD++     S+LTP+QCQ L+  L + + +  T+ D + +T+V GIC ++  +++  + +IDSGA++HIC  K LF     +
Subjt:  RNQKPNSSKTEAPCPLSSPDSL-----SSLTPEQCQGLLAILQSHLTKVSTSTDTSPSTHVAGIC-SIPHESSITSLVIDSGASTHICYLKDLFTHLKPV

Query:  SNKSVTLPNKTQIK
         +  V LPN T++K
Subjt:  SNKSVTLPNKTQIK

A0A438KJI9 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-1931.85Show/hide
Query:  MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQRT-------------------------------------------FVGHTIDRCYKIHGYPPGY
        MGLN+SF Q R+Q+L+MEP P I + FSL+ Q+ +QR+                                            +GHT+D+CYK++GYPPGY
Subjt:  MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQRT-------------------------------------------FVGHTIDRCYKIHGYPPGY

Query:  RNQKPN-----------SSKTEAPCPLSSPDSLSSLTPEQCQGLLAILQSHLTKVSTST----DTSPS-THVAGICSI-----PHESSITSLVIDSGAST
        + +  N           S  TEA     SP  L+SL+P QCQ L+A+L S L   + +T       PS +  +GI S+     P+    ++ V+D G + 
Subjt:  RNQKPN-----------SSKTEAPCPLSSPDSLSSLTPEQCQGLLAILQSHLTKVSTST----DTSPS-THVAGICSI-----PHESSITSLVIDSGAST

Query:  HICYLKDLFTHLKPVSNKSVTLPNK-----------------TQIKDKFSLKTIGKADHWQGLYLLKFSS
        H+C     F    P SN SVTLPN                  T   D    K IG       LY+L FSS
Subjt:  HICYLKDLFTHLKPVSNKSVTLPNK-----------------TQIKDKFSLKTIGKADHWQGLYLLKFSS

A0A5A7VE66 Cysteine-rich RLK (Receptor-like protein kinase) 82.3e-2034.25Show/hide
Query:  MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQRT--------------------------------------FVGHTIDRCYKIHGYPPGYRNQKP
        MGLNDS++ +R Q+LLM+P PSI   FSL+ QE +QR+                                        GH  D+CYK HGYPPGY+ +  
Subjt:  MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQRT--------------------------------------FVGHTIDRCYKIHGYPPGYRNQKP

Query:  NS-------------SKTEAPCPLSSPDSLSSLTPEQCQGLLAILQSHLTKVSTS--TDTSPSTHVAGICSIP--HESSITSLVIDSGASTHICYLKDLF
        NS             + T +     SPD  SSL  EQ   L+ +L +HL   +T+  T  +  TH +GI ++   +  S    +IDSGAS HIC+ K LF
Subjt:  NS-------------SKTEAPCPLSSPDSLSSLTPEQCQGLLAILQSHLTKVSTS--TDTSPSTHVAGICSIP--HESSITSLVIDSGASTHICYLKDLF

Query:  THLKPVSNKSVTLPNKTQI
         +    +N  V LPN  +I
Subjt:  THLKPVSNKSVTLPNKTQI

A0A5J5A1K4 Retrotrans_gag domain-containing protein3.9e-2034.44Show/hide
Query:  MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQR-------------------------------------------------------TFVGHTID
        MGL+DSFSQ+R QLLLM+P P I R FSLI QE +QR                                                          GHT+D
Subjt:  MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQR-------------------------------------------------------TFVGHTID

Query:  RCYKIHGYPPGYRNQKPNSSKTEAPCPLSSPDSL----------SSLTPEQCQGLLAILQSHL---TKVSTSTDTSPSTHVAGIC----SIPHESSITSL
        RCYKIHGYPPGY+ +  N+    A    +S D L           +L   Q Q L+++L +HL   TKV+ + D S +  +AGIC      P  SS    
Subjt:  RCYKIHGYPPGYRNQKPNSSKTEAPCPLSSPDSL----------SSLTPEQCQGLLAILQSHL---TKVSTSTDTSPSTHVAGIC----SIPHESSITSL

Query:  VIDSGASTHICYLKDLFTHLKPVSNKSVTLPNKTQIKDKFS
        ++DSGA+ HIC     F  L  + +  VTLPN +QI   F+
Subjt:  VIDSGASTHICYLKDLFTHLKPVSNKSVTLPNKTQIKDKFS

A0A6J1CIG1 uncharacterized protein LOC1110116693.3e-1938.42Show/hide
Query:  MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQRTFV----------------------------------------------GHTIDRCYKIHGYP
        MGLN+SF+Q+R QLLLMEPE +I RAFSL+ QEVEQRT +                                              GHT+DRCYK+HGYP
Subjt:  MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQRTFV----------------------------------------------GHTIDRCYKIHGYP

Query:  PGYRNQKPN--------------SSKTEAPCPLSSPDSLSSLTPEQCQGLLAILQSHLTKVSTSTDT--SPSTHVAG
        PG+R+   +              S+ T +    S+ DSLS+   +Q QGLL  LQSHL  +  ++D+  S S+HVAG
Subjt:  PGYRNQKPN--------------SSKTEAPCPLSSPDSLSSLTPEQCQGLLAILQSHLTKVSTSTDT--SPSTHVAG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTAAACGACTCCTTCAGTCAAATCAGGACTCAGCTACTTCTTATGGAACCAGAACCGTCCATTCAACGAGCTTTTTCTCTAATCGATCAAGAAGTCGAACAGAG
GACCTTTGTTGGCCACACTATAGATCGCTGTTATAAAATTCACGGATATCCACCAGGATATCGAAACCAGAAACCTAATTCTTCGAAGACAGAAGCCCCTTGTCCTTTGT
CTTCTCCTGATTCACTATCGTCTCTAACACCAGAACAATGCCAAGGACTATTGGCTATTCTCCAAAGCCATCTCACCAAAGTCTCCACTTCCACTGATACTTCACCGTCT
ACCCATGTGGCAGGTATTTGCTCTATTCCTCATGAATCTTCTATCACATCTTTGGTCATTGATTCTGGAGCATCCACACACATATGTTATTTGAAAGATTTGTTTACTCA
CTTGAAGCCAGTTTCAAACAAATCAGTCACCCTGCCAAACAAAACTCAGATTAAGGACAAGTTCTCCTTGAAGACGATTGGAAAGGCTGATCATTGGCAAGGACTTTACC
TGTTGAAATTTAGCTCTCATAAGGACTTTACTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCTAAACGACTCCTTCAGTCAAATCAGGACTCAGCTACTTCTTATGGAACCAGAACCGTCCATTCAACGAGCTTTTTCTCTAATCGATCAAGAAGTCGAACAGAG
GACCTTTGTTGGCCACACTATAGATCGCTGTTATAAAATTCACGGATATCCACCAGGATATCGAAACCAGAAACCTAATTCTTCGAAGACAGAAGCCCCTTGTCCTTTGT
CTTCTCCTGATTCACTATCGTCTCTAACACCAGAACAATGCCAAGGACTATTGGCTATTCTCCAAAGCCATCTCACCAAAGTCTCCACTTCCACTGATACTTCACCGTCT
ACCCATGTGGCAGGTATTTGCTCTATTCCTCATGAATCTTCTATCACATCTTTGGTCATTGATTCTGGAGCATCCACACACATATGTTATTTGAAAGATTTGTTTACTCA
CTTGAAGCCAGTTTCAAACAAATCAGTCACCCTGCCAAACAAAACTCAGATTAAGGACAAGTTCTCCTTGAAGACGATTGGAAAGGCTGATCATTGGCAAGGACTTTACC
TGTTGAAATTTAGCTCTCATAAGGACTTTACTGTTTAG
Protein sequenceShow/hide protein sequence
MGLNDSFSQIRTQLLLMEPEPSIQRAFSLIDQEVEQRTFVGHTIDRCYKIHGYPPGYRNQKPNSSKTEAPCPLSSPDSLSSLTPEQCQGLLAILQSHLTKVSTSTDTSPS
THVAGICSIPHESSITSLVIDSGASTHICYLKDLFTHLKPVSNKSVTLPNKTQIKDKFSLKTIGKADHWQGLYLLKFSSHKDFTV