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Lag0041655 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041655
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr13:23209383..23211997
RNA-Seq ExpressionLag0041655
SyntenyLag0041655
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_012853091.1 PREDICTED: uncharacterized protein LOC105972661 [Erythranthe guttata]6.5e-1867.57Show/hide
Query:  MYKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQD---EKMGDVQGE
        +YKEKTK WHDKKI  +EF KGQ VLLYNSRLKLFPGKLKS+WSGPF +++VFP+GA+ L D   EK   V G+
Subjt:  MYKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQD---EKMGDVQGE

XP_023521407.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785222 [Cucurbita pepo subsp. pepo]1.7e-1871.23Show/hide
Query:  MYKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQDEKMGDVQGEWT
        MYKEKTK+WHD KI+ KEF KGQ+VLL+NSRLKLFPGKLKS+WSGPFIV EV P GAIT+   K GD +  +T
Subjt:  MYKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQDEKMGDVQGEWT

XP_023522102.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785979 [Cucurbita pepo subsp. pepo]1.7e-1871.23Show/hide
Query:  MYKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQDEKMGDVQGEWT
        MYKEKTK+WHD KI+ KEF KGQ+VLL+NSRLKLFPGKLKS+WSGPFIV EV P GAIT+   K GD +  +T
Subjt:  MYKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQDEKMGDVQGEWT

XP_024019127.1 uncharacterized protein LOC112090925 [Morus notabilis]2.6e-1974.24Show/hide
Query:  MYKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQDEKMG
        +YKEKTK WHDK+IK +EF  GQ+VLLYNSRLKLFPGKLKS+WSGPF V  VFP+GA+ LQ+EK G
Subjt:  MYKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQDEKMG

XP_024028687.1 uncharacterized protein LOC112093776 [Morus notabilis]7.7e-1972.73Show/hide
Query:  MYKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQDEKMG
        +YKEKTK WHDK+IK +EF  GQ+VLLYNSRLKLFPGKLKS+WSGPF V  VFP+G + LQ+EK G
Subjt:  MYKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQDEKMG

TrEMBL top hitse value%identityAlignment
A0A1J3J772 Reverse transcriptase (Fragment)7.7e-1770.15Show/hide
Query:  MYKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQDEKMGD
        +YKE+TK +HDK+IKSKEF  G +VLLYNSRLKLFPGKLKS+WSGPF V EV P GA+TL ++  GD
Subjt:  MYKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQDEKMGD

A0A1S3V0F3 uncharacterized protein LOC1067703727.7e-1760.56Show/hide
Query:  YKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQDEKMGDVQGEW
        YKEK K +HDKK+  ++F  GQ+VLL+NSRLKLFPGKLKSKWSGPF++  V+PNGA+ L+     D Q +W
Subjt:  YKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQDEKMGDVQGEW

A0A1U7WNX7 uncharacterized protein LOC1042257851.3e-1670.97Show/hide
Query:  MYKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQD
        +YKEKTK WHDK I+ +EF  GQ+VLL+NSRLKLFPGKLKS+WSGPFIV+ V P+GA+ L+D
Subjt:  MYKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQD

A0A2G9HK33 Reverse transcriptase1.3e-1669.84Show/hide
Query:  MYKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQDE
        +YKEKTK WHDKKI  + F  GQ VLL+NSRLKLFPGKLKS+WSGPF + EVFP+GA+ L++E
Subjt:  MYKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQDE

A0A3Q7XQS1 LOW QUALITY PROTEIN: uncharacterized protein LOC1137841291.2e-1775.81Show/hide
Query:  MYKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQD
        +YKEKTK WHDKKIK KEF +G+ VLL+NSRLKLFPGKLKSKWSGPF V +VFP+GA+ L+D
Subjt:  MYKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAAGGAGAAGACTAAGCTGTGGCATGACAAAAAAATTAAATCTAAGGAGTTTGTCAAGGGTCAGAAAGTTTTGCTTTATAATTCTAGATTAAAATTATTTCCTGG
AAAATTAAAATCTAAATGGTCAGGACCGTTTATTGTGATTGAGGTTTTTCCCAATGGAGCAATTACTTTGCAGGATGAAAAGATGGGAGATGTTCAAGGTGAATGGACAG
CGTGTGAAGCATTATTGGGGATTGAGGATTGTTGCGGCAAAGATATTGCTGGAGCAAAATATGCCGAGTTAGAAGGGTTTCTGTTGGAATTTATTATTGTTACCGTTGGA
TTTAACTTTGAATTCTTGCAGGTAAATGTGCGTGCGCTTCTGATGAGGCCACGTGTCCAGAGCAATTATCCAAAGGCTTCAATGATGACAGCACGTCGATTTTACCATGG
GCGTTTGGAATCCGAAATTTTACCGTTGGTAATTTTTGAATTTCAGGAGACTCATGTTGAAATCATATGCCGGACCACCAAAGCGCCGCCGCATCAAGAGGAAGGCGGGC
GCGTGAAGGTGGTTCGGAACACGCCATCACCTCCGACGTCGGACTCTGAGAAAGAAAAAGGGAAGCTAAGAATAAGGAAAAAGAAGAAGAGGCGAGAAGGCAGAGGAAGA
GCGTTTGCGCATCCAGAGAGAAAGCAGGGGCAAAGGAATTGCGAAGCATCAGGAGAAATTGAGGAGCCGAGGGCGCCATTCATTCGCTTCGTCAACGATCTTGCCCGAGC
AAAATACCAGGAGGTACTGAAACGGGACTTCTTGTTCGAACGTGGATTTGGCAATGATTTACCTAGGTTTTTGGAGGCTGGAATAGTGAACCTCGGTTGGAGGCAATTTT
GTGCGAAGCCAGAACCTGTGAATGCCAACATTGTTCGAGAATTTTACGCCAACCTTGACATTAAGAATGATTTTGAGGTCATCGTCGAGGAGTGCCTAGTGAAGCCAACA
CTTGGATGGGTTTCATCAGGCTACGCTTGCTGCCGACAACACACGACTCCACGGTATCTCGGGACAGGGTATTGCTTGCTTTGCATTCTTCGCTCGATGAGTATAGATGT
AGGAAAGATAATTTCTTCTGAGATTGTTGATTGCTGGAAGAAGAAGGTGGGGAAGCTGTTCTTTCCGAACACTATCACGATGTTATGCAGCAGGGCAGGAGTGCCCACGG
TTCCAGAAGATATGATCATGACTGATAAGGGAATCATTGACACACCTAATCTGGTGCGGCTTCAGCGTATGCAAGAGGTTCGCCAGGGTGGGCTTGTGTATGGCGTCAAT
CAAATCCTAGAGCAACTATCAGTGTTGACCAGTAGGTTAGAGTTTGCTGAAAGGCAAGCTCAGACCTACTGGACTTATGCTAAAAGGAGAGATGATGCGCTAAGGGGGGC
CTTGCAAAGCAATTTCTCAAACCGTATCAGGCCTTCCCATGTTTCCCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTATAAGGAGAAGACTAAGCTGTGGCATGACAAAAAAATTAAATCTAAGGAGTTTGTCAAGGGTCAGAAAGTTTTGCTTTATAATTCTAGATTAAAATTATTTCCTGG
AAAATTAAAATCTAAATGGTCAGGACCGTTTATTGTGATTGAGGTTTTTCCCAATGGAGCAATTACTTTGCAGGATGAAAAGATGGGAGATGTTCAAGGTGAATGGACAG
CGTGTGAAGCATTATTGGGGATTGAGGATTGTTGCGGCAAAGATATTGCTGGAGCAAAATATGCCGAGTTAGAAGGGTTTCTGTTGGAATTTATTATTGTTACCGTTGGA
TTTAACTTTGAATTCTTGCAGGTAAATGTGCGTGCGCTTCTGATGAGGCCACGTGTCCAGAGCAATTATCCAAAGGCTTCAATGATGACAGCACGTCGATTTTACCATGG
GCGTTTGGAATCCGAAATTTTACCGTTGGTAATTTTTGAATTTCAGGAGACTCATGTTGAAATCATATGCCGGACCACCAAAGCGCCGCCGCATCAAGAGGAAGGCGGGC
GCGTGAAGGTGGTTCGGAACACGCCATCACCTCCGACGTCGGACTCTGAGAAAGAAAAAGGGAAGCTAAGAATAAGGAAAAAGAAGAAGAGGCGAGAAGGCAGAGGAAGA
GCGTTTGCGCATCCAGAGAGAAAGCAGGGGCAAAGGAATTGCGAAGCATCAGGAGAAATTGAGGAGCCGAGGGCGCCATTCATTCGCTTCGTCAACGATCTTGCCCGAGC
AAAATACCAGGAGGTACTGAAACGGGACTTCTTGTTCGAACGTGGATTTGGCAATGATTTACCTAGGTTTTTGGAGGCTGGAATAGTGAACCTCGGTTGGAGGCAATTTT
GTGCGAAGCCAGAACCTGTGAATGCCAACATTGTTCGAGAATTTTACGCCAACCTTGACATTAAGAATGATTTTGAGGTCATCGTCGAGGAGTGCCTAGTGAAGCCAACA
CTTGGATGGGTTTCATCAGGCTACGCTTGCTGCCGACAACACACGACTCCACGGTATCTCGGGACAGGGTATTGCTTGCTTTGCATTCTTCGCTCGATGAGTATAGATGT
AGGAAAGATAATTTCTTCTGAGATTGTTGATTGCTGGAAGAAGAAGGTGGGGAAGCTGTTCTTTCCGAACACTATCACGATGTTATGCAGCAGGGCAGGAGTGCCCACGG
TTCCAGAAGATATGATCATGACTGATAAGGGAATCATTGACACACCTAATCTGGTGCGGCTTCAGCGTATGCAAGAGGTTCGCCAGGGTGGGCTTGTGTATGGCGTCAAT
CAAATCCTAGAGCAACTATCAGTGTTGACCAGTAGGTTAGAGTTTGCTGAAAGGCAAGCTCAGACCTACTGGACTTATGCTAAAAGGAGAGATGATGCGCTAAGGGGGGC
CTTGCAAAGCAATTTCTCAAACCGTATCAGGCCTTCCCATGTTTCCCGATGA
Protein sequenceShow/hide protein sequence
MYKEKTKLWHDKKIKSKEFVKGQKVLLYNSRLKLFPGKLKSKWSGPFIVIEVFPNGAITLQDEKMGDVQGEWTACEALLGIEDCCGKDIAGAKYAELEGFLLEFIIVTVG
FNFEFLQVNVRALLMRPRVQSNYPKASMMTARRFYHGRLESEILPLVIFEFQETHVEIICRTTKAPPHQEEGGRVKVVRNTPSPPTSDSEKEKGKLRIRKKKKRREGRGR
AFAHPERKQGQRNCEASGEIEEPRAPFIRFVNDLARAKYQEVLKRDFLFERGFGNDLPRFLEAGIVNLGWRQFCAKPEPVNANIVREFYANLDIKNDFEVIVEECLVKPT
LGWVSSGYACCRQHTTPRYLGTGYCLLCILRSMSIDVGKIISSEIVDCWKKKVGKLFFPNTITMLCSRAGVPTVPEDMIMTDKGIIDTPNLVRLQRMQEVRQGGLVYGVN
QILEQLSVLTSRLEFAERQAQTYWTYAKRRDDALRGALQSNFSNRIRPSHVSR