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Lag0041677 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041677
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionpolyadenylate-binding protein-interacting protein 4-like
Genome locationchr13:23694155..23697652
RNA-Seq ExpressionLag0041677
SyntenyLag0041677
Gene Ontology termsGO:0034063 - stress granule assembly (biological process)
GO:0010494 - cytoplasmic stress granule (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600769.1 Polyadenylate-binding protein-interacting protein 4, partial [Cucurbita argyrosperma subsp. sororia]4.3e-0876.19Show/hide
Query:  EVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFK
        EVLLP GSFSKS+A CD ++M NDPT LLP TE KTCMESFK
Subjt:  EVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFK

KAG7031406.1 Polyadenylate-binding protein-interacting protein 4 [Cucurbita argyrosperma subsp. argyrosperma]4.3e-0876.19Show/hide
Query:  EVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFK
        EVLLP GSFSKS+A CD ++M NDPT LLP TE KTCMESFK
Subjt:  EVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFK

XP_022943019.1 polyadenylate-binding protein-interacting protein 4-like [Cucurbita moschata]2.5e-0878.57Show/hide
Query:  EVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFK
        EVLLP GSFSKSLA CD ++M NDPT LLP TE KTCMESFK
Subjt:  EVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFK

XP_022976186.1 polyadenylate-binding protein-interacting protein 4-like [Cucurbita maxima]2.5e-0878.57Show/hide
Query:  EVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFK
        EVLLP GSFSKSLA CD ++M NDPT LLP TE KTCMESFK
Subjt:  EVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFK

XP_023516964.1 polyadenylate-binding protein-interacting protein 4-like [Cucurbita pepo subsp. pepo]4.3e-0876.19Show/hide
Query:  EVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFK
        EVLLP GSFSKS+A CD ++M NDPT LLP TE KTCMESFK
Subjt:  EVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFK

TrEMBL top hitse value%identityAlignment
A0A0A0L531 SM-ATX domain-containing protein1.8e-0773.81Show/hide
Query:  EVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFK
        EV+LP GSFSKSLA CD ++ ANDPTLL P T AKTC ESFK
Subjt:  EVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFK

A0A5A7SRZ1 Polyadenylate-binding protein-interacting protein 4-like isoform X16.7e-0771.43Show/hide
Query:  EVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFK
        EV+LP GSF KSLA CD ++ ANDPTLL P T AKTC ESFK
Subjt:  EVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFK

A0A5D3BUT4 Polyadenylate-binding protein-interacting protein 4-like isoform X16.7e-0771.43Show/hide
Query:  EVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFK
        EV+LP GSF KSLA CD ++ ANDPTLL P T AKTC ESFK
Subjt:  EVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFK

A0A6J1FT17 polyadenylate-binding protein-interacting protein 4-like1.2e-0878.57Show/hide
Query:  EVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFK
        EVLLP GSFSKSLA CD ++M NDPT LLP TE KTCMESFK
Subjt:  EVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFK

A0A6J1IG89 polyadenylate-binding protein-interacting protein 4-like1.2e-0878.57Show/hide
Query:  EVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFK
        EVLLP GSFSKSLA CD ++M NDPT LLP TE KTCMESFK
Subjt:  EVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGAGTTTCTCCAGTCGATTGAGGTCGTATTGGAGGCGGCGGAAGGCGTGGGTGAGGATCTGGTGGAGCGAGATGCAGAATGAAAATGGTGAAGCACAGTATCCAAG
GTCATATTGGGCTATTTCAAATGTACAGGAAGTTCTACTTCCAGATGGTAGTTTTTCCAAAAGTTTGGCTAATTGTGATAAGAAAGCCATGGCCAATGATCCCACTTTGT
TGCTTCCAGTGACAGAGGCCAAGACATGTATGGAGTCATTCAAAATGACCTTCTTGTTTGGTCTAAATACAGTTGTGGGACACTTACTAAGGGATGTCAAGGATACCACC
ATTAGTCCACTTGCTAATGAGATTGCTAATGCTGGCAGGAAAATGTGCCAATCGGTTGCTTGCAACATCTGGCTTACCTCTGATTGCAAGACAGATGAAGAGGTTAGAAT
TGAGTTCTATATGGGCCCTCCTTGCAGCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGAGTTTCTCCAGTCGATTGAGGTCGTATTGGAGGCGGCGGAAGGCGTGGGTGAGGATCTGGTGGAGCGAGATGCAGAATGAAAATGGTGAAGCACAGTATCCAAG
GTCATATTGGGCTATTTCAAATGTACAGGAAGTTCTACTTCCAGATGGTAGTTTTTCCAAAAGTTTGGCTAATTGTGATAAGAAAGCCATGGCCAATGATCCCACTTTGT
TGCTTCCAGTGACAGAGGCCAAGACATGTATGGAGTCATTCAAAATGACCTTCTTGTTTGGTCTAAATACAGTTGTGGGACACTTACTAAGGGATGTCAAGGATACCACC
ATTAGTCCACTTGCTAATGAGATTGCTAATGCTGGCAGGAAAATGTGCCAATCGGTTGCTTGCAACATCTGGCTTACCTCTGATTGCAAGACAGATGAAGAGGTTAGAAT
TGAGTTCTATATGGGCCCTCCTTGCAGCATTTGA
Protein sequenceShow/hide protein sequence
MWSFSSRLRSYWRRRKAWVRIWWSEMQNENGEAQYPRSYWAISNVQEVLLPDGSFSKSLANCDKKAMANDPTLLLPVTEAKTCMESFKMTFLFGLNTVVGHLLRDVKDTT
ISPLANEIANAGRKMCQSVACNIWLTSDCKTDEEVRIEFYMGPPCSI