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Lag0041836 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041836
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRegulator of rDNA transcription protein 15
Genome locationchr13:28968636..28969237
RNA-Seq ExpressionLag0041836
SyntenyLag0041836
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7025184.1 unnamed protein product [Microthlaspi erraticum]8.3e-4457.63Show/hide
Query:  MPSSFPWLWFRWIVHKDSGNLVNPFMRGPSQCFVLIKQSDSPCPGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGF--------------------
        +PS FPWLWFRW   +     VNPF          I +     PGK P+  VPSPS GR AA+      SSSSPP ADGF                    
Subjt:  MPSSFPWLWFRWIVHKDSGNLVNPFMRGPSQCFVLIKQSDSPCPGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGF--------------------

Query:  ILLTSLAYIVPSTRGCSPWRPDAVMSTTGRGRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVKKKR
        IL TSLAYIVPSTRGCSPWRPDAVMSTTGR RHSVL+IFKG R    HHATCGA+PA GPYL L+RFQGGQAVK+KR
Subjt:  ILLTSLAYIVPSTRGCSPWRPDAVMSTTGRGRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVKKKR

PHT27037.1 Regulator of rDNA transcription protein 15 [Capsicum baccatum]9.8e-4562.94Show/hide
Query:  RWIVHKDSGNLVNPFMRGPSQCFVLIKQSDSPC---PGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGF--------------------ILLTSLA
        R +V +DSGNL NPF+R P     L++ S        GKAP+  VPSPS GR AAT      SSSSPP ADGF                    IL TSLA
Subjt:  RWIVHKDSGNLVNPFMRGPSQCFVLIKQSDSPC---PGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGF--------------------ILLTSLA

Query:  YIVPSTRGCSPWRPDAVMSTTGRGRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVKKKR
        YIVPSTRGCSPWRPDAVMSTTGRGRHSVL+IFKG R R GHHATCGALPA GPYL LSRFQGGQAVK+KR
Subjt:  YIVPSTRGCSPWRPDAVMSTTGRGRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVKKKR

PHT28719.1 hypothetical protein CQW23_31698 [Capsicum baccatum]1.9e-4862.36Show/hide
Query:  MPSSFPWLWFRWIVHKDSGNLVNPFMRGP--SQCFVLIKQSDSPCPGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGF------------------
        M S FPWLWF WIV +DSGNLVNPF+R P     F L  +      GK P+  VPSPS GR AAT      SSSSPP ADGF                  
Subjt:  MPSSFPWLWFRWIVHKDSGNLVNPFMRGP--SQCFVLIKQSDSPCPGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGF------------------

Query:  --ILLTSLAYIVPSTRGCSPWRPDAVMSTTGRGRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVKKK
          IL T LAYIVPSTRGCSPWRPDAVMSTTG GRHS L IFKGCR   GHHATCGAL A GPYL LSRFQGGQAVK+K
Subjt:  --ILLTSLAYIVPSTRGCSPWRPDAVMSTTGRGRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVKKK

PHT73968.1 hypothetical protein T459_21245 [Capsicum annuum]4.1e-4362.42Show/hide
Query:  IVHKDSGNLVNPFMRGPSQCFVLIKQSDSPC---PGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGF--------------------ILLTSLAYI
        IV ++SGNLVNPF+R P     L++ S        GKAP+  VPSPS GR AAT   C  SSSSPPKADGF                    IL T LAYI
Subjt:  IVHKDSGNLVNPFMRGPSQCFVLIKQSDSPC---PGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGF--------------------ILLTSLAYI

Query:  VPSTRGCSPWRPDAVMSTTGRGRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVK
         PSTRGCSPWRPDAVM TTGRGRHSVL+IFKG R R GHHATC ALPA GPYL LSRFQGGQAVK
Subjt:  VPSTRGCSPWRPDAVMSTTGRGRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVK

TKS17491.1 putative senescence-associated protein [Populus alba]7.8e-4261.21Show/hide
Query:  KDSGNLVNPFMRGPSQCFVLIKQSDSPC---PGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGF--------------------ILLTSLAYIVPS
        K    L++P +  PS    L++ S       PGKAP+ AVPSPS GR A T      SSSSPP ADGF                    IL TSLAYIVPS
Subjt:  KDSGNLVNPFMRGPSQCFVLIKQSDSPC---PGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGF--------------------ILLTSLAYIVPS

Query:  TRGCSPWRPDAVMSTTGRGRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVKKKR
        TRGCSPWRPDAVMSTTGRGRHSVL+IFKG RGR GHHATCGALPA GPYL LSRFQGG+AVK+KR
Subjt:  TRGCSPWRPDAVMSTTGRGRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVKKKR

TrEMBL top hitse value%identityAlignment
A0A2G2V266 Regulator of rDNA transcription protein 154.8e-4562.94Show/hide
Query:  RWIVHKDSGNLVNPFMRGPSQCFVLIKQSDSPC---PGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGF--------------------ILLTSLA
        R +V +DSGNL NPF+R P     L++ S        GKAP+  VPSPS GR AAT      SSSSPP ADGF                    IL TSLA
Subjt:  RWIVHKDSGNLVNPFMRGPSQCFVLIKQSDSPC---PGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGF--------------------ILLTSLA

Query:  YIVPSTRGCSPWRPDAVMSTTGRGRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVKKKR
        YIVPSTRGCSPWRPDAVMSTTGRGRHSVL+IFKG R R GHHATCGALPA GPYL LSRFQGGQAVK+KR
Subjt:  YIVPSTRGCSPWRPDAVMSTTGRGRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVKKKR

A0A2G2V6Z8 Uncharacterized protein9.3e-4962.36Show/hide
Query:  MPSSFPWLWFRWIVHKDSGNLVNPFMRGP--SQCFVLIKQSDSPCPGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGF------------------
        M S FPWLWF WIV +DSGNLVNPF+R P     F L  +      GK P+  VPSPS GR AAT      SSSSPP ADGF                  
Subjt:  MPSSFPWLWFRWIVHKDSGNLVNPFMRGP--SQCFVLIKQSDSPCPGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGF------------------

Query:  --ILLTSLAYIVPSTRGCSPWRPDAVMSTTGRGRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVKKK
          IL T LAYIVPSTRGCSPWRPDAVMSTTG GRHS L IFKGCR   GHHATCGAL A GPYL LSRFQGGQAVK+K
Subjt:  --ILLTSLAYIVPSTRGCSPWRPDAVMSTTGRGRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVKKK

A0A2G2YW21 Uncharacterized protein2.0e-4362.42Show/hide
Query:  IVHKDSGNLVNPFMRGPSQCFVLIKQSDSPC---PGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGF--------------------ILLTSLAYI
        IV ++SGNLVNPF+R P     L++ S        GKAP+  VPSPS GR AAT   C  SSSSPPKADGF                    IL T LAYI
Subjt:  IVHKDSGNLVNPFMRGPSQCFVLIKQSDSPC---PGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGF--------------------ILLTSLAYI

Query:  VPSTRGCSPWRPDAVMSTTGRGRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVK
         PSTRGCSPWRPDAVM TTGRGRHSVL+IFKG R R GHHATC ALPA GPYL LSRFQGGQAVK
Subjt:  VPSTRGCSPWRPDAVMSTTGRGRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVK

A0A4U5R2P0 Putative senescence-associated protein3.8e-4261.21Show/hide
Query:  KDSGNLVNPFMRGPSQCFVLIKQSDSPC---PGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGF--------------------ILLTSLAYIVPS
        K    L++P +  PS    L++ S       PGKAP+ AVPSPS GR A T      SSSSPP ADGF                    IL TSLAYIVPS
Subjt:  KDSGNLVNPFMRGPSQCFVLIKQSDSPC---PGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGF--------------------ILLTSLAYIVPS

Query:  TRGCSPWRPDAVMSTTGRGRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVKKKR
        TRGCSPWRPDAVMSTTGRGRHSVL+IFKG RGR GHHATCGALPA GPYL LSRFQGG+AVK+KR
Subjt:  TRGCSPWRPDAVMSTTGRGRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVKKKR

A0A6D2IEW3 Uncharacterized protein4.0e-4457.63Show/hide
Query:  MPSSFPWLWFRWIVHKDSGNLVNPFMRGPSQCFVLIKQSDSPCPGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGF--------------------
        +PS FPWLWFRW   +     VNPF          I +     PGK P+  VPSPS GR AA+      SSSSPP ADGF                    
Subjt:  MPSSFPWLWFRWIVHKDSGNLVNPFMRGPSQCFVLIKQSDSPCPGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGF--------------------

Query:  ILLTSLAYIVPSTRGCSPWRPDAVMSTTGRGRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVKKKR
        IL TSLAYIVPSTRGCSPWRPDAVMSTTGR RHSVL+IFKG R    HHATCGA+PA GPYL L+RFQGGQAVK+KR
Subjt:  ILLTSLAYIVPSTRGCSPWRPDAVMSTTGRGRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVKKKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAGCTCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTACACAAGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGGACCATCGCAATGCTTTGTTTTAATTAA
ACAGTCGGATTCCCCTTGTCCGGGGAAGGCTCCCAAGAGAGCCGTTCCCAGTCCGTCCCTCGGCCGGCAGGCGGCGACCCACTATCTCTGCAGATGCAGCTCGAGCAGTC
CACCGAAAGCCGACGGGTTCATTTTGCTGACTTCCCTTGCCTACATTGTTCCATCGACCAGAGGTTGTTCACCTTGGAGACCTGATGCAGTTATGAGTACGACTGGGCGT
GGGAGGCACTCGGTCCTCCAGATTTTCAAGGGCTGTCGGGGGCGCATTGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGTTGGACCCTACCTCTGGCTGAGCCGTTT
CCAGGGTGGGCAGGCTGTTAAAAAGAAAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAGCTCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTACACAAGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGGACCATCGCAATGCTTTGTTTTAATTAA
ACAGTCGGATTCCCCTTGTCCGGGGAAGGCTCCCAAGAGAGCCGTTCCCAGTCCGTCCCTCGGCCGGCAGGCGGCGACCCACTATCTCTGCAGATGCAGCTCGAGCAGTC
CACCGAAAGCCGACGGGTTCATTTTGCTGACTTCCCTTGCCTACATTGTTCCATCGACCAGAGGTTGTTCACCTTGGAGACCTGATGCAGTTATGAGTACGACTGGGCGT
GGGAGGCACTCGGTCCTCCAGATTTTCAAGGGCTGTCGGGGGCGCATTGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGTTGGACCCTACCTCTGGCTGAGCCGTTT
CCAGGGTGGGCAGGCTGTTAAAAAGAAAAGATAA
Protein sequenceShow/hide protein sequence
MPSSFPWLWFRWIVHKDSGNLVNPFMRGPSQCFVLIKQSDSPCPGKAPKRAVPSPSLGRQAATHYLCRCSSSSPPKADGFILLTSLAYIVPSTRGCSPWRPDAVMSTTGR
GRHSVLQIFKGCRGRIGHHATCGALPAVGPYLWLSRFQGGQAVKKKR