; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041700 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041700
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein CHROMATIN REMODELING 19
Genome locationchr13:24290923..24293355
RNA-Seq ExpressionLag0041700
SyntenyLag0041700
Gene Ontology termsGO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031433.1 Protein CHROMATIN REMODELING 19 [Cucurbita argyrosperma subsp. argyrosperma]8.8e-1654.72Show/hide
Query:  MKVKTLEDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGEGSDDPTPHDLGPTL----HLPSQKTSTNHSSILKIMKAELLSLAAQEEQRWKQ
        M++KTLEDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG    D     LG T+    +L   K  +N S         L+   A   + W++
Subjt:  MKVKTLEDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGEGSDDPTPHDLGPTL----HLPSQKTSTNHSSILKIMKAELLSLAAQEEQRWKQ

Query:  KCKEKW
        + K KW
Subjt:  KCKEKW
XP_004140399.1 protein CHROMATIN REMODELING 19 [Cucumis sativus]9.1e-1395Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG
        +DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLY+KGVGG
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG
XP_022157601.1 protein CHROMATIN REMODELING 19 [Momordica charantia]3.1e-1397.5Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG
        +DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG
XP_022991239.1 protein CHROMATIN REMODELING 19 [Cucurbita maxima]9.1e-1353Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGEGSDDPTPHDLGPTL----HLPSQKTSTNHSSILKIMKAELLSLAAQEEQRWKQKCKEKW
        +DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG    D     LG T+    +L   K  +N S         L+   A   + W+++ K KW
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGEGSDDPTPHDLGPTL----HLPSQKTSTNHSSILKIMKAELLSLAAQEEQRWKQKCKEKW
XP_023545956.1 LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 19 [Cucurbita pepo subsp. pepo]9.1e-1353Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGEGSDDPTPHDLGPTL----HLPSQKTSTNHSSILKIMKAELLSLAAQEEQRWKQKCKEKW
        +DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG    D     LG T+    +L   K  +N S         L+   A   + W+++ K KW
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGEGSDDPTPHDLGPTL----HLPSQKTSTNHSSILKIMKAELLSLAAQEEQRWKQKCKEKW
TrEMBL top hitse value%identityAlignment
A0A1S3CC04 protein CHROMATIN REMODELING 19 isoform X11.3e-1292.5Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG
        +DDINAACK EDSDFEPVLKPYQLVGVNFLLLLY+KGVGG
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG
A0A1S3CC36 protein CHROMATIN REMODELING 19 isoform X21.3e-1292.5Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG
        +DDINAACK EDSDFEPVLKPYQLVGVNFLLLLY+KGVGG
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG
A0A6J1DYN8 protein CHROMATIN REMODELING 191.5e-1397.5Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG
        +DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG
A0A6J1FXC0 protein CHROMATIN REMODELING 194.4e-1353Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGEGSDDPTPHDLGPTL----HLPSQKTSTNHSSILKIMKAELLSLAAQEEQRWKQKCKEKW
        +DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG    D     LG T+    +L   K  +N S         L+   A   + W+++ K KW
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGEGSDDPTPHDLGPTL----HLPSQKTSTNHSSILKIMKAELLSLAAQEEQRWKQKCKEKW
A0A6J1JU99 protein CHROMATIN REMODELING 194.4e-1353Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGEGSDDPTPHDLGPTL----HLPSQKTSTNHSSILKIMKAELLSLAAQEEQRWKQKCKEKW
        +DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG    D     LG T+    +L   K  +N S         L+   A   + W+++ K KW
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGEGSDDPTPHDLGPTL----HLPSQKTSTNHSSILKIMKAELLSLAAQEEQRWKQKCKEKW
SwissProt top hitse value%identityAlignment
Q9ZUL5 Protein CHROMATIN REMODELING 192.1e-1277.5Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG
        ++DI+ ACKAEDSDF+P+LKPYQLVGVNFLLLLY+KG+ G
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein6.3e-0429.35Show/hide
Query:  LLYRKGVGGEGSDDPTPHDLGPTLHLPSQKTSTNHSSILK---IMKAELLSLAAQEEQRWKQKCKEKWISEGDINSSFFHRIMAAKRRKNTI
        LL R+G G       T   L     + SQ  +    S+ +   + + +    AA  E  ++QK + KW+ +GD N+ FFH+++ A + KN I
Subjt:  LLYRKGVGGEGSDDPTPHDLGPTLHLPSQKTSTNHSSILK---IMKAELLSLAAQEEQRWKQKCKEKWISEGDINSSFFHRIMAAKRRKNTI
AT2G02090.1 SNF2 domain-containing protein / helicase domain-containing protein1.5e-1377.5Show/hide
Query:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG
        ++DI+ ACKAEDSDF+P+LKPYQLVGVNFLLLLY+KG+ G
Subjt:  EDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTGAAGACACTTGAGGATGATATTAATGCGGCTTGTAAGGCTGAAGATTCTGATTTTGAGCCTGTTCTCAAGCCATATCAACTGGTTGGCGTGAACTTTCTTCT
TCTTTTGTATCGGAAGGGAGTTGGTGGAGAAGGCTCTGACGACCCTACTCCACATGATCTTGGCCCTACTCTTCATCTTCCTTCCCAAAAGACCTCTACCAACCACTCCT
CAATCCTGAAAATTATGAAAGCTGAGCTTTTATCCTTGGCAGCCCAAGAAGAACAAAGATGGAAACAGAAGTGCAAAGAGAAATGGATCTCAGAAGGTGATATTAATTCA
AGTTTCTTCCACCGTATCATGGCCGCCAAAAGGCGCAAGAACACCATTATGGAAATTCTATCGGTTCATGGCAATAGCCTTTTGAAGGAAGAGGAGATTGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTGAAGACACTTGAGGATGATATTAATGCGGCTTGTAAGGCTGAAGATTCTGATTTTGAGCCTGTTCTCAAGCCATATCAACTGGTTGGCGTGAACTTTCTTCT
TCTTTTGTATCGGAAGGGAGTTGGTGGAGAAGGCTCTGACGACCCTACTCCACATGATCTTGGCCCTACTCTTCATCTTCCTTCCCAAAAGACCTCTACCAACCACTCCT
CAATCCTGAAAATTATGAAAGCTGAGCTTTTATCCTTGGCAGCCCAAGAAGAACAAAGATGGAAACAGAAGTGCAAAGAGAAATGGATCTCAGAAGGTGATATTAATTCA
AGTTTCTTCCACCGTATCATGGCCGCCAAAAGGCGCAAGAACACCATTATGGAAATTCTATCGGTTCATGGCAATAGCCTTTTGAAGGAAGAGGAGATTGTATAA
Protein sequenceShow/hide protein sequence
MKVKTLEDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGGEGSDDPTPHDLGPTLHLPSQKTSTNHSSILKIMKAELLSLAAQEEQRWKQKCKEKWISEGDINS
SFFHRIMAAKRRKNTIMEILSVHGNSLLKEEEIV