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Lag0041605 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041605
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTobamovirus multiplication 1 homolog
Genome locationchr13:21668164..21669947
RNA-Seq ExpressionLag0041605
SyntenyLag0041605
Gene Ontology termsGO:0005774 - vacuolar membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009457 - THH1/TOM1/TOM3 domain
IPR040226 - THH1/TOM1/TOM3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599855.1 Tobamovirus multiplication protein 3, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4398.91Show/hide
Query:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAF+QAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
Subjt:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

KAG6600798.1 Tobamovirus multiplication protein 3, partial [Cucurbita argyrosperma subsp. sororia]2.4e-4396.74Show/hide
Query:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        MLQRFPVESKGRRKKLQEVGYVTTICFSCFL+RCIMMCFNAF+QAADLDVLDHPVLNFIYY+LVEILPSSLVLFILRKLPPKRGITQYHPIR
Subjt:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

XP_022942344.1 protein TOM THREE HOMOLOG 1 [Cucurbita moschata]2.4e-4396.74Show/hide
Query:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        MLQRFPVESKGRRKKLQEVGYVTTICFSCFL+RCIMMCFNAF+QAADLDVLDHPVLNFIYY+LVEILPSSLVLFILRKLPPKRGITQYHPIR
Subjt:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

XP_022977192.1 protein TOM THREE HOMOLOG 1-like isoform X1 [Cucurbita maxima]1.1e-4398.91Show/hide
Query:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAF+QAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
Subjt:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

XP_023539850.1 tobamovirus multiplication protein 3-like [Cucurbita pepo subsp. pepo]1.1e-4398.91Show/hide
Query:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAF+QAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
Subjt:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

TrEMBL top hitse value%identityAlignment
A0A6J1FNT1 tobamovirus multiplication protein 3-like1.5e-4397.83Show/hide
Query:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAF+QAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPK+GITQYHPIR
Subjt:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

A0A6J1FR16 protein TOM THREE HOMOLOG 11.2e-4396.74Show/hide
Query:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        MLQRFPVESKGRRKKLQEVGYVTTICFSCFL+RCIMMCFNAF+QAADLDVLDHPVLNFIYY+LVEILPSSLVLFILRKLPPKRGITQYHPIR
Subjt:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

A0A6J1IHS8 protein TOM THREE HOMOLOG 1-like isoform X15.3e-4498.91Show/hide
Query:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAF+QAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
Subjt:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

A0A6N2NGM8 Uncharacterized protein1.2e-4397.83Show/hide
Query:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAF++AADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
Subjt:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

A0A6N2NLK2 DUF1084 domain-containing protein1.2e-4397.83Show/hide
Query:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAF++AADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
Subjt:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

SwissProt top hitse value%identityAlignment
Q402F3 Tobamovirus multiplication protein 31.2e-4594.57Show/hide
Query:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        MLQRFPVESKGRRKKLQEVGYVTTICFSCFL+RC+MMCFNAFN+AADLDVLDHP+LN IYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
Subjt:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

Q402F4 Tobamovirus multiplication protein 12.0e-3273.63Show/hide
Query:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPI
        ML+RFP+ESKGRRKKL EVG VT ICF+CFL+ C ++  +AF+  A LDVLDHPVLN IYYLLVEILPS+LVL+ILRKLPPKR   QYHPI
Subjt:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPI

Q948R8 Protein TOM THREE HOMOLOG 11.9e-4391.3Show/hide
Query:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        MLQRFPVESKGRRKKLQEVGYVTTICF+CFL+RCIMMCF+AF+ AADLDVLDHP+LNFIYYLLVEILPSSLVLFILRKLPPKRGITQYH I+
Subjt:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

Q9FEG2 Tobamovirus multiplication protein 19.0e-3370.65Show/hide
Query:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        ML+RFP+ESKGRRKKL EVG VT ICF+CFL+RC+++  +AF++   LDVLDHPVLN IYY++VE+LPS+LVLFILRKLPPKR   QYHPI+
Subjt:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

Q9ZUM2 Tobamovirus multiplication protein 39.6e-4390.22Show/hide
Query:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        MLQRFPVESKGRRKKLQEVGYVTTICF+CFL+RCIMMCF AF++ A+LDVLDHP+LNFIYYLLVEILPSSLVLFILRKLPPKRGITQYH IR
Subjt:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

Arabidopsis top hitse value%identityAlignment
AT1G14530.1 Protein of unknown function (DUF1084)1.4e-4491.3Show/hide
Query:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        MLQRFPVESKGRRKKLQEVGYVTTICF+CFL+RCIMMCF+AF+ AADLDVLDHP+LNFIYYLLVEILPSSLVLFILRKLPPKRGITQYH I+
Subjt:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

AT1G14530.2 Protein of unknown function (DUF1084)1.4e-4491.3Show/hide
Query:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        MLQRFPVESKGRRKKLQEVGYVTTICF+CFL+RCIMMCF+AF+ AADLDVLDHP+LNFIYYLLVEILPSSLVLFILRKLPPKRGITQYH I+
Subjt:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

AT2G02180.1 tobamovirus multiplication protein 36.8e-4490.22Show/hide
Query:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        MLQRFPVESKGRRKKLQEVGYVTTICF+CFL+RCIMMCF AF++ A+LDVLDHP+LNFIYYLLVEILPSSLVLFILRKLPPKRGITQYH IR
Subjt:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

AT4G21790.1 tobamovirus multiplication 16.4e-3470.65Show/hide
Query:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
        ML+RFP+ESKGRRKKL EVG VT ICF+CFL+RC+++  +AF++   LDVLDHPVLN IYY++VE+LPS+LVLFILRKLPPKR   QYHPI+
Subjt:  MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACAGCGCTTTCCCGTGGAATCCAAAGGAAGACGCAAGAAGTTGCAAGAGGTTGGCTATGTGACAACTATATGTTTTTCATGTTTCCTCGTCAGATGCATCATGAT
GTGCTTTAATGCTTTTAATCAAGCTGCAGACCTCGACGTTTTGGATCATCCAGTTCTAAATTTTATATACTACCTGTTGGTTGAGATCTTACCTTCTTCCCTGGTTCTCT
TCATTCTGAGGAAGCTGCCTCCGAAACGAGGAATCACGCAGTACCATCCTATCCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTACAGCGCTTTCCCGTGGAATCCAAAGGAAGACGCAAGAAGTTGCAAGAGGTTGGCTATGTGACAACTATATGTTTTTCATGTTTCCTCGTCAGATGCATCATGAT
GTGCTTTAATGCTTTTAATCAAGCTGCAGACCTCGACGTTTTGGATCATCCAGTTCTAAATTTTATATACTACCTGTTGGTTGAGATCTTACCTTCTTCCCTGGTTCTCT
TCATTCTGAGGAAGCTGCCTCCGAAACGAGGAATCACGCAGTACCATCCTATCCGCTGA
Protein sequenceShow/hide protein sequence
MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFNQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR