CuGenDBv2

Gene ID	Lag0041698
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	protein CHROMATIN REMODELING 19
Genome location	chr13:24287700..24288369
RNA-Seq Expression	Lag0041698
Synteny	Lag0041698
Gene Ontology terms	GO:0005524 - ATP binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004140399.1 protein CHROMATIN REMODELING 19 [Cucumis sativus]

1.2e-73

89.02

Show/hide

Query:  MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDE
        MKRVF+EISD+EWSNHSFKPSRV +KPQTE  IPPPIESFAYRP QLYISDESSDDCVVVME+SKN+EENLED+DVEVEGV STTAVSRGRRFVVDDED+
Subjt:  MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDE

Query:  ESERELTEVCDVRSTSEE--EEEREDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ
        ESERELTEVCDV+STSEE  EE RED+DDVV KALQKCAKLSAELKRELYGSSVSA ERYSEVESSSVRIVTQ
Subjt:  ESERELTEVCDVRSTSEE--EEEREDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ

XP_022943065.1 protein CHROMATIN REMODELING 19 [Cucurbita moschata]

4.3e-74

87.5

Show/hide

Query:  MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDE
        MKRVFDEISDDEWSNHSFKPSRV SKPQT+ PIPPPIESFAYRP  LYISD+S DDCVVVME+SKNF+E+LEDDDVEVEGV S+TA+SRGRRFVVDDEDE
Subjt:  MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDE

Query:  ESERELTEVCDVRSTSEEEEE-----REDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ
        ESE+ELTEVCDVRSTSEEEEE     REDEDDVV  AL+KCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ
Subjt:  ESERELTEVCDVRSTSEEEEE-----REDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ

XP_038877194.1 protein CHROMATIN REMODELING 19 isoform X1 [Benincasa hispida]

1.1e-74

89.02

Show/hide

Query:  MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDE
        MKRVF+EISD+EWSNHSFKPSRV SKPQTE  IPPPIESFAYRPQQLYISDESSDDC VVME+SKNFEENLED+DVEVEGV STT VSRGRRFV+DDEDE
Subjt:  MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDE

Query:  ESERELTEVCDVRSTSEE--EEEREDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ
        +SERELTEVCDV+STSEE  EE+RED+DDVV KALQKCAKLS ELKRELYGSSVSACERYSEVESSSVRIVTQ
Subjt:  ESERELTEVCDVRSTSEE--EEEREDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ

XP_038877196.1 protein CHROMATIN REMODELING 19 isoform X2 [Benincasa hispida]

1.1e-74

89.02

Show/hide

Query:  MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDE
        MKRVF+EISD+EWSNHSFKPSRV SKPQTE  IPPPIESFAYRPQQLYISDESSDDC VVME+SKNFEENLED+DVEVEGV STT VSRGRRFV+DDEDE
Subjt:  MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDE

Query:  ESERELTEVCDVRSTSEE--EEEREDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ
        +SERELTEVCDV+STSEE  EE+RED+DDVV KALQKCAKLS ELKRELYGSSVSACERYSEVESSSVRIVTQ
Subjt:  ESERELTEVCDVRSTSEE--EEEREDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ

XP_038877197.1 protein CHROMATIN REMODELING 19 isoform X3 [Benincasa hispida]

1.1e-74

89.02

Show/hide

Query:  MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDE
        MKRVF+EISD+EWSNHSFKPSRV SKPQTE  IPPPIESFAYRPQQLYISDESSDDC VVME+SKNFEENLED+DVEVEGV STT VSRGRRFV+DDEDE
Subjt:  MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDE

Query:  ESERELTEVCDVRSTSEE--EEEREDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ
        +SERELTEVCDV+STSEE  EE+RED+DDVV KALQKCAKLS ELKRELYGSSVSACERYSEVESSSVRIVTQ
Subjt:  ESERELTEVCDVRSTSEE--EEEREDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQW9 Uncharacterized protein

6.0e-74

89.02

Show/hide

Query:  MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDE
        MKRVF+EISD+EWSNHSFKPSRV +KPQTE  IPPPIESFAYRP QLYISDESSDDCVVVME+SKN+EENLED+DVEVEGV STTAVSRGRRFVVDDED+
Subjt:  MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDE

Query:  ESERELTEVCDVRSTSEE--EEEREDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ
        ESERELTEVCDV+STSEE  EE RED+DDVV KALQKCAKLSAELKRELYGSSVSA ERYSEVESSSVRIVTQ
Subjt:  ESERELTEVCDVRSTSEE--EEEREDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ

A0A1S3CC04 protein CHROMATIN REMODELING 19 isoform X1

3.3e-72

87.28

Show/hide

Query:  MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDE
        MKRVFDEISD+EWSNHSFKPSRV +KPQT   IPPPIESFAYR  QLYISDESSDDCVVVME+SKN+EENLED+DVEVEGV STTAVSRGRRFVVDDEDE
Subjt:  MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDE

Query:  ESERELTEVCDVRSTSEE--EEEREDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ
        ESERELTEV DV+STS++  EE+RED+DDVV KALQKCAKLSAELKRELYGSSVS CERYSEVESSSVRIVTQ
Subjt:  ESERELTEVCDVRSTSEE--EEEREDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ

A0A5A7VJ30 Protein CHROMATIN REMODELING 19 isoform X3

3.3e-72

87.28

Show/hide

Query:  MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDE
        MKRVFDEISD+EWSNHSFKPSRV +KPQT   IPPPIESFAYR  QLYISDESSDDCVVVME+SKN+EENLED+DVEVEGV STTAVSRGRRFVVDDEDE
Subjt:  MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDE

Query:  ESERELTEVCDVRSTSEE--EEEREDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ
        ESERELTEV DV+STS++  EE+RED+DDVV KALQKCAKLSAELKRELYGSSVS CERYSEVESSSVRIVTQ
Subjt:  ESERELTEVCDVRSTSEE--EEEREDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ

A0A6J1FXC0 protein CHROMATIN REMODELING 19

2.1e-74

87.5

Show/hide

Query:  MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDE
        MKRVFDEISDDEWSNHSFKPSRV SKPQT+ PIPPPIESFAYRP  LYISD+S DDCVVVME+SKNF+E+LEDDDVEVEGV S+TA+SRGRRFVVDDEDE
Subjt:  MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDE

Query:  ESERELTEVCDVRSTSEEEEE-----REDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ
        ESE+ELTEVCDVRSTSEEEEE     REDEDDVV  AL+KCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ
Subjt:  ESERELTEVCDVRSTSEEEEE-----REDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ

A0A6J1JU99 protein CHROMATIN REMODELING 19

7.8e-74

86.44

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Query:  MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDE
        MKRVFDEISDDEWSNHSFKPSRV SKPQT+ PIPPPIESFAYRP  LYISD+S DDCVVVME+SKNF+E+LEDDDVEVEGV S+T +SRGRRFVVDDEDE
Subjt:  MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDE

Query:  ESERELTEVCDVRSTSEEEEE------REDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ
        ESE+ELTEVCDVRSTSEEEEE      REDEDDVV  AL+KCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ
Subjt:  ESERELTEVCDVRSTSEEEEE------REDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ

SwissProt top hits

e value

%identity

Alignment

Q9ZUL5 Protein CHROMATIN REMODELING 19

1.7e-25

44.62

Show/hide

Query:  MKRVFDEISDDEWSNHSFKPSRVLSKPQT------ETPIPPPIESFAYR--PQQLYISDESSD-DCVVVMETSK--------NFEENLEDDDVEVEGVSS
        MKR FDEIS++EWS HSF  SRVL +P+T       T   P IESFA+R     + I   SSD DCV + +           N E+ L +D+ EVE    
Subjt:  MKRVFDEISDDEWSNHSFKPSRVLSKPQT------ETPIPPPIESFAYR--PQQLYISDESSD-DCVVVMETSK--------NFEENLEDDDVEVEGVSS

Query:  TTAVSR-GRRFVV------DDEDEESERELTEVCDVRSTSEEEEEREDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ
            +R GRRFV+      DD+D+E+E   +E             R +++DVV KALQKCAK+SA+L++ELYG+S    +RYSEVE+S+VRIVTQ
Subjt:  TTAVSR-GRRFVV------DDEDEESERELTEVCDVRSTSEEEEEREDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ

Arabidopsis top hits

e value

%identity

Alignment

AT2G02090.1 SNF2 domain-containing protein / helicase domain-containing protein

1.2e-26

44.62

Show/hide

Query:  MKRVFDEISDDEWSNHSFKPSRVLSKPQT------ETPIPPPIESFAYR--PQQLYISDESSD-DCVVVMETSK--------NFEENLEDDDVEVEGVSS
        MKR FDEIS++EWS HSF  SRVL +P+T       T   P IESFA+R     + I   SSD DCV + +           N E+ L +D+ EVE    
Subjt:  MKRVFDEISDDEWSNHSFKPSRVLSKPQT------ETPIPPPIESFAYR--PQQLYISDESSD-DCVVVMETSK--------NFEENLEDDDVEVEGVSS

Query:  TTAVSR-GRRFVV------DDEDEESERELTEVCDVRSTSEEEEEREDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ
            +R GRRFV+      DD+D+E+E   +E             R +++DVV KALQKCAK+SA+L++ELYG+S    +RYSEVE+S+VRIVTQ
Subjt:  TTAVSR-GRRFVV------DDEDEESERELTEVCDVRSTSEEEEEREDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ

Sequences

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CDS sequence

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ATGAAGCGCGTCTTCGACGAAATTTCCGACGACGAATGGTCAAATCACTCCTTCAAGCCCTCTCGCGTCTTGAGCAAACCGCAGACTGAAACTCCGATCCCTCCTCCGAT
TGAATCTTTCGCTTACCGACCGCAGCAGCTCTATATTTCCGACGAGAGCAGTGACGATTGTGTCGTAGTCATGGAAACTTCTAAGAATTTCGAGGAAAATTTGGAGGACG
ACGATGTCGAGGTCGAGGGAGTCAGCTCCACCACGGCGGTGAGTCGTGGCCGTCGGTTTGTGGTTGATGATGAAGATGAAGAAAGTGAGAGGGAATTGACCGAGGTTTGC
GATGTAAGGTCGACGAGCGAGGAGGAGGAGGAGAGGGAGGACGAGGATGACGTCGTGAGTAAGGCTCTGCAGAAATGTGCAAAATTATCTGCTGAGTTGAAGAGAGAGCT
GTACGGCTCTTCTGTTTCTGCCTGCGAGCGATATTCGGAAGTGGAATCTTCTTCTGTTAGGATAGTTACCCAGAAAGGTAGGAAACAAGGTAGATTGAACGGTTCCATGT
GTACTAGTGGTTTGCACGAAAACAAGTGTTAG

mRNA sequence

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Protein sequence

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MKRVFDEISDDEWSNHSFKPSRVLSKPQTETPIPPPIESFAYRPQQLYISDESSDDCVVVMETSKNFEENLEDDDVEVEGVSSTTAVSRGRRFVVDDEDEESERELTEVC
DVRSTSEEEEEREDEDDVVSKALQKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQKGRKQGRLNGSMCTSGLHENKC

Lag0041698 (gene) of Sponge gourd (AG-4) v1 genome