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Lag0041611 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041611
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr13:21930326..21930685
RNA-Seq ExpressionLag0041611
SyntenyLag0041611
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON50721.1 hypothetical protein TorRG33x02_313500 [Trema orientale]1.3e-0939.84Show/hide
Query:  GKAPVEQEKSSLEYCKAVTVHHEEETQVAKEDETTKTEELTGEVEEGTTSNEAEKLIPEP-SIHF----PIVL--VPKSKNRKKKNLKAQFNKFLDAFTG
        GK P + E +  ++CKA+T+ +       KE E ++ +E  G++ +     E  K+I +P SI F    PI+   +P  +  +KK L AQF K L+ F  
Subjt:  GKAPVEQEKSSLEYCKAVTVHHEEETQVAKEDETTKTEELTGEVEEGTTSNEAEKLIPEP-SIHF----PIVL--VPKSKNRKKKNLKAQFNKFLDAFTG

Query:  LTVNIPFADALKQMPHYKKFMKE
        L +NIPFADAL+QMP+Y KFMK+
Subjt:  LTVNIPFADALKQMPHYKKFMKE

RVW26218.1 Gag-Pol polyprotein [Vitis vinifera]6.6e-0936.75Show/hide
Query:  KGKAPVEQEKSSLEYCKAVTVHHEEETQVAKEDETTKTEELTGEVEEGTTSNEAEKLIPEPSIHFPIVLVPKSKNRKKKNLKAQFNKFLDAFTGLTVNIP
        +G  P   E +  E+ KA+T+   +E + +KE E    +E T   +E   S   +  IP+PS +     +P  +  KK+NL  QF+KF+D F  L +N+P
Subjt:  KGKAPVEQEKSSLEYCKAVTVHHEEETQVAKEDETTKTEELTGEVEEGTTSNEAEKLIPEPSIHFPIVLVPKSKNRKKKNLKAQFNKFLDAFTGLTVNIP

Query:  FADALKQMPHYKKFMKE
        F D ++QMP Y KF+KE
Subjt:  FADALKQMPHYKKFMKE

XP_024024249.1 uncharacterized protein LOC112092388 [Morus notabilis]3.5e-1036.67Show/hide
Query:  MNKGKAPVEQEKSSLEYCKAVTVHHEEETQVAK-EDETTKTEELTGEVEEGTTSNEAEKLIPEPSIHFPIVLVPKSKNRKKKNLKAQFNKFLDAFTGLTV
        ++ G  P +  K+  E C AVT+  E+E +  K +++ TK +E+  +  + +   ++   +  P +  P   +P  +  KKKN+ AQF+KFL+ F  + +
Subjt:  MNKGKAPVEQEKSSLEYCKAVTVHHEEETQVAK-EDETTKTEELTGEVEEGTTSNEAEKLIPEPSIHFPIVLVPKSKNRKKKNLKAQFNKFLDAFTGLTV

Query:  NIPFADALKQMPHYKKFMKE
        NIPFADAL+QMP+Y KFMK+
Subjt:  NIPFADALKQMPHYKKFMKE

XP_024029937.1 uncharacterized protein LOC112094091 [Morus notabilis]4.6e-1036.97Show/hide
Query:  NKGKAPVEQEKSSLEYCKAVTVHHEEETQVAK-EDETTKTEELTGEVEEGTTSNEAEKLIPEPSIHFPIVLVPKSKNRKKKNLKAQFNKFLDAFTGLTVN
        + GK P + E +S ++CKA+T+   +E +  K +++ TK EE+  E  + +   ++   +  P +  P   +P  +  KKK L AQF+KFL+ F  + +N
Subjt:  NKGKAPVEQEKSSLEYCKAVTVHHEEETQVAK-EDETTKTEELTGEVEEGTTSNEAEKLIPEPSIHFPIVLVPKSKNRKKKNLKAQFNKFLDAFTGLTVN

Query:  IPFADALKQMPHYKKFMKE
        IPF DAL+QMP+Y KFM +
Subjt:  IPFADALKQMPHYKKFMKE

XP_024032903.1 uncharacterized protein LOC112095347 [Morus notabilis]5.1e-0941.13Show/hide
Query:  NKGKAPVEQEKSSLEYCKAVTVHHEEETQVAKEDETTKTEELTGEVEEGTTSNEAEKLIPEPSIHFP------IVLVPKSKNRKKKNLKAQFNKFLDAFT
        + GK P + E +  ++CKA+T+   +E +  K  E  KTEE     EE  T    E   P+ SI FP         +P  +  KKK L AQF KFL+ F 
Subjt:  NKGKAPVEQEKSSLEYCKAVTVHHEEETQVAKEDETTKTEELTGEVEEGTTSNEAEKLIPEPSIHFP------IVLVPKSKNRKKKNLKAQFNKFLDAFT

Query:  GLTVNIPFADALKQMPHYKKFMKE
         + +NIPF DAL+QMP+Y KFMK+
Subjt:  GLTVNIPFADALKQMPHYKKFMKE

TrEMBL top hitse value%identityAlignment
A0A151RWF6 Uncharacterized protein4.6e-0836.36Show/hide
Query:  MNKGKAPVEQEKSSLEY--CKAVTVHHEEETQVAKEDETTKTEELTGEVEEGTTSNEAEKLIPEPSIHFPIVLVPKSKNRKKKNLKAQFNKFLDAFTGLT
        + + K   ++EKS +E+   K V ++ E E     E E+ K E   G+V+EG+     E + P P  + P    P  K++++     QF +FLD    L 
Subjt:  MNKGKAPVEQEKSSLEY--CKAVTVHHEEETQVAKEDETTKTEELTGEVEEGTTSNEAEKLIPEPSIHFPIVLVPKSKNRKKKNLKAQFNKFLDAFTGLT

Query:  VNIPFADALKQMPHYKKFMKE
        +NIPFA+AL+QMP Y +FMKE
Subjt:  VNIPFADALKQMPHYKKFMKE

A0A2P5BPI6 Uncharacterized protein6.4e-1039.84Show/hide
Query:  GKAPVEQEKSSLEYCKAVTVHHEEETQVAKEDETTKTEELTGEVEEGTTSNEAEKLIPEP-SIHF----PIVL--VPKSKNRKKKNLKAQFNKFLDAFTG
        GK P + E +  ++CKA+T+ +       KE E ++ +E  G++ +     E  K+I +P SI F    PI+   +P  +  +KK L AQF K L+ F  
Subjt:  GKAPVEQEKSSLEYCKAVTVHHEEETQVAKEDETTKTEELTGEVEEGTTSNEAEKLIPEP-SIHF----PIVL--VPKSKNRKKKNLKAQFNKFLDAFTG

Query:  LTVNIPFADALKQMPHYKKFMKE
        L +NIPFADAL+QMP+Y KFMK+
Subjt:  LTVNIPFADALKQMPHYKKFMKE

A0A438CSP7 Gag-Pol polyprotein3.2e-0936.75Show/hide
Query:  KGKAPVEQEKSSLEYCKAVTVHHEEETQVAKEDETTKTEELTGEVEEGTTSNEAEKLIPEPSIHFPIVLVPKSKNRKKKNLKAQFNKFLDAFTGLTVNIP
        +G  P   E +  E+ KA+T+   +E + +KE E    +E T   +E   S   +  IP+PS +     +P  +  KK+NL  QF+KF+D F  L +N+P
Subjt:  KGKAPVEQEKSSLEYCKAVTVHHEEETQVAKEDETTKTEELTGEVEEGTTSNEAEKLIPEPSIHFPIVLVPKSKNRKKKNLKAQFNKFLDAFTGLTVNIP

Query:  FADALKQMPHYKKFMKE
        F D ++QMP Y KF+KE
Subjt:  FADALKQMPHYKKFMKE

A0A438ICP9 Pro-Pol polyprotein2.3e-0733.61Show/hide
Query:  MNKGKAPVEQEKSSLEYCKAVTVHHEEETQVAKEDETTKTEELTGEVEEGTTSNEAEKLIPEPSIHFPIVLVPKSKNRKKKNLKAQFNKFLDAFTGLTVN
        + +G  P   +    ++ K +T+   EE + +KE E    +E T   +E   S   +  IP+PS +     +P  +  KK+NL  QF+KF+D F  L +N
Subjt:  MNKGKAPVEQEKSSLEYCKAVTVHHEEETQVAKEDETTKTEELTGEVEEGTTSNEAEKLIPEPSIHFPIVLVPKSKNRKKKNLKAQFNKFLDAFTGLTVN

Query:  IPFADALKQMPHYKKFMKE
        +PF D L+Q+  Y KF+KE
Subjt:  IPFADALKQMPHYKKFMKE

A0A6J1DTZ8 uncharacterized protein LOC1110239791.6e-0837.88Show/hide
Query:  MNKGKAPVEQEKSSLEYCKAVTVHHEEETQ-------------VAKEDETTKTEELTGEVEEGTTSNEAEKLIPEPSIHFPIVLVPKSKNRKKKNLKAQF
        M KG+ P   E + +EYCKAVT+    + Q             + K+D + +T      V+E   + EAEK      + F + L    +  +KK + AQF
Subjt:  MNKGKAPVEQEKSSLEYCKAVTVHHEEETQ-------------VAKEDETTKTEELTGEVEEGTTSNEAEKLIPEPSIHFPIVLVPKSKNRKKKNLKAQF

Query:  NKFLDAFTGLTVNIPFADALKQMPHYKKFMKE
         KFLD F  L +NI FA+AL+QMP+Y KFMKE
Subjt:  NKFLDAFTGLTVNIPFADALKQMPHYKKFMKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAAAGGTAAAGCCCCAGTTGAACAGGAGAAATCTTCATTGGAGTACTGCAAGGCCGTCACTGTGCATCACGAGGAGGAGACTCAAGTAGCTAAGGAGGATGAAAC
TACTAAAACTGAGGAACTCACTGGAGAAGTTGAGGAGGGTACCACCTCAAACGAAGCTGAAAAGCTTATACCTGAGCCCTCTATCCATTTTCCTATTGTTTTAGTTCCTA
AGTCAAAGAATAGGAAAAAGAAAAATTTGAAGGCTCAGTTTAATAAGTTTCTTGATGCTTTTACAGGGTTGACTGTTAATATTCCTTTTGCAGATGCATTGAAGCAGATG
CCTCATTATAAGAAGTTCATGAAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATAAAGGTAAAGCCCCAGTTGAACAGGAGAAATCTTCATTGGAGTACTGCAAGGCCGTCACTGTGCATCACGAGGAGGAGACTCAAGTAGCTAAGGAGGATGAAAC
TACTAAAACTGAGGAACTCACTGGAGAAGTTGAGGAGGGTACCACCTCAAACGAAGCTGAAAAGCTTATACCTGAGCCCTCTATCCATTTTCCTATTGTTTTAGTTCCTA
AGTCAAAGAATAGGAAAAAGAAAAATTTGAAGGCTCAGTTTAATAAGTTTCTTGATGCTTTTACAGGGTTGACTGTTAATATTCCTTTTGCAGATGCATTGAAGCAGATG
CCTCATTATAAGAAGTTCATGAAGGAATGA
Protein sequenceShow/hide protein sequence
MNKGKAPVEQEKSSLEYCKAVTVHHEEETQVAKEDETTKTEELTGEVEEGTTSNEAEKLIPEPSIHFPIVLVPKSKNRKKKNLKAQFNKFLDAFTGLTVNIPFADALKQM
PHYKKFMKE