| GenBank top hits | e value | %identity | Alignment |
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| KAE8781863.1 retrotransposon unclassified [Hordeum vulgare] | 5.2e-23 | 36.87 | Show/hide |
Query: FLWKGGSKEGGQHLVRWSNILHPLDRGGLGIRSMRDKNKALMARWIWRYKQEDKALWKTLIKEKYGSSTFLNWASLATAKGPWKSI--VKHQHLVTSRIS
F W+ G+ H+V+W++I P DRGGLGI + R N ALM RW+WR Q D LW LIK KY L SLA WKSI +KH+ + RIS
Subjt: FLWKGGSKEGGQHLVRWSNILHPLDRGGLGIRSMRDKNKALMARWIWRYKQEDKALWKTLIKEKYGSSTFLNWASLATAKGPWKSI--VKHQHLVTSRIS
Query: HLVGNGASTLFWTDPWV----------------TDPPLEKISSTMDE-------------EATEWADLSLDLAPIVLSHEEDSWRWNIHPSGQFSTKS
VG+G+ T FW DPW+ DP + +S +++ E +W +L L + P+ +S DS W++ PSG+FS S
Subjt: HLVGNGASTLFWTDPWV----------------TDPPLEKISSTMDE-------------EATEWADLSLDLAPIVLSHEEDSWRWNIHPSGQFSTKS
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| KAE8805769.1 retrotransposon unclassified [Hordeum vulgare] | 3.0e-23 | 35.4 | Show/hide |
Query: FLWKGGSKEGGQHLVRWSNILHPLDRGGLGIRSMRDKNKALMARWIWRYKQEDKALWKTLIKEKYGSSTFLNWASLATAKGPWKSI--VKHQHLVTSRIS
F W+ G H+V+W++I P DRGGLGI + R N ALM RW+WR Q D LW LI+ KY L SLAT WKSI +KH+ + RIS
Subjt: FLWKGGSKEGGQHLVRWSNILHPLDRGGLGIRSMRDKNKALMARWIWRYKQEDKALWKTLIKEKYGSSTFLNWASLATAKGPWKSI--VKHQHLVTSRIS
Query: HLVGNGASTLFWTDPWV----------------TDPPLEKISSTMDE-------------EATEWADLSLDLAPIVLSHEEDSWRWNIHPSGQFSTKSLL
VGNG+ T FW DPW+ TDP + +S +++ E +W +L L P+ S D+ W++ PSG+FS S
Subjt: HLVGNGASTLFWTDPWV----------------TDPPLEKISSTMDE-------------EATEWADLSLDLAPIVLSHEEDSWRWNIHPSGQFSTKSLL
Query: SDMSDSRCLLESSLTKGIWKDNYPKK
+ L S +WK P K
Subjt: SDMSDSRCLLESSLTKGIWKDNYPKK
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| RVW45179.1 putative ribonuclease H protein [Vitis vinifera] | 2.3e-23 | 33.49 | Show/hide |
Query: MERLFRNFLWKGGSKEGGQHLVRWSNILHPLDRGGLGIRSMRDKNKALMARWIWRYKQEDKALWKTLIKEKYGSSTFLNW----ASLATAKGPWKSIVKH
+E++ R+FLW GG+ G HLV+W + GGLG+R + N+AL+ +WIWR+ E LWK +I KYG + W S A G WK I+K
Subjt: MERLFRNFLWKGGSKEGGQHLVRWSNILHPLDRGGLGIRSMRDKNKALMARWIWRYKQEDKALWKTLIKEKYGSSTFLNW----ASLATAKGPWKSIVKH
Query: QHLVTSRISHLVGNGASTLFWTDPWVTDPPLEKISSTMDEEATEW-ADLSLDLAPIVLSH----EEDSWRWNIHPSGQFSTKSLLSDMSDSRCLLESSLT
+S LVG G+ FW D W ++ S + + +W D+ DL + H E+DS +W G F K S + S L +
Subjt: QHLVTSRISHLVGNGASTLFWTDPWVTDPPLEKISSTMDEEATEW-ADLSLDLAPIVLSH----EEDSWRWNIHPSGQFSTKSLLSDMSDSRCLLESSLT
Query: KGIWKDNYPKKNSSY
+GIW D P K S +
Subjt: KGIWKDNYPKKNSSY
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| RVW62551.1 putative ribonuclease H protein [Vitis vinifera] | 4.7e-24 | 35.71 | Show/hide |
Query: MERLFRNFLWKGGSKEGGQHLVRWSNILHPLDRGGLGIRSMRDKNKALMARWIWRYKQEDKALWKTLIKEKYGSSTFLNWASL----ATAKGPWKSIVKH
+E++ R+FLW GG+ E HLVRW + +GGLG++++ NKAL+A+W WR+ E +ALW +I+ KYG W+S A G WK I +
Subjt: MERLFRNFLWKGGSKEGGQHLVRWSNILHPLDRGGLGIRSMRDKNKALMARWIWRYKQEDKALWKTLIKEKYGSSTFLNWASL----ATAKGPWKSIVKH
Query: QHLVTSRISHLVGNGASTLFWTDPWVTDPPL-----EKISSTMDEE---ATEWADLSL-----DLAPIVLSHEEDSWRWNIHPSGQFSTKSL-LSDMSDS
LV++R+ +VGNG FW D W D PL + T D+E A W L+ + +V+ ED W SG+FS KSL L+ +
Subjt: QHLVTSRISHLVGNGASTLFWTDPWVTDPPL-----EKISSTMDEE---ATEWADLSL-----DLAPIVLSHEEDSWRWNIHPSGQFSTKSL-LSDMSDS
Query: RCLLESSLTKGIWKDNYPKKNSSY
SSL IW N K S +
Subjt: RCLLESSLTKGIWKDNYPKKNSSY
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| RVW99473.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera] | 5.2e-23 | 36.02 | Show/hide |
Query: MERLFRNFLWKGGSKEGGQHLVRWSNILHPLDRGGLGIRSMRDKNKALMARWIWRYKQEDKALWKTLIKEKYGSSTFLNWASL----ATAKGPWKSIVKH
+E++ R+FLW GG+ E HLVRW + +GGLG++ + NKAL+A+W WR+ E KALW +I+ KYG W S A G WK I
Subjt: MERLFRNFLWKGGSKEGGQHLVRWSNILHPLDRGGLGIRSMRDKNKALMARWIWRYKQEDKALWKTLIKEKYGSSTFLNWASL----ATAKGPWKSIVKH
Query: QHLVTSRISHLVGNGASTLFWTDPWVTDPPLEKISSTMDEEATEWADLSLDLAPIVLSHEEDSWRWNIHPSGQFSTKSLLSDM-SDSRCLLESSLTKGIW
L ++R++ +VGNG FW D W D PL ++E A L V+ ED W SG+FS KSL + + L SS IW
Subjt: QHLVTSRISHLVGNGASTLFWTDPWVTDPPLEKISSTMDEEATEWADLSLDLAPIVLSHEEDSWRWNIHPSGQFSTKSLLSDM-SDSRCLLESSLTKGIW
Query: KDNYPKKNSSY
N K S +
Subjt: KDNYPKKNSSY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438EBZ4 Putative ribonuclease H protein | 1.1e-23 | 33.49 | Show/hide |
Query: MERLFRNFLWKGGSKEGGQHLVRWSNILHPLDRGGLGIRSMRDKNKALMARWIWRYKQEDKALWKTLIKEKYGSSTFLNW----ASLATAKGPWKSIVKH
+E++ R+FLW GG+ G HLV+W + GGLG+R + N+AL+ +WIWR+ E LWK +I KYG + W S A G WK I+K
Subjt: MERLFRNFLWKGGSKEGGQHLVRWSNILHPLDRGGLGIRSMRDKNKALMARWIWRYKQEDKALWKTLIKEKYGSSTFLNW----ASLATAKGPWKSIVKH
Query: QHLVTSRISHLVGNGASTLFWTDPWVTDPPLEKISSTMDEEATEW-ADLSLDLAPIVLSH----EEDSWRWNIHPSGQFSTKSLLSDMSDSRCLLESSLT
+S LVG G+ FW D W ++ S + + +W D+ DL + H E+DS +W G F K S + S L +
Subjt: QHLVTSRISHLVGNGASTLFWTDPWVTDPPLEKISSTMDEEATEW-ADLSLDLAPIVLSH----EEDSWRWNIHPSGQFSTKSLLSDMSDSRCLLESSLT
Query: KGIWKDNYPKKNSSY
+GIW D P K S +
Subjt: KGIWKDNYPKKNSSY
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| A0A438FRI9 Putative ribonuclease H protein | 2.3e-24 | 35.71 | Show/hide |
Query: MERLFRNFLWKGGSKEGGQHLVRWSNILHPLDRGGLGIRSMRDKNKALMARWIWRYKQEDKALWKTLIKEKYGSSTFLNWASL----ATAKGPWKSIVKH
+E++ R+FLW GG+ E HLVRW + +GGLG++++ NKAL+A+W WR+ E +ALW +I+ KYG W+S A G WK I +
Subjt: MERLFRNFLWKGGSKEGGQHLVRWSNILHPLDRGGLGIRSMRDKNKALMARWIWRYKQEDKALWKTLIKEKYGSSTFLNWASL----ATAKGPWKSIVKH
Query: QHLVTSRISHLVGNGASTLFWTDPWVTDPPL-----EKISSTMDEE---ATEWADLSL-----DLAPIVLSHEEDSWRWNIHPSGQFSTKSL-LSDMSDS
LV++R+ +VGNG FW D W D PL + T D+E A W L+ + +V+ ED W SG+FS KSL L+ +
Subjt: QHLVTSRISHLVGNGASTLFWTDPWVTDPPL-----EKISSTMDEE---ATEWADLSL-----DLAPIVLSHEEDSWRWNIHPSGQFSTKSL-LSDMSDS
Query: RCLLESSLTKGIWKDNYPKKNSSY
SSL IW N K S +
Subjt: RCLLESSLTKGIWKDNYPKKNSSY
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| A0A7C9A8S6 Reverse transcriptase domain-containing protein | 3.9e-24 | 30.57 | Show/hide |
Query: MERLFRNFLWKGGSKEGGQHLVRWSNILHPLDRGGLGIRSMRDKNKALMARWIWRYKQEDKALWKTLIKEKYGSSTFLNW---ASLATAKGPWKSIVKHQ
+ERL R+FLW + G H V W I P + GGLGIR +R N+ALM +W+WR+ E+ ALW+ +I KYG +F W +S A G WK+I
Subjt: MERLFRNFLWKGGSKEGGQHLVRWSNILHPLDRGGLGIRSMRDKNKALMARWIWRYKQEDKALWKTLIKEKYGSSTFLNW---ASLATAKGPWKSIVKHQ
Query: HLVTSRISHLVGNGASTLFWTDPWVTDPPLE----------------------------KISSTMDEEATEWADLSL--------DLAPIVLSHEEDSWR
+ S + V NG FW D W D PL+ T +W + S+ D + L D+
Subjt: HLVTSRISHLVGNGASTLFWTDPWVTDPPLE----------------------------KISSTMDEEATEWADLSL--------DLAPIVLSHEEDSWR
Query: WNIHPSGQFSTKSLLSDMSDSRCLLESSLTKGIWKDNYPKK------NSSYGNYHMELLVQRMSF
W++ +G FS KSL M S L + K IWK P K +S G E +++R +F
Subjt: WNIHPSGQFSTKSLLSDMSDSRCLLESSLTKGIWKDNYPKK------NSSYGNYHMELLVQRMSF
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| A0A803P8A0 Uncharacterized protein | 1.5e-23 | 29.33 | Show/hide |
Query: MERLFRNFLWKGGSKEGGQHLVRWSNILHPLDRGGLGIRSMRDKNKALMARWIWRYKQEDKALWKTLIKEKYGSSTFLNWAS----LATAKGPWKSIVKH
+E++ R+F W+GG GG HLV W + P GGL I + +NK L+ +W+WR+ E +LW +IK +YG + W + + +GPW I
Subjt: MERLFRNFLWKGGSKEGGQHLVRWSNILHPLDRGGLGIRSMRDKNKALMARWIWRYKQEDKALWKTLIKEKYGSSTFLNWAS----LATAKGPWKSIVKH
Query: QHLVTSRISHLVGNGASTLFWTDPWVTDPPLEKISST-------------------------------------MDEEATEWADLSLDLAPI-VLSHEED
H + VGNGAS FW D W+ P L T MD E L L + VLS +D
Subjt: QHLVTSRISHLVGNGASTLFWTDPWVTDPPLEKISST-------------------------------------MDEEATEWADLSLDLAPI-VLSHEED
Query: SWRWNIHPSGQFSTKSLLSDMSDSRCLLESSLTKGIWKDNYPKKNSSYG--------NYHMELLVQRMSFRSFWNGICQSFGW
S W G FS+KS S + ++ E S TK +WK+ P K +G N H L +R +C S GW
Subjt: SWRWNIHPSGQFSTKSLLSDMSDSRCLLESSLTKGIWKDNYPKKNSSYG--------NYHMELLVQRMSFRSFWNGICQSFGW
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| A0A803QI00 Uncharacterized protein | 2.3e-24 | 30.65 | Show/hide |
Query: MERLFRNFLWKGGSKEGGQHLVRWSNILHPLDRGGLGIRSMRDKNKALMARWIWRYKQEDKALWKTLIKEKYGSSTFL---NWASLATAKGPWKSIVKHQ
+E++ R+F W+GG GG HLV W + P GGL I + +NK L+ +W+WRY E +LW +IK +YG + W + A+ +GPWK I +
Subjt: MERLFRNFLWKGGSKEGGQHLVRWSNILHPLDRGGLGIRSMRDKNKALMARWIWRYKQEDKALWKTLIKEKYGSSTFL---NWASLATAKGPWKSIVKHQ
Query: HLVTSRISHLVGNGASTLFWTDPWVTD-------PPLEKISST------------------------------MDEEATEWADLSLDLAPI-VLSHEEDS
+ VGNGA+ FW D W+ P + IS M+ E L L + VL+ +DS
Subjt: HLVTSRISHLVGNGASTLFWTDPWVTD-------PPLEKISST------------------------------MDEEATEWADLSLDLAPI-VLSHEEDS
Query: WRWNIHPSGQFSTKSLLSDMSDSRCLLESSLTKGIWKDNYPKKNSSYG
W PSG FS+KS S S E TK +WK P K +G
Subjt: WRWNIHPSGQFSTKSLLSDMSDSRCLLESSLTKGIWKDNYPKKNSSYG
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