; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041661 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041661
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr13:23500300..23501441
RNA-Seq ExpressionLag0041661
SyntenyLag0041661
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006484927.1 uncharacterized protein LOC102626623 [Citrus sinensis]2.7e-2027.49Show/hide
Query:  ETEEIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRKLENALLCKILTNKKINPE------------------------------VNSRIKGWIKEAGPWF
        +TEE+I+  + + + +EE  +V  +   + D  +R   + L+ KIL N+ +N E                                 + K  +   GPW 
Subjt:  ETEEIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRKLENALLCKILTNKKINPE------------------------------VNSRIKGWIKEAGPWF

Query:  YDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGDCS---LRSKTKKPDKWI-----KG--------
        +DKA++++ +P G        F + SFWV  H +P+ C  + +  ++G  +G+VE+++ DEE E  G  +   +     KP K I     +G        
Subjt:  YDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGDCS---LRSKTKKPDKWI-----KG--------

Query:  SYEKLPDFCYGCGLLGHTIKECDQAKDATEETLPYGSWLREPTRLKVQEPS
         Y++LPDFC+ CGL+GH  +EC Q K   +E L YG W++  T  ++ + S
Subjt:  SYEKLPDFCYGCGLLGHTIKECDQAKDATEETLPYGSWLREPTRLKVQEPS

XP_024033132.1 uncharacterized protein LOC112095437 [Citrus clementina]2.7e-2027.08Show/hide
Query:  ETEEIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRKLENALLCKILTNKKINPE------------------------------VNSRIKGWIKEAGPWF
        ETEE+I+  +A+ + E E+   F       +   + +   L+ KIL  + +N E                              ++   K  +   GPW 
Subjt:  ETEEIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRKLENALLCKILTNKKINPE------------------------------VNSRIKGWIKEAGPWF

Query:  YDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGD-------CSLRSKTKK---------PDKWIKG
        +D+A++++++P+G        F +VSFW+  H +PL C   +   E+GS +GKVE + +D + E +G+        ++    KK          D  +  
Subjt:  YDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGD-------CSLRSKTKK---------PDKWIKG

Query:  SYEKLPDFCYGCGLLGHTIKECDQAKDATEETLPYGSWLR
         YE+LPDFC+ CG +GH  +EC + K   +E LP+G WL+
Subjt:  SYEKLPDFCYGCGLLGHTIKECDQAKDATEETLPYGSWLR

XP_024036938.1 uncharacterized protein LOC112096937 [Citrus clementina]1.6e-2027.7Show/hide
Query:  ETEEIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRK---LENALLCKILTNKKINPE------------------------------VNSRIKGWIKEAG
        +TEE+I+  +A+ + EE+K  +      EV+L ++K   +   L+ K+L  K +N E                                   K  + + G
Subjt:  ETEEIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRK---LENALLCKILTNKKINPE------------------------------VNSRIKGWIKEAG

Query:  PWFYDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGDCSLRSKTKKPDKWIKGSYEKLPDFCYGCG
        PW +D+A+ ++ +PRG        F + SFWV    + LAC  ++   ++G  +G VE     E LE+        +T  P   I   YE LPDFCY CG
Subjt:  PWFYDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGDCSLRSKTKKPDKWIKGSYEKLPDFCYGCG

Query:  LLGHTIKECDQAKDATEETLPYGSWLREPT----RLKVQEPSYWFFNGGRGRIGERGRGSWRQLNIEEDSYTSSE---SNLVLPSEKTIDGGKENS
        ++GH  KEC + +D   E LPYGSW++  T      + Q    W  N G G+  E+   S      ++          +N  +PSEK +    E++
Subjt:  LLGHTIKECDQAKDATEETLPYGSWLREPT----RLKVQEPSYWFFNGGRGRIGERGRGSWRQLNIEEDSYTSSE---SNLVLPSEKTIDGGKENS

XP_024042073.1 uncharacterized protein LOC112099188 [Citrus clementina]1.5e-2127.08Show/hide
Query:  ETEEIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRKLENALLCKILTNKKINPE------------------------------VNSRIKGWIKEAGPWF
        +TEE+I+  +A+ + EE+K S   L  +  D  ++ L   L+ KI+ ++ +N E                                   K  +   GPW 
Subjt:  ETEEIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRKLENALLCKILTNKKINPE------------------------------VNSRIKGWIKEAGPWF

Query:  YDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGDCS---LRSKTKKPDKWI-----KGS-------
        +D+A++++ KP+G       DF ++ FWV  H +P+AC  R+   E+G ++ KVE+++ DE  + +G+ +   +     +P K I     +G        
Subjt:  YDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGDCS---LRSKTKKPDKWI-----KGS-------

Query:  -YEKLPDFCYGCGLLGHTIKECDQAKDATEETLPYGSWLR
         YE+LPDFC+ CG++ H  KEC Q +   +E   +G W++
Subjt:  -YEKLPDFCYGCGLLGHTIKECDQAKDATEETLPYGSWLR

XP_024045326.1 uncharacterized protein LOC112100347 [Citrus clementina]9.4e-2130Show/hide
Query:  ETEEIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRKLENALLCKILTNKKINPE-VNSRIK------GWIK-----------------------EAGPWF
        ETEE+I+   A+ + EEE+  V      +    ++     L+ KIL+ + I+ E V + ++      G IK                         GPW 
Subjt:  ETEEIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRKLENALLCKILTNKKINPE-VNSRIK------GWIK-----------------------EAGPWF

Query:  YDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGDC---------------SLRSKTKKPDKWIKG-
        +D+A++++E+P+G     D  F +VSFWV  H +PL C   N+  E+GS +G+VE +  DE  + +G+                 LR + +  ++ + G 
Subjt:  YDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGDC---------------SLRSKTKKPDKWIKG-

Query:  SYEKLPDFCYGCGLLGHTIKECDQAKDATEETLPYGSWLR
         YEKLPD+C+ C  +GH  +EC Q K   +E+L YG+WL+
Subjt:  SYEKLPDFCYGCGLLGHTIKECDQAKDATEETLPYGSWLR

TrEMBL top hitse value%identityAlignment
A0A1S8AC25 CCHC-type domain-containing protein (Fragment)1.7e-2028.16Show/hide
Query:  ETEEIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRKLENALLCKILTNKKINPE-----------------------------VNSRI-KGWIKEAGPWF
        + EE+IK  RA+++++EE   V      +++  ++ L   L+ K+L  ++++ E                               S + K  I   GPW 
Subjt:  ETEEIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRKLENALLCKILTNKKINPE-----------------------------VNSRI-KGWIKEAGPWF

Query:  YDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGD---CSLRSKTKKPDKWI---------------
        +D+A++ + +P G       DF +VSFWV  H +P+ C S++ A E+G ++GKVE+++ D   E +G      +     KP K I               
Subjt:  YDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGD---CSLRSKTKKPDKWI---------------

Query:  KGSYEKLPDFCYGCGLLGHTIKECDQAKDATEETLPYGSWLREPT
        +  YE+LPDFC+ CG +GH  +EC   K  +++ L YG WL+  T
Subjt:  KGSYEKLPDFCYGCGLLGHTIKECDQAKDATEETLPYGSWLREPT

A0A5C7H9Y2 CCHC-type domain-containing protein5.1e-2033.12Show/hide
Query:  IKEAGPWFYDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGD-------CSLRSKTKKPDKWIKGS
        I E GPW +DK +L++ +  G     DL FRYV FW+  H LPLAC +R   + +G L+G+V+++D  E  E  G          + +  K+  +   G 
Subjt:  IKEAGPWFYDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGD-------CSLRSKTKKPDKWIKGS

Query:  ----------YEKLPDFCYGCGLLGHTIKECD-QAKDAT-EETLPYGSWLREPTRLK
                  YE+LP+FCY CG +GH +++C    K+ T   +  +G W+R  +R +
Subjt:  ----------YEKLPDFCYGCGLLGHTIKECD-QAKDAT-EETLPYGSWLREPTRLK

A0A5C7HVU6 CCHC-type domain-containing protein2.3e-2031.94Show/hide
Query:  VNSRIKGWIKEAGPWFYDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLD-------LDEELEQYGDCSLRSKTKK
        VNS  K  +   GPW ++ +++ +E+PRG     +L+F  VSFWV  H LPL C ++ + + +G +LG+VE++D       LD+ L    +  +    K+
Subjt:  VNSRIKGWIKEAGPWFYDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLD-------LDEELEQYGDCSLRSKTKK

Query:  PDK-WIKGS---------YEKLPDFCYGCGLLGHTIKECDQAKDATEETLP--YGSWLREPTRLKVQEPSYWFFNGGRGRIGERGRGSWRQLNIEEDSYT
          K  ++GS         YE LP+ C+ CG+LGH ++EC   + + EE  P  YG+W+R  T +  +EP      G R R       S  + N+ E   T
Subjt:  PDK-WIKGS---------YEKLPDFCYGCGLLGHTIKECDQAKDATEETLP--YGSWLREPTRLKVQEPSYWFFNGGRGRIGERGRGSWRQLNIEEDSYT

Query:  SS-ESNLVLPSEKTID
        S  +   VLP    ++
Subjt:  SS-ESNLVLPSEKTID

A0A5C7IJL6 CCHC-type domain-containing protein5.1e-2029.87Show/hide
Query:  EIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRKLENALLCKILTNKKINPEVNSRIKGWIKEAGPWFYDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHK
        EI K    L + +E+   +    ED   +    + + L+ K+L+ K++N E            GPW +DK +L++EKP G      L F    FWV  H 
Subjt:  EIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRKLENALLCKILTNKKINPEVNSRIKGWIKEAGPWFYDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHK

Query:  LPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGDCSLRSK-----TKKPDKWIKGS-------------YEKLPDFCYGCGLLGHTIKEC---DQAKDA
        +P+ C +R  A  +   +G+V  +++  E  +     LR K     T+   +W++ S             YE+LP+FCY CG LGH + EC   +  K+A
Subjt:  LPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGDCSLRSK-----TKKPDKWIKGS-------------YEKLPDFCYGCGLLGHTIKEC---DQAKDA

Query:  TEETLP-YGSWLREPTRLKVQEPSYWFFNGG
         E + P +GSW+R  +  K +E S    +GG
Subjt:  TEETLP-YGSWLREPTRLKVQEPSYWFFNGG

A0A6J1D765 uncharacterized protein LOC1110179021.7e-2031.44Show/hide
Query:  KGWIKEAGPWFYDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGDCSLRSKTK----KP-------
        K  +  +GPW ++K++L++  P   +   D++F + +FW+  H +P  C S   A  +G+ LG VE+++ D   + +    +R + K    KP       
Subjt:  KGWIKEAGPWFYDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGDCSLRSKTK----KP-------

Query:  ------DKWIKGSYEKLPDFCYGCGLLGHTIKECDQAKDATEETLP--YGSWLREPTRLK----VQEPSYW----FFNGGRGRIGERGRGSWRQ
              D W    YEKLPDFCY CG +GH+ +EC+Q         P  YG WLR     K     +E  +W    F  G +   G  GRG WR+
Subjt:  ------DKWIKGSYEKLPDFCYGCGLLGHTIKECDQAKDATEETLP--YGSWLREPTRLK----VQEPSYW----FFNGGRGRIGERGRGSWRQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding4.4e-0825.44Show/hide
Query:  IKEAGPWFYDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGDCSLRSKTKKPDKWIKGSYEKLPDF
        I   GPW ++  M +++  R      D +F+ + FW+    +PL   +      IG  +G   + +L  ++                  +K  YEKL +F
Subjt:  IKEAGPWFYDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGDCSLRSKTKKPDKWIKGSYEKLPDF

Query:  CYGCGLLGHTIKEC
        C  CG+L H   EC
Subjt:  CYGCGLLGHTIKEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGAACAAACGGAGACGGAGGAGATTATAAAGCACCTGAGGGCGCTAAAGGTAACTGAGGAGGAAAAAACAAGTGTATTCCATTTGAAGGAAGATGAGGTTGACTT
ATCTCAGAGGAAATTGGAAAACGCCCTTTTGTGCAAAATTCTCACAAACAAAAAAATCAATCCTGAGGTGAATTCTCGTATTAAAGGTTGGATCAAGGAGGCGGGGCCAT
GGTTCTATGATAAAGCAATGTTGTTGATGGAGAAACCAAGAGGAGATAGTTGTGGAGATGACTTGGATTTCAGGTATGTATCCTTCTGGGTTCATTTCCATAAACTGCCT
TTAGCTTGTTTTTCTAGGAACTCGGCAATGGAAATTGGGAGTCTACTTGGCAAGGTCGAACAACTAGATCTAGATGAAGAGCTGGAACAGTATGGAGATTGCTCATTGCG
GTCGAAAACAAAGAAACCAGACAAGTGGATTAAGGGGTCGTATGAAAAGTTGCCGGACTTTTGTTATGGCTGCGGATTGTTAGGACATACGATTAAGGAGTGCGACCAAG
CTAAAGATGCAACTGAAGAAACTCTCCCTTATGGCTCGTGGTTAAGAGAGCCAACAAGGCTCAAAGTTCAGGAGCCTAGCTATTGGTTTTTTAATGGGGGTCGTGGAAGA
ATTGGGGAGAGAGGTAGAGGTAGTTGGAGGCAACTGAATATCGAGGAGGATAGCTACACATCAAGTGAAAGTAATCTGGTGTTGCCATCGGAAAAGACAATTGACGGCGG
AAAAGAAAATTCCAGTCCTCCGGCGAATCAAGAGAAACGTGATCCTCCTCCTCCGGGCGGTGGCCCAACGGTAACTTTGATGAATATGGAAGAAGCGGAAATTGCGGGGA
AAATTGACGATCTGAGCGGCAAAATAAATGATGAAACGGATAGGAAAAAGTCAAGCGGTAGTATAAGTGACAAAGATTCATCCGGTGCGGAAATCAAGGAAGTATCTGTT
GGATCGATATGA
mRNA sequenceShow/hide mRNA sequence
ATGACGGAACAAACGGAGACGGAGGAGATTATAAAGCACCTGAGGGCGCTAAAGGTAACTGAGGAGGAAAAAACAAGTGTATTCCATTTGAAGGAAGATGAGGTTGACTT
ATCTCAGAGGAAATTGGAAAACGCCCTTTTGTGCAAAATTCTCACAAACAAAAAAATCAATCCTGAGGTGAATTCTCGTATTAAAGGTTGGATCAAGGAGGCGGGGCCAT
GGTTCTATGATAAAGCAATGTTGTTGATGGAGAAACCAAGAGGAGATAGTTGTGGAGATGACTTGGATTTCAGGTATGTATCCTTCTGGGTTCATTTCCATAAACTGCCT
TTAGCTTGTTTTTCTAGGAACTCGGCAATGGAAATTGGGAGTCTACTTGGCAAGGTCGAACAACTAGATCTAGATGAAGAGCTGGAACAGTATGGAGATTGCTCATTGCG
GTCGAAAACAAAGAAACCAGACAAGTGGATTAAGGGGTCGTATGAAAAGTTGCCGGACTTTTGTTATGGCTGCGGATTGTTAGGACATACGATTAAGGAGTGCGACCAAG
CTAAAGATGCAACTGAAGAAACTCTCCCTTATGGCTCGTGGTTAAGAGAGCCAACAAGGCTCAAAGTTCAGGAGCCTAGCTATTGGTTTTTTAATGGGGGTCGTGGAAGA
ATTGGGGAGAGAGGTAGAGGTAGTTGGAGGCAACTGAATATCGAGGAGGATAGCTACACATCAAGTGAAAGTAATCTGGTGTTGCCATCGGAAAAGACAATTGACGGCGG
AAAAGAAAATTCCAGTCCTCCGGCGAATCAAGAGAAACGTGATCCTCCTCCTCCGGGCGGTGGCCCAACGGTAACTTTGATGAATATGGAAGAAGCGGAAATTGCGGGGA
AAATTGACGATCTGAGCGGCAAAATAAATGATGAAACGGATAGGAAAAAGTCAAGCGGTAGTATAAGTGACAAAGATTCATCCGGTGCGGAAATCAAGGAAGTATCTGTT
GGATCGATATGA
Protein sequenceShow/hide protein sequence
MTEQTETEEIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRKLENALLCKILTNKKINPEVNSRIKGWIKEAGPWFYDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLP
LACFSRNSAMEIGSLLGKVEQLDLDEELEQYGDCSLRSKTKKPDKWIKGSYEKLPDFCYGCGLLGHTIKECDQAKDATEETLPYGSWLREPTRLKVQEPSYWFFNGGRGR
IGERGRGSWRQLNIEEDSYTSSESNLVLPSEKTIDGGKENSSPPANQEKRDPPPPGGGPTVTLMNMEEAEIAGKIDDLSGKINDETDRKKSSGSISDKDSSGAEIKEVSV
GSI