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Lag0041592 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041592
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr13:21335994..21336668
RNA-Seq ExpressionLag0041592
SyntenyLag0041592
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042506.1 putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H [Cucumis melo var. makuwa]1.3e-0443.48Show/hide
Query:  LIKSNPVLELRSKPV-SISPGTEVEACIHQVQYIS-NPTLKLRSKFSQILVKSNPVLELRSKPVSISPRTEVEVGIHQVQYISNPVLELRSKSSKI----
        L+KS+P L+LRSKPV       E EAC+    +I  +P  K+   FS  LVKS+P L+LR KPV   PR+E EV       +S+P+    S  +K+    
Subjt:  LIKSNPVLELRSKPV-SISPGTEVEACIHQVQYIS-NPTLKLRSKFSQILVKSNPVLELRSKPVSISPRTEVEVGIHQVQYISNPVLELRSKSSKI----

Query:  -LVKSNPYLELRSKP
         LVKS+P L+LR KP
Subjt:  -LVKSNPYLELRSKP
TrEMBL top hitse value%identityAlignment
A0A5A7TKN3 Putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H6.1e-0543.48Show/hide
Query:  LIKSNPVLELRSKPV-SISPGTEVEACIHQVQYIS-NPTLKLRSKFSQILVKSNPVLELRSKPVSISPRTEVEVGIHQVQYISNPVLELRSKSSKI----
        L+KS+P L+LRSKPV       E EAC+    +I  +P  K+   FS  LVKS+P L+LR KPV   PR+E EV       +S+P+    S  +K+    
Subjt:  LIKSNPVLELRSKPV-SISPGTEVEACIHQVQYIS-NPTLKLRSKFSQILVKSNPVLELRSKPVSISPRTEVEVGIHQVQYISNPVLELRSKSSKI----

Query:  -LVKSNPYLELRSKP
         LVKS+P L+LR KP
Subjt:  -LVKSNPYLELRSKP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCGAAGTTTTCTCAAATTTTGATTAAATCGAACCCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATCA
GGTCCAATATATTTCGAACCCAACCCTAAAACTTAGGTCGAAGTTTTCTCAAATTCTGGTTAAATCGAACCCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATCAGTC
CTAGAACTGAGGTCGAAGTCGGTATCCATCAGGTCCAATATATTTCGAACCCAGTCCTAGAGCTGAGGTCAAAATCCTCTAAAATTCTGGTTAAATCGAACCCATACCTG
GAACTGAGGTCGAAGCCTATATCCATCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATCAGGTCCAATATATTTCAAACCCAGCCCTAGAGTCGAGGTCGAAAGTCTT
CTCAAATTATGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCGAAGTTTTCTCAAATTTTGATTAAATCGAACCCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATCA
GGTCCAATATATTTCGAACCCAACCCTAAAACTTAGGTCGAAGTTTTCTCAAATTCTGGTTAAATCGAACCCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATCAGTC
CTAGAACTGAGGTCGAAGTCGGTATCCATCAGGTCCAATATATTTCGAACCCAGTCCTAGAGCTGAGGTCAAAATCCTCTAAAATTCTGGTTAAATCGAACCCATACCTG
GAACTGAGGTCGAAGCCTATATCCATCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATCAGGTCCAATATATTTCAAACCCAGCCCTAGAGTCGAGGTCGAAAGTCTT
CTCAAATTATGGTTAA
Protein sequenceShow/hide protein sequence
MRSKFSQILIKSNPVLELRSKPVSISPGTEVEACIHQVQYISNPTLKLRSKFSQILVKSNPVLELRSKPVSISPRTEVEVGIHQVQYISNPVLELRSKSSKILVKSNPYL
ELRSKPISISPGTEVEACIHQVQYISNPALESRSKVFSNYG