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Lag0041596 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041596
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZf-CCHC domain-containing protein/UBN2 domain-containing protein
Genome locationchr13:21404793..21407109
RNA-Seq ExpressionLag0041596
SyntenyLag0041596
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046765.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]2.0e-3981.98Show/hide
Query:  EKKKKEKSIALKTISLEVDSEDEDALDEEEVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKAT
        ++ KK+KSIALKTISLEVD EDED LD++++ +LSRKY+NFIKRKK FKKHLS QKESKGEKSKKDEVICYECKK  HI TDCPLLKSSKKSKKKAMKAT
Subjt:  EKKKKEKSIALKTISLEVDSEDEDALDEEEVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKAT

Query:  WDDSEESESGV
        WDDS ESES V
Subjt:  WDDSEESESGV

TYK02592.1 zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]9.8e-3475.68Show/hide
Query:  EKKKKEKSIALKTISLEVDSEDEDALDEEEVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKAT
        ++ KK+KSIAL TISLE+  EDED LDE+++A+ SRKY NFIKRKK FKKHLS QKESKGEK+KKDEVI YECKK G+I TDCP LKSSKKSKKKA+KAT
Subjt:  EKKKKEKSIALKTISLEVDSEDEDALDEEEVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKAT

Query:  WDDSEESESGV
        WDDS +SES V
Subjt:  WDDSEESESGV

TYK29684.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]1.3e-3880.18Show/hide
Query:  EKKKKEKSIALKTISLEVDSEDEDALDEEEVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKAT
        ++ KK+KSIALKTISLEVD EDED LD++++ +LSRKY+NFIK+KK FKKHLS QKESKGEKSKKDEVICYECKK  HI TDCPLLKSSKKSKKK MKAT
Subjt:  EKKKKEKSIALKTISLEVDSEDEDALDEEEVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKAT

Query:  WDDSEESESGV
        WDDS ESES V
Subjt:  WDDSEESESGV

XP_022157467.1 uncharacterized protein LOC111024159 [Momordica charantia]2.8e-4185.45Show/hide
Query:  NEKKKKEKSIALKTISLEVDSEDEDALDEEEVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKA
        +EKKKKEKSIALK I+LEVDS+ E+ALDE++VA+LSRKY+NFIKRKKQFKK+ SNQKESKGEKSKKDEVICY+CKKPGHI TDCPLLKSSKKSKKKAMKA
Subjt:  NEKKKKEKSIALKTISLEVDSEDEDALDEEEVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKA

Query:  TWDDSEESES
        TWDDS+ES S
Subjt:  TWDDSEESES

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]2.4e-4082.88Show/hide
Query:  EKKKKEKSIALKTISLEVDSEDEDALDEEEVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKAT
        ++ KK+KSIALKTISLEVD EDED LDE+++A+ SRKY+NFIKRKK FKKHLS QKESKGEKSKKDEVICYECK+ GHI TDCPLLKSSKKSKKKAMKAT
Subjt:  EKKKKEKSIALKTISLEVDSEDEDALDEEEVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKAT

Query:  WDDSEESESGV
        WDDS ESES V
Subjt:  WDDSEESESGV

TrEMBL top hitse value%identityAlignment
A0A5A7SRY3 Zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-containing protein4.7e-3475.68Show/hide
Query:  EKKKKEKSIALKTISLEVDSEDEDALDEEEVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKAT
        ++ KK+KSIAL TISLE+  EDED LDE+++A+ SRKY NFIKRKK FKKHLS QKESKGEK+KKDEVI YECKK G+I TDCP LKSSKKSKKKA+KAT
Subjt:  EKKKKEKSIALKTISLEVDSEDEDALDEEEVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKAT

Query:  WDDSEESESGV
        WDDS +SES V
Subjt:  WDDSEESESGV

A0A5A7TZF4 Zf-CCHC domain-containing protein/UBN2 domain-containing protein9.8e-4081.98Show/hide
Query:  EKKKKEKSIALKTISLEVDSEDEDALDEEEVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKAT
        ++ KK+KSIALKTISLEVD EDED LD++++ +LSRKY+NFIKRKK FKKHLS QKESKGEKSKKDEVICYECKK  HI TDCPLLKSSKKSKKKAMKAT
Subjt:  EKKKKEKSIALKTISLEVDSEDEDALDEEEVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKAT

Query:  WDDSEESESGV
        WDDS ESES V
Subjt:  WDDSEESESGV

A0A5D3BUV2 Zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-containing protein4.7e-3475.68Show/hide
Query:  EKKKKEKSIALKTISLEVDSEDEDALDEEEVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKAT
        ++ KK+KSIAL TISLE+  EDED LDE+++A+ SRKY NFIKRKK FKKHLS QKESKGEK+KKDEVI YECKK G+I TDCP LKSSKKSKKKA+KAT
Subjt:  EKKKKEKSIALKTISLEVDSEDEDALDEEEVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKAT

Query:  WDDSEESESGV
        WDDS +SES V
Subjt:  WDDSEESESGV

A0A5D3E1G2 Zf-CCHC domain-containing protein/UBN2 domain-containing protein6.4e-3980.18Show/hide
Query:  EKKKKEKSIALKTISLEVDSEDEDALDEEEVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKAT
        ++ KK+KSIALKTISLEVD EDED LD++++ +LSRKY+NFIK+KK FKKHLS QKESKGEKSKKDEVICYECKK  HI TDCPLLKSSKKSKKK MKAT
Subjt:  EKKKKEKSIALKTISLEVDSEDEDALDEEEVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKAT

Query:  WDDSEESESGV
        WDDS ESES V
Subjt:  WDDSEESESGV

A0A6J1DUJ5 uncharacterized protein LOC1110241591.4e-4185.45Show/hide
Query:  NEKKKKEKSIALKTISLEVDSEDEDALDEEEVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKA
        +EKKKKEKSIALK I+LEVDS+ E+ALDE++VA+LSRKY+NFIKRKKQFKK+ SNQKESKGEKSKKDEVICY+CKKPGHI TDCPLLKSSKKSKKKAMKA
Subjt:  NEKKKKEKSIALKTISLEVDSEDEDALDEEEVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKA

Query:  TWDDSEESES
        TWDDS+ES S
Subjt:  TWDDSEESES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCGTTGTTGACACATGAGATGAAGATCAAGAAAAACGTGGAGGATGAGTGTCGCAACGTCATCGCGACGCGAAGTGGCCGACGTCCTTTCCTAAGGGTCTCTTT
CGAGGTTAAAGGTTTGGAGTCGCCACCAATCATCTTGGGGAGCTTTGTTGGAATCAATGGAAAGCGGTGGCACGGTGGCGGCGCCAGTGGTGCGGCGGTGAGCGGCGGCG
ACGGTAGCTTTGGTGTCTACAATGAGAAGAAAAAGAAAGAGAAGAGTATAGCCTTAAAGACCATCTCCTTGGAAGTTGACTCCGAAGATGAGGATGCTCTTGATGAAGAA
GAGGTTGCCTTTCTTTCACGTAAGTATGAGAACTTCATCAAGAGAAAGAAACAATTCAAGAAGCATCTCTCCAACCAAAAAGAGTCAAAAGGTGAAAAGAGCAAAAAGGA
TGAGGTAATATGCTATGAATGCAAGAAACCGGGTCATATTACAACCGATTGTCCTCTTCTCAAATCATCCAAGAAATCCAAGAAGAAAGCAATGAAGGCTACTTGGGATG
ATAGCGAGGAAAGCGAAAGTGGAGTGATAATGAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCGTTGTTGACACATGAGATGAAGATCAAGAAAAACGTGGAGGATGAGTGTCGCAACGTCATCGCGACGCGAAGTGGCCGACGTCCTTTCCTAAGGGTCTCTTT
CGAGGTTAAAGGTTTGGAGTCGCCACCAATCATCTTGGGGAGCTTTGTTGGAATCAATGGAAAGCGGTGGCACGGTGGCGGCGCCAGTGGTGCGGCGGTGAGCGGCGGCG
ACGGTAGCTTTGGTGTCTACAATGAGAAGAAAAAGAAAGAGAAGAGTATAGCCTTAAAGACCATCTCCTTGGAAGTTGACTCCGAAGATGAGGATGCTCTTGATGAAGAA
GAGGTTGCCTTTCTTTCACGTAAGTATGAGAACTTCATCAAGAGAAAGAAACAATTCAAGAAGCATCTCTCCAACCAAAAAGAGTCAAAAGGTGAAAAGAGCAAAAAGGA
TGAGGTAATATGCTATGAATGCAAGAAACCGGGTCATATTACAACCGATTGTCCTCTTCTCAAATCATCCAAGAAATCCAAGAAGAAAGCAATGAAGGCTACTTGGGATG
ATAGCGAGGAAAGCGAAAGTGGAGTGATAATGAAGAAGTGA
Protein sequenceShow/hide protein sequence
MGSLLTHEMKIKKNVEDECRNVIATRSGRRPFLRVSFEVKGLESPPIILGSFVGINGKRWHGGGASGAAVSGGDGSFGVYNEKKKKEKSIALKTISLEVDSEDEDALDEE
EVAFLSRKYENFIKRKKQFKKHLSNQKESKGEKSKKDEVICYECKKPGHITTDCPLLKSSKKSKKKAMKATWDDSEESESGVIMKK