; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041718 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041718
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr13:25014068..25017369
RNA-Seq ExpressionLag0041718
SyntenyLag0041718
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]2.4e-15966.44Show/hide
Query:  PDYKIVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLSIQQLQDMITNCIK
        P   I++VM+T+  T E+RMAE+++ +N LMKA+EE+D +I  LK+ IE++  AESS T  IKN +KGK I+Q+ QPQ STSI SLS+QQLQ+MI N IK
Subjt:  PDYKIVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLSIQQLQDMITNCIK

Query:  AQYGGPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPESIDSWKELEREFL
         QYGGP Q   LYSK YTKRIDN+RMP GYQPPKFQQFDGKGNPKQH+ HF+ETCE  GT+ DLLVKQFVRTLKGNAFDWYTDLEPESIDSW++LER+FL
Subjt:  AQYGGPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPESIDSWKELEREFL

Query:  NCFYDTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSISSREIQDLILPNM
        N FY TRR VSM ELT TKQRKGE V++YINRWRA+SLDCKDRLTELS+VEMC Q MHW LLYIL+GIKP TFEELATRAHDMELSI++R   DL++P +
Subjt:  NCFYDTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSISSREIQDLILPNM

Query:  RKEGRNNEET-------IEESMVVNKTLPKSSSKEKR-----PTNGTHHLTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKCKRPEEMEKVNDPKYC
        RKE +  + T        +E+MVV+ T  K  SKEK+             TLKERQ+K+YPF D+D+PDML+QLLE QLI+LP+CKRP EM +VNDP YC
Subjt:  RKEGRNNEET-------IEESMVVNKTLPKSSSKEKR-----PTNGTHHLTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKCKRPEEMEKVNDPKYC

Query:  KYHRVIGHQVERCFILKDLILKLAMEGKLELDLDE
        KYHRVI H VE+CF+LK+LILKLA++ K+EL+LD+
Subjt:  KYHRVIGHQVERCFILKDLILKLAMEGKLELDLDE

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]7.2e-0736.22Show/hide
Query:  SSLQLLVLRCSKEENQCLASTFTRPSTFQRLSVSTSK-KSQSST-----SVFDRLKITNDRPRRKINNLDVKYFNEVCSDKKLKSSIPSRMKRKFYVLIN
        S  Q +    +K+ NQ    + TR S FQRL+ S  K +S S T     S F RL ++  R ++K +       + V  D++++S+ PSRMKRK +V +N
Subjt:  SSLQLLVLRCSKEENQCLASTFTRPSTFQRLSVSTSK-KSQSST-----SVFDRLKITNDRPRRKINNLDVKYFNEVCSDKKLKSSIPSRMKRKFYVLIN

Query:  TEGSLKVKPNLIILTNPTSQGSKQDHD
        TEGSLKVK + ++ T P     + + D
Subjt:  TEGSLKVKPNLIILTNPTSQGSKQDHD

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]2.6e-15866.05Show/hide
Query:  IVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLSIQQLQDMITNCIKAQYG
        I++VM+T   T E RMAE+++ +N LMK +EE+D +I  LK+ IE++  AESS   ++KN DKGK ++Q+ QPQ STSI SLS+QQLQ+MI + IK QYG
Subjt:  IVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLSIQQLQDMITNCIKAQYG

Query:  GPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPESIDSWKELEREFLNCFY
        GP Q   LYSK YTKRIDNLRMP GYQPPKFQQFDGKGNPKQH+ HF+ETCE  GT+ DLLVKQFVRTLKGNAFDWY DLEPESID+W++LER+FLN FY
Subjt:  GPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPESIDSWKELEREFLNCFY

Query:  DTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSISSREIQDLILPNMRKEG
         TRR VSM ELTNT+Q+KGELV+NYINRWRA+SLDCKDRLTELS+VEMC Q MHW LLYIL+GIKP TFEELATRAHDMELSI++R  +D ++P  R + 
Subjt:  DTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSISSREIQDLILPNMRKEG

Query:  RNNEET-------IEESMVVNKTLPKSSSKEKRPTNGTHH-------LTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKCKRPEEMEKVNDPKYCKY
           ++T       I+ESMVV+ T  KS SK K       H        TLKERQ+K+YPF D+D+ DMLEQLLE QLI+LP+CKRPE+ EKV+DP YCKY
Subjt:  RNNEET-------IEESMVVNKTLPKSSSKEKRPTNGTHH-------LTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKCKRPEEMEKVNDPKYCKY

Query:  HRVIGHQVERCFILKDLILKLAMEGKLELDLDE
        HRVI H VE+CF+LK+LILKLA E K+ELD+DE
Subjt:  HRVIGHQVERCFILKDLILKLAMEGKLELDLDE

KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.9e-17753.34Show/hide
Query:  PDYKIVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLSIQQLQDMITNCIK
        P   I++VM+T   T E RMAE+++ +N LMK +EE+D +I  LK+ IE++  AESS    +KN DKGK ++Q+ QPQ STSI SLS+QQLQ+MI + IK
Subjt:  PDYKIVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLSIQQLQDMITNCIK

Query:  AQYGGPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPESIDSWKELEREFL
         QYGGP Q   LY K YTKRIDNLRMP GYQPPKFQQFDGKGNPKQH+ HF++TCE  GT+ DLLVKQFVRTLKGNA DWY DLEPESID+W++LER+FL
Subjt:  AQYGGPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPESIDSWKELEREFL

Query:  NCFYDTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSISSREIQDLILPNM
        N FY TR  VSM ELTNT+Q+KGELV++YINRWRA+SLDCKDRLTELS+VEMC Q MHW LLYIL+GIKP TFEELATRAHDMELSI++R  +D ++P  
Subjt:  NCFYDTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSISSREIQDLILPNM

Query:  RKEGRNNEET-------IEESMVVNKTLPKSSSKEKRPTNGTHH-------LTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKCKRPEEMEKVNDPK
        R +    ++T       I+ESMVV+ T  KS SK K       H        TLKERQ+K+YPF D+D+ DMLEQLLE QLI+LP+CKRPE+  KV+DP 
Subjt:  RKEGRNNEET-------IEESMVVNKTLPKSSSKEKRPTNGTHH-------LTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKCKRPEEMEKVNDPK

Query:  YCKYHRVIGHQVERCFILKDLILKLAMEGKLELDLDE---------------------------------------------------------------
        YCKYHRVI H VE+CF+LK+LILKLA E K+ELD+DE                                                               
Subjt:  YCKYHRVIGHQVERCFILKDLILKLAMEGKLELDLDE---------------------------------------------------------------

Query:  ---------------KRLTILRRVNKGLPSWIASSL-QLLVLRCSKEENQCLASTFTRPSTFQRLSVSTSKKSQSSTSVFDRLKITNDRPRRKINNLDVK
                       +R ++  R+    PS   SS+ Q L +   +EENQC    +TR ST +RLS+ST KK + STS FDRLK+TND+ +R++ +   K
Subjt:  ---------------KRLTILRRVNKGLPSWIASSL-QLLVLRCSKEENQCLASTFTRPSTFQRLSVSTSKKSQSSTSVFDRLKITNDRPRRKINNLDVK

Query:  YFNEVCSDKKLKSSIPSRMKRKFYVLINTEGSLKVKPNLIILTNPTSQGSKQDHDEDK
         F E   D K+ S +PSRMKRK +V INTEGSL VKP  II TNPT++G +Q   E+K
Subjt:  YFNEVCSDKKLKSSIPSRMKRKFYVLINTEGSLKVKPNLIILTNPTSQGSKQDHDEDK

TYK03695.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.5e-16147.29Show/hide
Query:  PDYKIVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLSIQQLQDMITNCIK
        P   I++VM+T   T E RMAE+++ +N LMK +EE+D +I  LK+ IE++  AESS    +KN DKGK ++Q+ QPQ STSI SLS+QQLQ+MI + IK
Subjt:  PDYKIVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLSIQQLQDMITNCIK

Query:  AQYGGPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPESIDSWKELEREFL
         QYGGP Q   LYSK YTKRIDNLRMP GYQPPKFQQFDGKGNPKQH+ HF+ETCE  GT+ DLLVKQFVRTLKGNAFD Y DLEPESID+W++LER+FL
Subjt:  AQYGGPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPESIDSWKELEREFL

Query:  NCFYDTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSISSREIQDLILPNM
        N FY TRR VSM ELTNT+Q+KGELV++YINRWRA+SLDCKDRLTELS+VEMC Q MHW LLYIL+GIKP TFEELATRAHDMELSI +R  +D ++P  
Subjt:  NCFYDTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSISSREIQDLILPNM

Query:  RKEGRNNEET-------IEESMVVNKTLPKSSSKEKRPTNGTHH-------LTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKCKRPEEMEKVNDPK
        R +     +T       I+ESMVV+ T  KS SK K       H        TLKERQ+K+YPFSD+D+ DMLEQLLE QLI+LPKCKRP++ EKV+DP 
Subjt:  RKEGRNNEET-------IEESMVVNKTLPKSSSKEKRPTNGTHH-------LTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKCKRPEEMEKVNDPK

Query:  YCKYHRVIGHQVERCFILKDLILKLAMEGKLELDLDE--------------------------------------KRLTILRRVNKGL------PSWI--
        YCKYHRVI H VE+CF+LK+LILKLA E K+EL++DE                                      +R+  +   NK          WI  
Subjt:  YCKYHRVIGHQVERCFILKDLILKLAMEGKLELDLDE--------------------------------------KRLTILRRVNKGL------PSWI--

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------ASSLQLLVLRCSKEENQCLASTFTRPSTFQRLSVSTSKKSQSSTSVFDRLKITNDRPRRKINNLDVKYFNEVCSDKKL
                              +S  Q L +   +EENQC    +TR STF+RLS+S SKK++ STS FDRLK+TND+ +R++ +L  K F E   D K+
Subjt:  ----------------------ASSLQLLVLRCSKEENQCLASTFTRPSTFQRLSVSTSKKSQSSTSVFDRLKITNDRPRRKINNLDVKYFNEVCSDKKL

Query:  KSSIPSRMKRKFYVLINTE
         S +PSRMKRK  V INT+
Subjt:  KSSIPSRMKRKFYVLINTE

TYK18586.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.9e-15764Show/hide
Query:  KYNPLFE------PDYKIVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLS
        K+N L E      P   I++VM+T+    E+RMAE+++ +N LMK +EE+D +I  LK+ IE++  AESS    +KN DKGK ++Q+ QPQ STSI SLS
Subjt:  KYNPLFE------PDYKIVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLS

Query:  IQQLQDMITNCIKAQYGGPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPE
        +QQLQ+MI + IK QYGGP Q   LYSK YTKRIDNLRMP GYQPPKFQQFDGKGNPKQH+ HF+ETCE  GT+ DLLVKQFVRTLKGNAFDWY DLEPE
Subjt:  IQQLQDMITNCIKAQYGGPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPE

Query:  SIDSWKELEREFLNCFYDTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSI
        SID+W++LER+FLN FY TRR VSM ELTNT+Q+KGELV++YINRWRA+SLDCKDRLTELS+VEMC Q MHW LLYIL+GIKP TFEELATRAHDMELSI
Subjt:  SIDSWKELEREFLNCFYDTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSI

Query:  SSREIQDLILPNMRKEGRNNEET-------IEESMVVNKTLPKSSSKEKRPTNGTHH-------LTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKC
        ++R  +D ++P  R +    ++T       I+ESMVV+ T  KS SK K       H        TLKERQ+K+YPF D+D+ DMLEQLLE QLI+LP+C
Subjt:  SSREIQDLILPNMRKEGRNNEET-------IEESMVVNKTLPKSSSKEKRPTNGTHH-------LTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKC

Query:  KRPEEMEKVNDPKYCKYHRVIGHQVERCFILKDLILKLAMEGKLELDLDE
        KRPE+  KV+DP YCKYHRVI H VE+CF+LK+LILKLA E K+ELD+DE
Subjt:  KRPEEMEKVNDPKYCKYHRVIGHQVERCFILKDLILKLAMEGKLELDLDE

TrEMBL top hitse value%identityAlignment
A0A5A7TZU9 Ribonuclease H1.2e-15966.44Show/hide
Query:  PDYKIVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLSIQQLQDMITNCIK
        P   I++VM+T+  T E+RMAE+++ +N LMKA+EE+D +I  LK+ IE++  AESS T  IKN +KGK I+Q+ QPQ STSI SLS+QQLQ+MI N IK
Subjt:  PDYKIVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLSIQQLQDMITNCIK

Query:  AQYGGPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPESIDSWKELEREFL
         QYGGP Q   LYSK YTKRIDN+RMP GYQPPKFQQFDGKGNPKQH+ HF+ETCE  GT+ DLLVKQFVRTLKGNAFDWYTDLEPESIDSW++LER+FL
Subjt:  AQYGGPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPESIDSWKELEREFL

Query:  NCFYDTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSISSREIQDLILPNM
        N FY TRR VSM ELT TKQRKGE V++YINRWRA+SLDCKDRLTELS+VEMC Q MHW LLYIL+GIKP TFEELATRAHDMELSI++R   DL++P +
Subjt:  NCFYDTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSISSREIQDLILPNM

Query:  RKEGRNNEET-------IEESMVVNKTLPKSSSKEKR-----PTNGTHHLTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKCKRPEEMEKVNDPKYC
        RKE +  + T        +E+MVV+ T  K  SKEK+             TLKERQ+K+YPF D+D+PDML+QLLE QLI+LP+CKRP EM +VNDP YC
Subjt:  RKEGRNNEET-------IEESMVVNKTLPKSSSKEKR-----PTNGTHHLTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKCKRPEEMEKVNDPKYC

Query:  KYHRVIGHQVERCFILKDLILKLAMEGKLELDLDE
        KYHRVI H VE+CF+LK+LILKLA++ K+EL+LD+
Subjt:  KYHRVIGHQVERCFILKDLILKLAMEGKLELDLDE

A0A5A7TZU9 Ribonuclease H3.5e-0736.22Show/hide
Query:  SSLQLLVLRCSKEENQCLASTFTRPSTFQRLSVSTSK-KSQSST-----SVFDRLKITNDRPRRKINNLDVKYFNEVCSDKKLKSSIPSRMKRKFYVLIN
        S  Q +    +K+ NQ    + TR S FQRL+ S  K +S S T     S F RL ++  R ++K +       + V  D++++S+ PSRMKRK +V +N
Subjt:  SSLQLLVLRCSKEENQCLASTFTRPSTFQRLSVSTSK-KSQSST-----SVFDRLKITNDRPRRKINNLDVKYFNEVCSDKKLKSSIPSRMKRKFYVLIN

Query:  TEGSLKVKPNLIILTNPTSQGSKQDHD
        TEGSLKVK + ++ T P     + + D
Subjt:  TEGSLKVKPNLIILTNPTSQGSKQDHD

A0A5A7TZU9 Ribonuclease H1.3e-15866.05Show/hide
Query:  IVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLSIQQLQDMITNCIKAQYG
        I++VM+T   T E RMAE+++ +N LMK +EE+D +I  LK+ IE++  AESS   ++KN DKGK ++Q+ QPQ STSI SLS+QQLQ+MI + IK QYG
Subjt:  IVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLSIQQLQDMITNCIKAQYG

Query:  GPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPESIDSWKELEREFLNCFY
        GP Q   LYSK YTKRIDNLRMP GYQPPKFQQFDGKGNPKQH+ HF+ETCE  GT+ DLLVKQFVRTLKGNAFDWY DLEPESID+W++LER+FLN FY
Subjt:  GPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPESIDSWKELEREFLNCFY

Query:  DTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSISSREIQDLILPNMRKEG
         TRR VSM ELTNT+Q+KGELV+NYINRWRA+SLDCKDRLTELS+VEMC Q MHW LLYIL+GIKP TFEELATRAHDMELSI++R  +D ++P  R + 
Subjt:  DTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSISSREIQDLILPNMRKEG

Query:  RNNEET-------IEESMVVNKTLPKSSSKEKRPTNGTHH-------LTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKCKRPEEMEKVNDPKYCKY
           ++T       I+ESMVV+ T  KS SK K       H        TLKERQ+K+YPF D+D+ DMLEQLLE QLI+LP+CKRPE+ EKV+DP YCKY
Subjt:  RNNEET-------IEESMVVNKTLPKSSSKEKRPTNGTHH-------LTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKCKRPEEMEKVNDPKYCKY

Query:  HRVIGHQVERCFILKDLILKLAMEGKLELDLDE
        HRVI H VE+CF+LK+LILKLA E K+ELD+DE
Subjt:  HRVIGHQVERCFILKDLILKLAMEGKLELDLDE

A0A5A7URH1 Ty3-gypsy retrotransposon protein9.4e-17853.34Show/hide
Query:  PDYKIVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLSIQQLQDMITNCIK
        P   I++VM+T   T E RMAE+++ +N LMK +EE+D +I  LK+ IE++  AESS    +KN DKGK ++Q+ QPQ STSI SLS+QQLQ+MI + IK
Subjt:  PDYKIVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLSIQQLQDMITNCIK

Query:  AQYGGPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPESIDSWKELEREFL
         QYGGP Q   LY K YTKRIDNLRMP GYQPPKFQQFDGKGNPKQH+ HF++TCE  GT+ DLLVKQFVRTLKGNA DWY DLEPESID+W++LER+FL
Subjt:  AQYGGPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPESIDSWKELEREFL

Query:  NCFYDTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSISSREIQDLILPNM
        N FY TR  VSM ELTNT+Q+KGELV++YINRWRA+SLDCKDRLTELS+VEMC Q MHW LLYIL+GIKP TFEELATRAHDMELSI++R  +D ++P  
Subjt:  NCFYDTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSISSREIQDLILPNM

Query:  RKEGRNNEET-------IEESMVVNKTLPKSSSKEKRPTNGTHH-------LTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKCKRPEEMEKVNDPK
        R +    ++T       I+ESMVV+ T  KS SK K       H        TLKERQ+K+YPF D+D+ DMLEQLLE QLI+LP+CKRPE+  KV+DP 
Subjt:  RKEGRNNEET-------IEESMVVNKTLPKSSSKEKRPTNGTHH-------LTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKCKRPEEMEKVNDPK

Query:  YCKYHRVIGHQVERCFILKDLILKLAMEGKLELDLDE---------------------------------------------------------------
        YCKYHRVI H VE+CF+LK+LILKLA E K+ELD+DE                                                               
Subjt:  YCKYHRVIGHQVERCFILKDLILKLAMEGKLELDLDE---------------------------------------------------------------

Query:  ---------------KRLTILRRVNKGLPSWIASSL-QLLVLRCSKEENQCLASTFTRPSTFQRLSVSTSKKSQSSTSVFDRLKITNDRPRRKINNLDVK
                       +R ++  R+    PS   SS+ Q L +   +EENQC    +TR ST +RLS+ST KK + STS FDRLK+TND+ +R++ +   K
Subjt:  ---------------KRLTILRRVNKGLPSWIASSL-QLLVLRCSKEENQCLASTFTRPSTFQRLSVSTSKKSQSSTSVFDRLKITNDRPRRKINNLDVK

Query:  YFNEVCSDKKLKSSIPSRMKRKFYVLINTEGSLKVKPNLIILTNPTSQGSKQDHDEDK
         F E   D K+ S +PSRMKRK +V INTEGSL VKP  II TNPT++G +Q   E+K
Subjt:  YFNEVCSDKKLKSSIPSRMKRKFYVLINTEGSLKVKPNLIILTNPTSQGSKQDHDEDK

A0A5D3BX77 Retrotransposon gag protein7.2e-16247.29Show/hide
Query:  PDYKIVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLSIQQLQDMITNCIK
        P   I++VM+T   T E RMAE+++ +N LMK +EE+D +I  LK+ IE++  AESS    +KN DKGK ++Q+ QPQ STSI SLS+QQLQ+MI + IK
Subjt:  PDYKIVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLSIQQLQDMITNCIK

Query:  AQYGGPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPESIDSWKELEREFL
         QYGGP Q   LYSK YTKRIDNLRMP GYQPPKFQQFDGKGNPKQH+ HF+ETCE  GT+ DLLVKQFVRTLKGNAFD Y DLEPESID+W++LER+FL
Subjt:  AQYGGPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPESIDSWKELEREFL

Query:  NCFYDTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSISSREIQDLILPNM
        N FY TRR VSM ELTNT+Q+KGELV++YINRWRA+SLDCKDRLTELS+VEMC Q MHW LLYIL+GIKP TFEELATRAHDMELSI +R  +D ++P  
Subjt:  NCFYDTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSISSREIQDLILPNM

Query:  RKEGRNNEET-------IEESMVVNKTLPKSSSKEKRPTNGTHH-------LTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKCKRPEEMEKVNDPK
        R +     +T       I+ESMVV+ T  KS SK K       H        TLKERQ+K+YPFSD+D+ DMLEQLLE QLI+LPKCKRP++ EKV+DP 
Subjt:  RKEGRNNEET-------IEESMVVNKTLPKSSSKEKRPTNGTHH-------LTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKCKRPEEMEKVNDPK

Query:  YCKYHRVIGHQVERCFILKDLILKLAMEGKLELDLDE--------------------------------------KRLTILRRVNKGL------PSWI--
        YCKYHRVI H VE+CF+LK+LILKLA E K+EL++DE                                      +R+  +   NK          WI  
Subjt:  YCKYHRVIGHQVERCFILKDLILKLAMEGKLELDLDE--------------------------------------KRLTILRRVNKGL------PSWI--

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------ASSLQLLVLRCSKEENQCLASTFTRPSTFQRLSVSTSKKSQSSTSVFDRLKITNDRPRRKINNLDVKYFNEVCSDKKL
                              +S  Q L +   +EENQC    +TR STF+RLS+S SKK++ STS FDRLK+TND+ +R++ +L  K F E   D K+
Subjt:  ----------------------ASSLQLLVLRCSKEENQCLASTFTRPSTFQRLSVSTSKKSQSSTSVFDRLKITNDRPRRKINNLDVKYFNEVCSDKKL

Query:  KSSIPSRMKRKFYVLINTE
         S +PSRMKRK  V INT+
Subjt:  KSSIPSRMKRKFYVLINTE

A0A5D3D4X3 Ty3-gypsy retrotransposon protein1.4e-15764Show/hide
Query:  KYNPLFE------PDYKIVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLS
        K+N L E      P   I++VM+T+    E+RMAE+++ +N LMK +EE+D +I  LK+ IE++  AESS    +KN DKGK ++Q+ QPQ STSI SLS
Subjt:  KYNPLFE------PDYKIVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLS

Query:  IQQLQDMITNCIKAQYGGPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPE
        +QQLQ+MI + IK QYGGP Q   LYSK YTKRIDNLRMP GYQPPKFQQFDGKGNPKQH+ HF+ETCE  GT+ DLLVKQFVRTLKGNAFDWY DLEPE
Subjt:  IQQLQDMITNCIKAQYGGPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPE

Query:  SIDSWKELEREFLNCFYDTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSI
        SID+W++LER+FLN FY TRR VSM ELTNT+Q+KGELV++YINRWRA+SLDCKDRLTELS+VEMC Q MHW LLYIL+GIKP TFEELATRAHDMELSI
Subjt:  SIDSWKELEREFLNCFYDTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSI

Query:  SSREIQDLILPNMRKEGRNNEET-------IEESMVVNKTLPKSSSKEKRPTNGTHH-------LTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKC
        ++R  +D ++P  R +    ++T       I+ESMVV+ T  KS SK K       H        TLKERQ+K+YPF D+D+ DMLEQLLE QLI+LP+C
Subjt:  SSREIQDLILPNMRKEGRNNEET-------IEESMVVNKTLPKSSSKEKRPTNGTHH-------LTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKC

Query:  KRPEEMEKVNDPKYCKYHRVIGHQVERCFILKDLILKLAMEGKLELDLDE
        KRPE+  KV+DP YCKYHRVI H VE+CF+LK+LILKLA E K+ELD+DE
Subjt:  KRPEEMEKVNDPKYCKYHRVIGHQVERCFILKDLILKLAMEGKLELDLDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGACAAAGGCGCTTCTAATATTTTGCCAAAAACCCAACACCAACGAGGTGCAGCAACATTGTCCTCACAGTGGTCGCCATTGCTTAAACACCGAGGAGGTGAAAG
AGAAAAGAGATTGGAATGGTGCAACAATGGAAGAATAGTCTCTCCTCCATCAACTCGACCTCTTGGAATAACATCTGTAAAATACGGCTGCTTCTCCTCATCGGAAGACG
ACGACGGCCATGACGACAACGAGCTGTTGGGGCCGGAGCAAGCGGAGGTGAGGGGGGTTGGGGTTGGAGGGGAAAAAATAGAAAGATGCCAAGAAACAACCTTGCAGGGG
GCATATACTAATGACAAGTTTCTTATTAAGTATAACCCTTTGTTTGAACCTGATTATAAGATAGTGACTGTCATGATGACTGAGACAAGAACTATGGAAGAAAGAATGGC
TGAGATGCAGGAACACATCAACACCTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATCGTGCAACTAAAGAGCCAAATTGAGAACCAACATATCGCCGAATCAAGTC
AAACCCAAGTCATAAAAAATCATGACAAAGGAAAGACTATAGTGCAAGATGATCAGCCACAGTGTTCTACTTCGATCACTTCACTATCTATCCAACAGCTCCAAGATATG
ATCACAAACTGTATCAAAGCTCAGTACGGTGGACCTACTCAAGATTCCCTCTTGTATTCCAAACATTATACTAAGAGGATTGATAACTTGAGAATGCCAATCGGGTATCA
GCCACCGAAATTTCAGCAGTTTGATGGAAAAGGCAATCCTAAACAACATATTGGCCACTTCGTTGAGACATGCGAGAACGTTGGTACTCAAGATGACCTACTAGTCAAAC
AGTTCGTTCGAACACTTAAAGGAAATGCTTTTGACTGGTACACTGATCTAGAACCTGAGTCAATAGACAGTTGGAAGGAACTCGAAAGAGAGTTTTTGAATTGCTTCTAC
GACACTAGACGAACCGTTAGCATGTTCGAGCTCACCAACACTAAACAACGAAAAGGTGAACTCGTTGTTAACTATATAAATCGTTGGAGAGCCATGAGTCTAGATTGCAA
AGATCGTCTCACTGAACTCTCTTCCGTTGAGATGTGCATTCAAGACATGCACTGGGAACTCCTCTACATCCTTAAAGGTATAAAGCCTCACACCTTTGAAGAACTTGCAA
CTCGCGCCCACGATATGGAGCTAAGTATTTCTAGTCGAGAAATTCAAGACCTTATACTCCCTAACATGAGGAAAGAAGGAAGGAACAACGAAGAGACTATAGAAGAATCT
ATGGTTGTAAACAAAACCCTTCCCAAGTCGTCTTCGAAAGAAAAACGACCAACAAATGGAACACATCACTTAACTTTAAAGGAAAGACAGAAGAAAATCTATCCTTTCTC
TGATGCCGACATCCCTGATATGTTGGAACAACTACTAGAAGTGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCAATGATCCCAAGTATT
GCAAGTATCATCGAGTTATTGGTCATCAAGTGGAAAGATGTTTCATCCTAAAGGACTTAATTCTAAAGCTAGCTATGGAAGGAAAACTTGAGCTCGACCTTGATGAAAAG
AGGTTGACAATTCTGAGAAGGGTGAACAAAGGACTTCCGTCTTGGATCGCATCAAGCCTTCAATTACTCGTCCTTCGGTGTTCCAAAGAAGAAAATCAATGTTTGGCGTC
CACCTTCACTCGACCTTCAACTTTCCAAAGGCTAAGTGTCTCCACATCAAAGAAAAGTCAATCTTCAACATCTGTCTTTGATCGCCTCAAAATAACAAACGATCGGCCTC
GAAGAAAGATAAATAACTTAGATGTGAAATATTTCAATGAAGTATGCAGTGATAAGAAGCTTAAAAGTAGCATCCCGTCACGTATGAAGAGGAAGTTCTATGTTCTCATA
AATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAATCCTACAAGTCAAGGATCCAAGCAAGACCATGATGAAGATAAGGGCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGACAAAGGCGCTTCTAATATTTTGCCAAAAACCCAACACCAACGAGGTGCAGCAACATTGTCCTCACAGTGGTCGCCATTGCTTAAACACCGAGGAGGTGAAAG
AGAAAAGAGATTGGAATGGTGCAACAATGGAAGAATAGTCTCTCCTCCATCAACTCGACCTCTTGGAATAACATCTGTAAAATACGGCTGCTTCTCCTCATCGGAAGACG
ACGACGGCCATGACGACAACGAGCTGTTGGGGCCGGAGCAAGCGGAGGTGAGGGGGGTTGGGGTTGGAGGGGAAAAAATAGAAAGATGCCAAGAAACAACCTTGCAGGGG
GCATATACTAATGACAAGTTTCTTATTAAGTATAACCCTTTGTTTGAACCTGATTATAAGATAGTGACTGTCATGATGACTGAGACAAGAACTATGGAAGAAAGAATGGC
TGAGATGCAGGAACACATCAACACCTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATCGTGCAACTAAAGAGCCAAATTGAGAACCAACATATCGCCGAATCAAGTC
AAACCCAAGTCATAAAAAATCATGACAAAGGAAAGACTATAGTGCAAGATGATCAGCCACAGTGTTCTACTTCGATCACTTCACTATCTATCCAACAGCTCCAAGATATG
ATCACAAACTGTATCAAAGCTCAGTACGGTGGACCTACTCAAGATTCCCTCTTGTATTCCAAACATTATACTAAGAGGATTGATAACTTGAGAATGCCAATCGGGTATCA
GCCACCGAAATTTCAGCAGTTTGATGGAAAAGGCAATCCTAAACAACATATTGGCCACTTCGTTGAGACATGCGAGAACGTTGGTACTCAAGATGACCTACTAGTCAAAC
AGTTCGTTCGAACACTTAAAGGAAATGCTTTTGACTGGTACACTGATCTAGAACCTGAGTCAATAGACAGTTGGAAGGAACTCGAAAGAGAGTTTTTGAATTGCTTCTAC
GACACTAGACGAACCGTTAGCATGTTCGAGCTCACCAACACTAAACAACGAAAAGGTGAACTCGTTGTTAACTATATAAATCGTTGGAGAGCCATGAGTCTAGATTGCAA
AGATCGTCTCACTGAACTCTCTTCCGTTGAGATGTGCATTCAAGACATGCACTGGGAACTCCTCTACATCCTTAAAGGTATAAAGCCTCACACCTTTGAAGAACTTGCAA
CTCGCGCCCACGATATGGAGCTAAGTATTTCTAGTCGAGAAATTCAAGACCTTATACTCCCTAACATGAGGAAAGAAGGAAGGAACAACGAAGAGACTATAGAAGAATCT
ATGGTTGTAAACAAAACCCTTCCCAAGTCGTCTTCGAAAGAAAAACGACCAACAAATGGAACACATCACTTAACTTTAAAGGAAAGACAGAAGAAAATCTATCCTTTCTC
TGATGCCGACATCCCTGATATGTTGGAACAACTACTAGAAGTGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCAATGATCCCAAGTATT
GCAAGTATCATCGAGTTATTGGTCATCAAGTGGAAAGATGTTTCATCCTAAAGGACTTAATTCTAAAGCTAGCTATGGAAGGAAAACTTGAGCTCGACCTTGATGAAAAG
AGGTTGACAATTCTGAGAAGGGTGAACAAAGGACTTCCGTCTTGGATCGCATCAAGCCTTCAATTACTCGTCCTTCGGTGTTCCAAAGAAGAAAATCAATGTTTGGCGTC
CACCTTCACTCGACCTTCAACTTTCCAAAGGCTAAGTGTCTCCACATCAAAGAAAAGTCAATCTTCAACATCTGTCTTTGATCGCCTCAAAATAACAAACGATCGGCCTC
GAAGAAAGATAAATAACTTAGATGTGAAATATTTCAATGAAGTATGCAGTGATAAGAAGCTTAAAAGTAGCATCCCGTCACGTATGAAGAGGAAGTTCTATGTTCTCATA
AATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAATCCTACAAGTCAAGGATCCAAGCAAGACCATGATGAAGATAAGGGCTTTTAA
Protein sequenceShow/hide protein sequence
MWDKGASNILPKTQHQRGAATLSSQWSPLLKHRGGEREKRLEWCNNGRIVSPPSTRPLGITSVKYGCFSSSEDDDGHDDNELLGPEQAEVRGVGVGGEKIERCQETTLQG
AYTNDKFLIKYNPLFEPDYKIVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIVQLKSQIENQHIAESSQTQVIKNHDKGKTIVQDDQPQCSTSITSLSIQQLQDM
ITNCIKAQYGGPTQDSLLYSKHYTKRIDNLRMPIGYQPPKFQQFDGKGNPKQHIGHFVETCENVGTQDDLLVKQFVRTLKGNAFDWYTDLEPESIDSWKELEREFLNCFY
DTRRTVSMFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQDMHWELLYILKGIKPHTFEELATRAHDMELSISSREIQDLILPNMRKEGRNNEETIEES
MVVNKTLPKSSSKEKRPTNGTHHLTLKERQKKIYPFSDADIPDMLEQLLEVQLIELPKCKRPEEMEKVNDPKYCKYHRVIGHQVERCFILKDLILKLAMEGKLELDLDEK
RLTILRRVNKGLPSWIASSLQLLVLRCSKEENQCLASTFTRPSTFQRLSVSTSKKSQSSTSVFDRLKITNDRPRRKINNLDVKYFNEVCSDKKLKSSIPSRMKRKFYVLI
NTEGSLKVKPNLIILTNPTSQGSKQDHDEDKGF