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Lag0041713 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041713
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr13:24828179..24828544
RNA-Seq ExpressionLag0041713
SyntenyLag0041713
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015387814.1 uncharacterized protein LOC107177842 [Citrus sinensis]7.4e-0857.14Show/hide
Query:  APASAISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQH
        A  + IS   C  C E H+ DNCP N ASV Y+G    QN+ NPYS TYNPRWRQH
Subjt:  APASAISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQH

XP_015389924.1 uncharacterized protein LOC107178820 [Citrus sinensis]6.3e-0755.17Show/hide
Query:  APASA--ISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQH
        APA+   ++   C  CSEEH  DNCP N ASV YVG    Q + NPYS TYNP W+QH
Subjt:  APASA--ISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQH

XP_022143608.1 uncharacterized protein LOC111013464 [Momordica charantia]1.1e-0855.36Show/hide
Query:  APASAISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQH
        AP   ++   C  CSE H+ DNCP N ASVFYV + GN   +NPYS TYNP WR H
Subjt:  APASAISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQH

XP_022159235.1 uncharacterized protein LOC111025653 [Momordica charantia]6.3e-0748.28Show/hide
Query:  NIAPASAISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQH
        N +P   I+   C  C + H ++NCP N +S++YVGQ  NQ ++NPYS TYNP W+QH
Subjt:  NIAPASAISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQH

XP_022159345.1 uncharacterized protein LOC111025764 [Momordica charantia]2.5e-0855.36Show/hide
Query:  APASAISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQH
        AP   ++   C  CSE H+ D CP N ASVFYVG  GN   +NPYS TYNP WR H
Subjt:  APASAISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQH

TrEMBL top hitse value%identityAlignment
A0A6J1CR45 uncharacterized protein LOC1110134645.5e-0955.36Show/hide
Query:  APASAISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQH
        AP   ++   C  CSE H+ DNCP N ASVFYV + GN   +NPYS TYNP WR H
Subjt:  APASAISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQH

A0A6J1DKX0 uncharacterized protein LOC1110210092.0e-0648.28Show/hide
Query:  NIAPASAISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQH
        N+AP   ++   C  C + H ++NCP   AS+ YVG QGNQ  ++PYS TYNP WR H
Subjt:  NIAPASAISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQH

A0A6J1DSZ5 uncharacterized protein LOC1110241073.0e-0746.55Show/hide
Query:  NIAPASAISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQH
        N +P   I+   C  C ++H ++NCP N +S++YVGQ  NQ ++NPYS TY+P W+QH
Subjt:  NIAPASAISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQH

A0A6J1DY39 uncharacterized protein LOC1110256533.0e-0748.28Show/hide
Query:  NIAPASAISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQH
        N +P   I+   C  C + H ++NCP N +S++YVGQ  NQ ++NPYS TYNP W+QH
Subjt:  NIAPASAISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQH

A0A6J1DYG0 uncharacterized protein LOC1110257641.2e-0855.36Show/hide
Query:  APASAISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQH
        AP   ++   C  CSE H+ D CP N ASVFYVG  GN   +NPYS TYNP WR H
Subjt:  APASAISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATCGGCGTGACTATGGGCATCCAAGAAAACATAGCCCCTGCCAGTGCTATCTCTTCTCCCTATTGTGATATTTGTAGTGAGGAGCATGTCACTGATAACTGTCC
ACTAAATCATGCATCTGTTTTTTATGTAGGTCAACAAGGGAACCAGAACAGATGGAATCCATATTCGGCTACATATAACCCAAGGTGGAGACAACATCAAACTTCTCCTG
GGGAGGTCAAGCCAATGCTATTAATGCCGATACAAATCAATTTGGAAAAGCTTCAACAGGATTCAATTCCCAGCCTACACAGCAGCAGTCACAGAAGAACTTCCAACCAA
TCCAAGTCTAGAATGCAAGCCAAGAGTCAAATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGATCGGCGTGACTATGGGCATCCAAGAAAACATAGCCCCTGCCAGTGCTATCTCTTCTCCCTATTGTGATATTTGTAGTGAGGAGCATGTCACTGATAACTGTCC
ACTAAATCATGCATCTGTTTTTTATGTAGGTCAACAAGGGAACCAGAACAGATGGAATCCATATTCGGCTACATATAACCCAAGGTGGAGACAACATCAAACTTCTCCTG
GGGAGGTCAAGCCAATGCTATTAATGCCGATACAAATCAATTTGGAAAAGCTTCAACAGGATTCAATTCCCAGCCTACACAGCAGCAGTCACAGAAGAACTTCCAACCAA
TCCAAGTCTAGAATGCAAGCCAAGAGTCAAATCTAG
Protein sequenceShow/hide protein sequence
MMIGVTMGIQENIAPASAISSPYCDICSEEHVTDNCPLNHASVFYVGQQGNQNRWNPYSATYNPRWRQHQTSPGEVKPMLLMPIQINLEKLQQDSIPSLHSSSHRRTSNQ
SKSRMQAKSQI