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Lag0041593 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041593
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr13:21370503..21371027
RNA-Seq ExpressionLag0041593
SyntenyLag0041593
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]4.8e-2435.71Show/hide
Query:  MALDDIMNQWENFNLTAEEECTTVEVDRQAAIVTANSMGASLVGKLLAPRIISGKVMRKTFKAAWNIP-NGLIVEKIGANLFLFTLRSEDELARVLRQGT
        MA  +++ +W+NF LT+EE+   V++D  A   T   +  SL+ KLL+ R IS  V++ T K AW +      V+ IG N+FLF      +  R+LR G 
Subjt:  MALDDIMNQWENFNLTAEEECTTVEVDRQAAIVTANSMGASLVGKLLAPRIISGKVMRKTFKAAWNIP-NGLIVEKIGANLFLFTLRSEDELARVLRQGT

Query:  WLFDKHLLVSSKLILMVKPTALEFKYSTFWVHFCELPMDLFNLSMAEHLGNVIGRFEEYDHGGRGVGW
        W FD+ L++    + + KP  ++F+  + WVHF +L +   N +MA  LGN IG FE+ +       W
Subjt:  WLFDKHLLVSSKLILMVKPTALEFKYSTFWVHFCELPMDLFNLSMAEHLGNVIGRFEEYDHGGRGVGW

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]5.1e-2640.24Show/hide
Query:  DDIMNQWENFNLTAEEECTTVEVDRQAAIVTANSMGASLVGKLLAPRIISGKVMRKTFKAAWNIPNGLIVEKIGANLFLFTLRSEDELARVLRQGTWLFD
        ++++  W+ F LT+EE+   ++VD  A  +    +  SLVGKLLA RIIS  V+ +    AW + + L VE IG NLFLF    E ++ RV++ G W FD
Subjt:  DDIMNQWENFNLTAEEECTTVEVDRQAAIVTANSMGASLVGKLLAPRIISGKVMRKTFKAAWNIPNGLIVEKIGANLFLFTLRSEDELARVLRQGTWLFD

Query:  KHLLVSSKLILMVKPTALEFKYSTFWVHFCELPMDLFNLSMAEHLGNVIGRFEEYDHGGRGVGW
        K L+V  K       + LEF    FW+H  +LPM   N +MA  LGN IG F + D   +G  W
Subjt:  KHLLVSSKLILMVKPTALEFKYSTFWVHFCELPMDLFNLSMAEHLGNVIGRFEEYDHGGRGVGW

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.1e-2336.31Show/hide
Query:  MALDDIMNQWENFNLTAEEECTTVEVDRQAAIVTANSMGASLVGKLLAPRIISGKVMRKTFKAAWNIPNGLI-VEKIGANLFLFTLRSEDELARVLRQGT
        MA  D++ +W+NF LT+EEE T ++VD  A   T + +   LVGKL   R I+  VM+ T + AW + N    V+ +G NLFLF+     +  ++ + G 
Subjt:  MALDDIMNQWENFNLTAEEECTTVEVDRQAAIVTANSMGASLVGKLLAPRIISGKVMRKTFKAAWNIPNGLI-VEKIGANLFLFTLRSEDELARVLRQGT

Query:  WLFDKHLLVSSKLILMVKPTALEFKYSTFWVHFCELPMDLFNLSMAEHLGNVIGRFEEYDHGGRGVGW
        W FD+ L++ +K + ++ P+ L+F     WV F +LP+      MA  LGN +G FEE D       W
Subjt:  WLFDKHLLVSSKLILMVKPTALEFKYSTFWVHFCELPMDLFNLSMAEHLGNVIGRFEEYDHGGRGVGW

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]3.5e-1932.74Show/hide
Query:  DDIMNQWENFNLTAEEECTTVEVDRQAAIVTANSMGASLVGKLLAPRIISGKVMRKTFKAAWNIPNGLIVEKIGANLFLFTLRSEDELARVLRQGTWLFD
        D +++     +LT+EE+   V +  ++  +        LVGKLL  R  + + M+ T  + W    G+ V  IG NLF+F      +  RVL  G W FD
Subjt:  DDIMNQWENFNLTAEEECTTVEVDRQAAIVTANSMGASLVGKLLAPRIISGKVMRKTFKAAWNIPNGLIVEKIGANLFLFTLRSEDELARVLRQGTWLFD

Query:  KHLLVSSKLILMVKPTALEFKYSTFWVHFCELPMDLFNLSMAEHLGNVIGRFEEYDHGGRGVGWRRVL
        KHLL+  ++   V+P+ ++     FWVH C LP+ L N  + E +GN +G+F + D+   G+ W R +
Subjt:  KHLLVSSKLILMVKPTALEFKYSTFWVHFCELPMDLFNLSMAEHLGNVIGRFEEYDHGGRGVGWRRVL

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]1.0e-1832.14Show/hide
Query:  DDIMNQWENFNLTAEEECTTVEVDRQAAIVTANSMGASLVGKLLAPRIISGKVMRKTFKAAWNIPNGLIVEKIGANLFLFTLRSEDELARVLRQGTWLFD
        D +++     +LT+EE+   V +   +  +        LVGKLL  R  + + M+ T  + W    G+ V  IG NLF+F      +  RVL  G W FD
Subjt:  DDIMNQWENFNLTAEEECTTVEVDRQAAIVTANSMGASLVGKLLAPRIISGKVMRKTFKAAWNIPNGLIVEKIGANLFLFTLRSEDELARVLRQGTWLFD

Query:  KHLLVSSKLILMVKPTALEFKYSTFWVHFCELPMDLFNLSMAEHLGNVIGRFEEYDHGGRGVGWRRVL
        KHLL+  ++   V+P+ ++     FWVH C LP+ L N  + + +GN +G+F + D+   G+ W R +
Subjt:  KHLLVSSKLILMVKPTALEFKYSTFWVHFCELPMDLFNLSMAEHLGNVIGRFEEYDHGGRGVGWRRVL

TrEMBL top hitse value%identityAlignment
A0A2N9F3Z0 Uncharacterized protein1.6e-1736.64Show/hide
Query:  SLVGKLLAPRIISGKVMRKTFKAAWNIPNGLIVEKIGANLFLFTLRSEDELARVLRQGTWLFDKHLLVSSKLILMVKPTALEFKYSTFWVHFCELPMDLF
        SL+ KLL+ R  +G  +    ++ W  PNG+ + +I  NLF+   + E +L R++ Q  W FDK L+   +L+  ++P  ++F+YS FW+H   LP+   
Subjt:  SLVGKLLAPRIISGKVMRKTFKAAWNIPNGLIVEKIGANLFLFTLRSEDELARVLRQGTWLFDKHLLVSSKLILMVKPTALEFKYSTFWVHFCELPMDLF

Query:  NLSMAEHLGNVIGRFEEYDHGGRGVGWRRVL
           + E +GN IGRF E D    G+GW R L
Subjt:  NLSMAEHLGNVIGRFEEYDHGGRGVGWRRVL

A0A6J1BSZ1 uncharacterized protein LOC1110054812.3e-2435.71Show/hide
Query:  MALDDIMNQWENFNLTAEEECTTVEVDRQAAIVTANSMGASLVGKLLAPRIISGKVMRKTFKAAWNIP-NGLIVEKIGANLFLFTLRSEDELARVLRQGT
        MA  +++ +W+NF LT+EE+   V++D  A   T   +  SL+ KLL+ R IS  V++ T K AW +      V+ IG N+FLF      +  R+LR G 
Subjt:  MALDDIMNQWENFNLTAEEECTTVEVDRQAAIVTANSMGASLVGKLLAPRIISGKVMRKTFKAAWNIP-NGLIVEKIGANLFLFTLRSEDELARVLRQGT

Query:  WLFDKHLLVSSKLILMVKPTALEFKYSTFWVHFCELPMDLFNLSMAEHLGNVIGRFEEYDHGGRGVGW
        W FD+ L++    + + KP  ++F+  + WVHF +L +   N +MA  LGN IG FE+ +       W
Subjt:  WLFDKHLLVSSKLILMVKPTALEFKYSTFWVHFCELPMDLFNLSMAEHLGNVIGRFEEYDHGGRGVGW

A0A6J1D765 uncharacterized protein LOC1110179021.6e-1732.12Show/hide
Query:  LDDIMNQWENFNLTAEEECTTVEVDRQAAIVTANSMGASLVGKLLAPRIISGKVMRKTFKAAWNIPNGLIVEKIGANLFLFTLRSEDELARVLRQGTWLF
        +D+I + WE+F  T +E   TV +DR   I+TA+++   +V KL   + IS + +R   K+ W + N    E +G N+++   +S  E +RVL  G W F
Subjt:  LDDIMNQWENFNLTAEEECTTVEVDRQAAIVTANSMGASLVGKLLAPRIISGKVMRKTFKAAWNIPNGLIVEKIGANLFLFTLRSEDELARVLRQGTWLF

Query:  DKHLLVSSKLILMVKPTALEFKYSTFWVHFCELPMDLFNLSMAEHLGNVIGRFEEYDHGGRGVGW
        +K LLV +      +P  + F +  FW+    +P +  +  MA  LG  +G  EE +  G   GW
Subjt:  DKHLLVSSKLILMVKPTALEFKYSTFWVHFCELPMDLFNLSMAEHLGNVIGRFEEYDHGGRGVGW

A0A6J1DU55 uncharacterized protein LOC1110231352.5e-2640.24Show/hide
Query:  DDIMNQWENFNLTAEEECTTVEVDRQAAIVTANSMGASLVGKLLAPRIISGKVMRKTFKAAWNIPNGLIVEKIGANLFLFTLRSEDELARVLRQGTWLFD
        ++++  W+ F LT+EE+   ++VD  A  +    +  SLVGKLLA RIIS  V+ +    AW + + L VE IG NLFLF    E ++ RV++ G W FD
Subjt:  DDIMNQWENFNLTAEEECTTVEVDRQAAIVTANSMGASLVGKLLAPRIISGKVMRKTFKAAWNIPNGLIVEKIGANLFLFTLRSEDELARVLRQGTWLFD

Query:  KHLLVSSKLILMVKPTALEFKYSTFWVHFCELPMDLFNLSMAEHLGNVIGRFEEYDHGGRGVGW
        K L+V  K       + LEF    FW+H  +LPM   N +MA  LGN IG F + D   +G  W
Subjt:  KHLLVSSKLILMVKPTALEFKYSTFWVHFCELPMDLFNLSMAEHLGNVIGRFEEYDHGGRGVGW

A0A6J1DX30 uncharacterized protein LOC1110248745.1e-2436.31Show/hide
Query:  MALDDIMNQWENFNLTAEEECTTVEVDRQAAIVTANSMGASLVGKLLAPRIISGKVMRKTFKAAWNIPNGLI-VEKIGANLFLFTLRSEDELARVLRQGT
        MA  D++ +W+NF LT+EEE T ++VD  A   T + +   LVGKL   R I+  VM+ T + AW + N    V+ +G NLFLF+     +  ++ + G 
Subjt:  MALDDIMNQWENFNLTAEEECTTVEVDRQAAIVTANSMGASLVGKLLAPRIISGKVMRKTFKAAWNIPNGLI-VEKIGANLFLFTLRSEDELARVLRQGT

Query:  WLFDKHLLVSSKLILMVKPTALEFKYSTFWVHFCELPMDLFNLSMAEHLGNVIGRFEEYDHGGRGVGW
        W FD+ L++ +K + ++ P+ L+F     WV F +LP+      MA  LGN +G FEE D       W
Subjt:  WLFDKHLLVSSKLILMVKPTALEFKYSTFWVHFCELPMDLFNLSMAEHLGNVIGRFEEYDHGGRGVGW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCTTGACGATATCATGAACCAGTGGGAGAACTTTAATCTCACGGCAGAGGAAGAGTGCACGACAGTTGAGGTGGATCGACAGGCCGCTATCGTGACGGCCAATTC
GATGGGTGCTAGTTTGGTCGGGAAATTGTTGGCTCCTCGTATTATTTCAGGCAAGGTTATGCGGAAAACTTTCAAGGCGGCATGGAATATCCCCAATGGCCTGATTGTGG
AAAAAATAGGTGCAAATCTATTTTTGTTCACCCTCCGTTCGGAAGATGAGTTAGCTCGTGTCCTTCGCCAGGGGACTTGGTTATTCGATAAGCATCTTCTTGTATCATCT
AAACTGATTCTGATGGTGAAACCCACTGCATTGGAGTTTAAATACTCCACGTTTTGGGTCCATTTTTGCGAGCTTCCGATGGATTTATTCAACCTATCCATGGCGGAGCA
TTTGGGCAATGTTATTGGCAGATTTGAAGAATATGACCATGGTGGGCGTGGCGTGGGCTGGAGGAGAGTCTTAGGGTGCGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCTTGACGATATCATGAACCAGTGGGAGAACTTTAATCTCACGGCAGAGGAAGAGTGCACGACAGTTGAGGTGGATCGACAGGCCGCTATCGTGACGGCCAATTC
GATGGGTGCTAGTTTGGTCGGGAAATTGTTGGCTCCTCGTATTATTTCAGGCAAGGTTATGCGGAAAACTTTCAAGGCGGCATGGAATATCCCCAATGGCCTGATTGTGG
AAAAAATAGGTGCAAATCTATTTTTGTTCACCCTCCGTTCGGAAGATGAGTTAGCTCGTGTCCTTCGCCAGGGGACTTGGTTATTCGATAAGCATCTTCTTGTATCATCT
AAACTGATTCTGATGGTGAAACCCACTGCATTGGAGTTTAAATACTCCACGTTTTGGGTCCATTTTTGCGAGCTTCCGATGGATTTATTCAACCTATCCATGGCGGAGCA
TTTGGGCAATGTTATTGGCAGATTTGAAGAATATGACCATGGTGGGCGTGGCGTGGGCTGGAGGAGAGTCTTAGGGTGCGAGTAA
Protein sequenceShow/hide protein sequence
MALDDIMNQWENFNLTAEEECTTVEVDRQAAIVTANSMGASLVGKLLAPRIISGKVMRKTFKAAWNIPNGLIVEKIGANLFLFTLRSEDELARVLRQGTWLFDKHLLVSS
KLILMVKPTALEFKYSTFWVHFCELPMDLFNLSMAEHLGNVIGRFEEYDHGGRGVGWRRVLGCE