; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041673 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041673
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr13:23635939..23636640
RNA-Seq ExpressionLag0041673
SyntenyLag0041673
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037436.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.1e-0736.84Show/hide
Query:  TLMTKYPALYNLSLKKEAFIADLWNPSTGSWNLHLRRNLNENEILEWAILSHHLTNFSLKDEEDSWSWQLGNIDSFTTGSLTKKLASSSPTTEQN
        +L   YP LY LS  + A I +LW+P+T  WNLH RR LN+ EI  W  L   L   +L   +++  W   +  ++T  S  ++L S  PT   N
Subjt:  TLMTKYPALYNLSLKKEAFIADLWNPSTGSWNLHLRRNLNENEILEWAILSHHLTNFSLKDEEDSWSWQLGNIDSFTTGSLTKKLASSSPTTEQN

KAG5593819.1 hypothetical protein H5410_035051 [Solanum commersonii]1.6e-0640.66Show/hide
Query:  YPALYNLSLKKEAFIADLWNPSTG-SWNLHLRRNLNENEILEWAILSHHLTNF-SLKDEEDSWSWQLGNIDSFTTGSLTKKLASSSPTTEQ
        +P L+ LS +++A +A++W   TG  WNLHLRRNLN+ E+     L + L +F +L  EED+  W++GN   F+  S  KKL +S+   +Q
Subjt:  YPALYNLSLKKEAFIADLWNPSTG-SWNLHLRRNLNENEILEWAILSHHLTNF-SLKDEEDSWSWQLGNIDSFTTGSLTKKLASSSPTTEQ

TYK00226.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.1e-0736.84Show/hide
Query:  TLMTKYPALYNLSLKKEAFIADLWNPSTGSWNLHLRRNLNENEILEWAILSHHLTNFSLKDEEDSWSWQLGNIDSFTTGSLTKKLASSSPTTEQN
        +L   YP LY LS  + A I +LW+P+T  WNLH RR LN+ EI  W  L   L   +L   +++  W   +  ++T  S  ++L S  PT   N
Subjt:  TLMTKYPALYNLSLKKEAFIADLWNPSTGSWNLHLRRNLNENEILEWAILSHHLTNFSLKDEEDSWSWQLGNIDSFTTGSLTKKLASSSPTTEQN

XP_004146266.1 uncharacterized protein LOC101206158 [Cucumis sativus]3.0e-0543.14Show/hide
Query:  IADLWNPSTGSWNLHLRRNLNENEILEWAILSHHLTNFSLKDEEDSWSWQL
        +AD+W     +WNLHL RNLN++EI++W  LS HL + + + + D W W +
Subjt:  IADLWNPSTGSWNLHLRRNLNENEILEWAILSHHLTNFSLKDEEDSWSWQL

XP_038891595.1 uncharacterized protein LOC120080986 [Benincasa hispida]1.0e-0546.88Show/hide
Query:  LMTKYPALYNLSLKKEAFIADLWNPSTGSWNLHLRRNLNENEILEWAILSHHLTNFSLKDEEDS
        L   +P LY L+ + EA +A LWN S+ +W+L+LR NL E EI EW  LSH+L +  L    DS
Subjt:  LMTKYPALYNLSLKKEAFIADLWNPSTGSWNLHLRRNLNENEILEWAILSHHLTNFSLKDEEDS

TrEMBL top hitse value%identityAlignment
A0A0V0IE94 Putative ovule protein1.9e-0540Show/hide
Query:  LMTKYPALYNLSLKKEAFIADLWNPSTGSWNLHLRRNLNENEILEWAILSHHLTNFS-LKDEEDSWSWQLGNIDSFTTGSLTKKL
        L  ++P LY+L   ++A +A+LWN     WNLH RRNLN+ E+         L  FS L +EEDS  W +G+   FT  S  + L
Subjt:  LMTKYPALYNLSLKKEAFIADLWNPSTGSWNLHLRRNLNENEILEWAILSHHLTNFS-LKDEEDSWSWQLGNIDSFTTGSLTKKL

A0A200QJ46 Reverse transcriptase zinc-binding domain1.9e-0538.3Show/hide
Query:  MTLMTKYPALYNLSLKKEAFIADLWNPSTG---SWNLHLRRNLNENEILEWAILSHHLTNFSLKDEEDSWSWQLGNIDSFTTGSLTKKLASSSP
        MTL   +P LY  S K+ AFI+D+ +  +    SW+L L R + E ++ E A ++H L +F L DEEDS  W+L     FT  S  +    S P
Subjt:  MTLMTKYPALYNLSLKKEAFIADLWNPSTG---SWNLHLRRNLNENEILEWAILSHHLTNFSLKDEEDSWSWQLGNIDSFTTGSLTKKLASSSP

A0A5A7T5L3 LINE-1 retrotransposable element ORF2 protein5.3e-0836.84Show/hide
Query:  TLMTKYPALYNLSLKKEAFIADLWNPSTGSWNLHLRRNLNENEILEWAILSHHLTNFSLKDEEDSWSWQLGNIDSFTTGSLTKKLASSSPTTEQN
        +L   YP LY LS  + A I +LW+P+T  WNLH RR LN+ EI  W  L   L   +L   +++  W   +  ++T  S  ++L S  PT   N
Subjt:  TLMTKYPALYNLSLKKEAFIADLWNPSTGSWNLHLRRNLNENEILEWAILSHHLTNFSLKDEEDSWSWQLGNIDSFTTGSLTKKLASSSPTTEQN

A0A5A7UU00 Putative isomerase BH0283-like protein1.9e-0535.71Show/hide
Query:  MTLMTKYPALYNLSLKKEAFIADLWNPSTGSWNLHLRRNLNENEILEWAILSHHLTNFSLKDEEDSWSWQLGNIDSFTTGSLTK
        ++L  K P LY LS  KEA + ++W+P    WN   RR LNE E   W +L + L   +    +D   W   + D++TT S  K
Subjt:  MTLMTKYPALYNLSLKKEAFIADLWNPSTGSWNLHLRRNLNENEILEWAILSHHLTNFSLKDEEDSWSWQLGNIDSFTTGSLTK

A0A5D3BPP1 LINE-1 retrotransposable element ORF2 protein5.3e-0836.84Show/hide
Query:  TLMTKYPALYNLSLKKEAFIADLWNPSTGSWNLHLRRNLNENEILEWAILSHHLTNFSLKDEEDSWSWQLGNIDSFTTGSLTKKLASSSPTTEQN
        +L   YP LY LS  + A I +LW+P+T  WNLH RR LN+ EI  W  L   L   +L   +++  W   +  ++T  S  ++L S  PT   N
Subjt:  TLMTKYPALYNLSLKKEAFIADLWNPSTGSWNLHLRRNLNENEILEWAILSHHLTNFSLKDEEDSWSWQLGNIDSFTTGSLTKKLASSSPTTEQN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTTATGACTAAATACCCAGCTCTGTATAACTTATCTCTAAAAAAAGAAGCTTTCATTGCTGATTTATGGAATCCTAGTACTGGGTCTTGGAATCTTCATTTGAG
GCGAAATCTCAATGAGAATGAAATCCTTGAGTGGGCTATTTTATCTCATCATCTTACCAACTTCTCCCTCAAAGACGAGGAAGACTCATGGAGTTGGCAGCTCGGAAACA
TTGACAGCTTCACCACGGGATCTCTCACGAAAAAATTGGCTTCCTCCTCTCCCACAACCGAACAGAATTATATAGTAGACTGTGGAAAGGCCCTATGCCGAAAAAGGTTA
AATTCTTCATATGGGAACTCAGTCATGCTAGCATCAACACCGCAGACATCATTCAGAAAAGATATCCTGGAAATAGTCTTTCTCCTAGTTGCTGTGTCATGTGCCACAAA
GCTAGCGAGACCCAAGCTCATCTATTCAGTAGTTGCGATTTGCATCAGAACTATGGTCTCATCTCCAGAATGCTTTTGGGTGGCTTTTGCTCGTCCAGGTGACATCTACA
CCCTTCTCTCTTTATCTGTTTGTGGATCTCCATTTACAAAAGACAAAAAGTTGATATGGCAGATTTTTTTGTATGCTTCCTATGGAATCTTTGGCTGGAAAGAAACGCTA
GAGTCTTTACTGATAAGCATCAAAGCATCAGTTCTTTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGACTCTTATGACTAAATACCCAGCTCTGTATAACTTATCTCTAAAAAAAGAAGCTTTCATTGCTGATTTATGGAATCCTAGTACTGGGTCTTGGAATCTTCATTTGAG
GCGAAATCTCAATGAGAATGAAATCCTTGAGTGGGCTATTTTATCTCATCATCTTACCAACTTCTCCCTCAAAGACGAGGAAGACTCATGGAGTTGGCAGCTCGGAAACA
TTGACAGCTTCACCACGGGATCTCTCACGAAAAAATTGGCTTCCTCCTCTCCCACAACCGAACAGAATTATATAGTAGACTGTGGAAAGGCCCTATGCCGAAAAAGGTTA
AATTCTTCATATGGGAACTCAGTCATGCTAGCATCAACACCGCAGACATCATTCAGAAAAGATATCCTGGAAATAGTCTTTCTCCTAGTTGCTGTGTCATGTGCCACAAA
GCTAGCGAGACCCAAGCTCATCTATTCAGTAGTTGCGATTTGCATCAGAACTATGGTCTCATCTCCAGAATGCTTTTGGGTGGCTTTTGCTCGTCCAGGTGACATCTACA
CCCTTCTCTCTTTATCTGTTTGTGGATCTCCATTTACAAAAGACAAAAAGTTGATATGGCAGATTTTTTTGTATGCTTCCTATGGAATCTTTGGCTGGAAAGAAACGCTA
GAGTCTTTACTGATAAGCATCAAAGCATCAGTTCTTTTATAG
Protein sequenceShow/hide protein sequence
MTLMTKYPALYNLSLKKEAFIADLWNPSTGSWNLHLRRNLNENEILEWAILSHHLTNFSLKDEEDSWSWQLGNIDSFTTGSLTKKLASSSPTTEQNYIVDCGKALCRKRL
NSSYGNSVMLASTPQTSFRKDILEIVFLLVAVSCATKLARPKLIYSVVAICIRTMVSSPECFWVAFARPGDIYTLLSLSVCGSPFTKDKKLIWQIFLYASYGIFGWKETL
ESLLISIKASVLL