; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041847 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041847
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr13:29355599..29357761
RNA-Seq ExpressionLag0041847
SyntenyLag0041847
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8813692.1 hypothetical protein D1007_09196 [Hordeum vulgare]2.4e-0728.99Show/hide
Query:  FSSDRFTW-SRNKNSFEATKERLDKFFANSEMLSKATRIKVEHLQFHHSDHRPLLLDISWEKFQRQAASGRILKFEESWVSHEGSKNALADSWKDTTEVT
        ++ DRFTW + N+       ERLD+  AN +  +K     V H +  HSDHRPL+++   +  +      R  +FE  W+  +G    + D+W++  +V 
Subjt:  FSSDRFTW-SRNKNSFEATKERLDKFFANSEMLSKATRIKVEHLQFHHSDHRPLLLDISWEKFQRQAASGRILKFEESWVSHEGSKNALADSWKDTTEVT

Query:  NFNFNMKMQKGLAAMNRWNRDRLKGSIKEAIKSKEREI
          N    M+K  A M RW+++ + G +   +K  + E+
Subjt:  NFNFNMKMQKGLAAMNRWNRDRLKGSIKEAIKSKEREI

XP_020672870.1 uncharacterized protein LOC110092589 [Dendrobium catenatum]1.6e-0835.25Show/hide
Query:  RFTWSRNKNSFEATKERLDKFFANSEMLSKATRIKVEHLQFHHSDHRPLLLDISWEKFQRQAASGRILKFEESWVSHEGSKNALADSWKDTTEVTNFN-F
        +FTW  NK       ERLD++  NS+ L++     V HL+   SDH PL+L I  EK  ++    R L++EE W S   SK  +  +W  T +    N  
Subjt:  RFTWSRNKNSFEATKERLDKFFANSEMLSKATRIKVEHLQFHHSDHRPLLLDISWEKFQRQAASGRILKFEESWVSHEGSKNALADSWKDTTEVTNFN-F

Query:  NMKMQKGLAAMNRWNRDRLKG--SIKEAIKSKEREISIL
        N+K ++ L A++ W++ +LK    +KE++K   +EIS L
Subjt:  NMKMQKGLAAMNRWNRDRLKG--SIKEAIKSKEREISIL

XP_020698809.1 uncharacterized protein LOC110111334 [Dendrobium catenatum]4.0e-0730.37Show/hide
Query:  IKEAIKSKEREIRGFRKNGQGTRIALKQPKQPKEREAFS-----------SDRFTWSRNKNSFEATKERLDKFFANSEMLSKATRIKVEHLQFHHSDHRP
        I  A  SKE E RG      G R     P+ P++ + F              +FTW  NK       ERLD+   NS  L+    + V HL    SDH P
Subjt:  IKEAIKSKEREIRGFRKNGQGTRIALKQPKQPKEREAFS-----------SDRFTWSRNKNSFEATKERLDKFFANSEMLSKATRIKVEHLQFHHSDHRP

Query:  LLLDISWEKFQRQAASGRILKFEESWVSHEGSKNALADSWKDTTEVTNF-NFNMKMQKGLAAMNRWNRDR------LKGSIKEAIKSKERE
        + + I   +F++     R LKFEE W+S+  SK  +A+SW   +   +    N+K+++ L A+  W++ +      LK ++K  I S + E
Subjt:  LLLDISWEKFQRQAASGRILKFEESWVSHEGSKNALADSWKDTTEVTNF-NFNMKMQKGLAAMNRWNRDR------LKGSIKEAIKSKERE

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]1.3e-1037.6Show/hide
Query:  ERLDKFFANSEMLSKATRIKVEHLQFHHSDHRPLLLDISWEKFQRQAA----SGRILKFEESWVSHEGSKNALADSWKDTTEVTNFNFNMKMQKGLAAMN
        ERLD+F  N  ML+K   +KV HL+   SDHRP+L   SW+ F+   A      R ++FEESW+  +G ++ +  +W     +    F  K+   L+ +N
Subjt:  ERLDKFFANSEMLSKATRIKVEHLQFHHSDHRPLLLDISWEKFQRQAA----SGRILKFEESWVSHEGSKNALADSWKDTTEVTNFNFNMKMQKGLAAMN

Query:  RWNRDRLKGSIKEAIKSKEREISIL
         WN+ RL  S+K AI  KE+E+  L
Subjt:  RWNRDRLKGSIKEAIKSKEREISIL

XP_042968949.1 uncharacterized protein LOC122301607 [Carya illinoinensis]1.8e-0728.87Show/hide
Query:  FSSDRFTWSRNKNSFEATKERLDKFFANSEMLSKATRIKVEHLQFHHSDHRPLLLDISWEKFQRQAASGRILKFEESWVSHEGSKNALADSWKDTT-EVT
        F  D++TW+ N+     TKERLD+   NS  +       V+HL  + SDH+PLL+ +  +  + +    RI ++E+ W + EG +  +  SWK     + 
Subjt:  FSSDRFTWSRNKNSFEATKERLDKFFANSEMLSKATRIKVEHLQFHHSDHRPLLLDISWEKFQRQAASGRILKFEESWVSHEGSKNALADSWKDTT-EVT

Query:  NFNFNMK-MQKGLAAMNRWNRDRLKGSIKEAIKSKEREISIL
        N    ++ ++    ++N+W++D+ K   +EA++SK + ++ L
Subjt:  NFNFNMK-MQKGLAAMNRWNRDRLKGSIKEAIKSKEREISIL

TrEMBL top hitse value%identityAlignment
A0A2N9FXY6 Uncharacterized protein6.7e-0832.62Show/hide
Query:  FSSDRFTWSRNKNSFEATKERLDKFFANSEMLSKATRIKVEHLQFHHSDHRPLLLDISWEKFQRQAASGRILKFEESWVSHEGSKNALADSWKDTTEVT-
        FS  ++TWS  +      KE LD+   N++      +  V+HL F  SDH P+LLD   EK        R L+FE  W+    S   + D+W+   E + 
Subjt:  FSSDRFTWSRNKNSFEATKERLDKFFANSEMLSKATRIKVEHLQFHHSDHRPLLLDISWEKFQRQAASGRILKFEESWVSHEGSKNALADSWKDTTEVT-

Query:  NFNFNMKMQKGLAAMNRWNRDRLKGSIKEAIKSKEREISIL
        NF    K+Q+   A+ +WN++   G  K  IK  E+ I+ L
Subjt:  NFNFNMKMQKGLAAMNRWNRDRLKGSIKEAIKSKEREISIL

A0A392MA33 Uncharacterized protein (Fragment)5.7e-0731.54Show/hide
Query:  FSSDRFTWSRNKNSFEATKERLDKFFANSEMLSKATRIKVEHLQFHHSDHRPLLLDI-SWEKFQRQAASGRILK-FEESWVSHEGSKNALADSWKDTTEV
        +  D+FTW+ N+ +    KERLD+F A+   ++K  R    HL  + SDH+P+LL   S   F+    S R +K FE  W+        + + W      
Subjt:  FSSDRFTWSRNKNSFEATKERLDKFFANSEMLSKATRIKVEHLQFHHSDHRPLLLDI-SWEKFQRQAASGRILK-FEESWVSHEGSKNALADSWKDTTEV

Query:  TNFNFNMKMQKGLAAMNRWNRDRLKGSIKE
        TNF    K+Q+    ++ W RD    S K+
Subjt:  TNFNFNMKMQKGLAAMNRWNRDRLKGSIKE

A0A6J1DUG8 uncharacterized protein LOC1110241356.5e-1137.6Show/hide
Query:  ERLDKFFANSEMLSKATRIKVEHLQFHHSDHRPLLLDISWEKFQRQAA----SGRILKFEESWVSHEGSKNALADSWKDTTEVTNFNFNMKMQKGLAAMN
        ERLD+F  N  ML+K   +KV HL+   SDHRP+L   SW+ F+   A      R ++FEESW+  +G ++ +  +W     +    F  K+   L+ +N
Subjt:  ERLDKFFANSEMLSKATRIKVEHLQFHHSDHRPLLLDISWEKFQRQAA----SGRILKFEESWVSHEGSKNALADSWKDTTEVTNFNFNMKMQKGLAAMN

Query:  RWNRDRLKGSIKEAIKSKEREISIL
         WN+ RL  S+K AI  KE+E+  L
Subjt:  RWNRDRLKGSIKEAIKSKEREISIL

A0A803PQM1 Uncharacterized protein2.0e-0726.95Show/hide
Query:  FSSDRFTWSRNKNSFEATKERLDKFFANSEMLSKATRIKVEHLQFHHSDHRPLLLDI-SWEKFQRQAASGRILKFEESWVSHEGSKNALADSWKDTTEVT
        F+ + FTW+++++  E  +ERLD  F N   ++    +   HL F+ SDHR + ++I      Q+Q+A     +FE+ W+  E +   + D+WK  T   
Subjt:  FSSDRFTWSRNKNSFEATKERLDKFFANSEMLSKATRIKVEHLQFHHSDHRPLLLDI-SWEKFQRQAASGRILKFEESWVSHEGSKNALADSWKDTTEVT

Query:  NFNFNMKMQKGLAAMNRWNRDRLKGSIKEAIKSKEREISIL
          +F   +     A+ RW+  +  G +K+ I   ++ ++ L
Subjt:  NFNFNMKMQKGLAAMNRWNRDRLKGSIKEAIKSKEREISIL

A0A803QH07 Uncharacterized protein2.0e-0726.95Show/hide
Query:  FSSDRFTWSRNKNSFEATKERLDKFFANSEMLSKATRIKVEHLQFHHSDHRPLLLDI-SWEKFQRQAASGRILKFEESWVSHEGSKNALADSWKDTTEVT
        F+ + FTW++N+N  E  +ERLD  F N   ++    +   HL F+ SDHR + ++I      Q+Q       +FE+ W+  E +   + D+WK      
Subjt:  FSSDRFTWSRNKNSFEATKERLDKFFANSEMLSKATRIKVEHLQFHHSDHRPLLLDI-SWEKFQRQAASGRILKFEESWVSHEGSKNALADSWKDTTEVT

Query:  NFNFNMKMQKGLAAMNRWNRDRLKGSIKEAIKSKEREISIL
          +F   +     A+ RW+  +  G +K+ I   ++ ++ L
Subjt:  NFNFNMKMQKGLAAMNRWNRDRLKGSIKEAIKSKEREISIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATCTTGGAAAAGACGGGCTAGAGAACATCAAATGTAAGACAAGCGGGTTGAAGAAGATAGCCAGAAAAGTGAAAGAAGAAAACACAACAGAGAGGAAGAAGGG
GATGAAAAAGAAAGCAAGAGAGTGTGCAAAGATTACTTCGGGGAAACCATTGGGATATCGGTGGAGGCTGAGAATCAGCCCCGCCGGAGGCCATGAAGTTATTACTTCGG
GGAAACTGTGGGGAATCCTCGGGCGATTCGTTCCCTACGACATGTGGTTTACGTGGTCAAGGAACAAGAATAGCTTTGAAGCAACCAAAGAAAGACTCGACAAATTCTTT
GCAAACTCTGAGATGCTCTCTAAAGCTACAAGAATAAAAGTGGAGCATCTCCAGTTCCATCATTCTGATCATAGGCCCTTATTGCTAGACATTAACTGGGAGAAATTCCA
AAGACAAGCGGCAAGTAGAAGAATTTTAAAGTTTGAGGAAAGTTGGGTTTCCCATGAAGGCAGCAAAAATGCTCTTGCTGATTCCCGGAAAGACACAACCGAAGCTACAA
ACTTTAATTTCAATATGAAGATGCAGAAGGGGTTAGCAGCCATGAATAGATGGAATAGAGACAGATTGAAAGGGTCTATAAAAGAAGCCATTAAATCGAAGGAAAGAGAG
ATCAGAGGCTTTCGCAAAAATGGTCAAGGAACAAGAATAGCTTTGAAGCAACCAAAGCAACCGAAGGAAAGAGAGGCTTTCTCTAGTGACAGGTTTACGTGGTCAAGGAA
CAAAAATAGCTTTGAAGCAACCAAAGAAAGACTCGACAAATTCTTTGCAAACTCTGAGATGCTCTCTAAAGCTACAAGAATAAAAGTGGAGCATCTCCAGTTCCATCATT
CTGATCATAGGCCCTTATTGCTAGACATTAGCTGGGAGAAATTCCAAAGACAAGCGGCAAGCGGAAGAATTTTAAAGTTTGAGGAAAGTTGGGTTTCCCATGAAGGCAGC
AAAAATGCTCTTGCTGATTCCTGGAAAGACACAACCGAAGTTACAAACTTTAATTTCAATATGAAGATGCAGAAGGGGTTAGCAGCCATGAATAGATGGAATAGAGACAG
ATTGAAAGGGTCTATAAAAGAAGCCATTAAATCGAAGGAAAGAGAGATCAGTATTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATCTTGGAAAAGACGGGCTAGAGAACATCAAATGTAAGACAAGCGGGTTGAAGAAGATAGCCAGAAAAGTGAAAGAAGAAAACACAACAGAGAGGAAGAAGGG
GATGAAAAAGAAAGCAAGAGAGTGTGCAAAGATTACTTCGGGGAAACCATTGGGATATCGGTGGAGGCTGAGAATCAGCCCCGCCGGAGGCCATGAAGTTATTACTTCGG
GGAAACTGTGGGGAATCCTCGGGCGATTCGTTCCCTACGACATGTGGTTTACGTGGTCAAGGAACAAGAATAGCTTTGAAGCAACCAAAGAAAGACTCGACAAATTCTTT
GCAAACTCTGAGATGCTCTCTAAAGCTACAAGAATAAAAGTGGAGCATCTCCAGTTCCATCATTCTGATCATAGGCCCTTATTGCTAGACATTAACTGGGAGAAATTCCA
AAGACAAGCGGCAAGTAGAAGAATTTTAAAGTTTGAGGAAAGTTGGGTTTCCCATGAAGGCAGCAAAAATGCTCTTGCTGATTCCCGGAAAGACACAACCGAAGCTACAA
ACTTTAATTTCAATATGAAGATGCAGAAGGGGTTAGCAGCCATGAATAGATGGAATAGAGACAGATTGAAAGGGTCTATAAAAGAAGCCATTAAATCGAAGGAAAGAGAG
ATCAGAGGCTTTCGCAAAAATGGTCAAGGAACAAGAATAGCTTTGAAGCAACCAAAGCAACCGAAGGAAAGAGAGGCTTTCTCTAGTGACAGGTTTACGTGGTCAAGGAA
CAAAAATAGCTTTGAAGCAACCAAAGAAAGACTCGACAAATTCTTTGCAAACTCTGAGATGCTCTCTAAAGCTACAAGAATAAAAGTGGAGCATCTCCAGTTCCATCATT
CTGATCATAGGCCCTTATTGCTAGACATTAGCTGGGAGAAATTCCAAAGACAAGCGGCAAGCGGAAGAATTTTAAAGTTTGAGGAAAGTTGGGTTTCCCATGAAGGCAGC
AAAAATGCTCTTGCTGATTCCTGGAAAGACACAACCGAAGTTACAAACTTTAATTTCAATATGAAGATGCAGAAGGGGTTAGCAGCCATGAATAGATGGAATAGAGACAG
ATTGAAAGGGTCTATAAAAGAAGCCATTAAATCGAAGGAAAGAGAGATCAGTATTCTTTAA
Protein sequenceShow/hide protein sequence
MENLGKDGLENIKCKTSGLKKIARKVKEENTTERKKGMKKKARECAKITSGKPLGYRWRLRISPAGGHEVITSGKLWGILGRFVPYDMWFTWSRNKNSFEATKERLDKFF
ANSEMLSKATRIKVEHLQFHHSDHRPLLLDINWEKFQRQAASRRILKFEESWVSHEGSKNALADSRKDTTEATNFNFNMKMQKGLAAMNRWNRDRLKGSIKEAIKSKERE
IRGFRKNGQGTRIALKQPKQPKEREAFSSDRFTWSRNKNSFEATKERLDKFFANSEMLSKATRIKVEHLQFHHSDHRPLLLDISWEKFQRQAASGRILKFEESWVSHEGS
KNALADSWKDTTEVTNFNFNMKMQKGLAAMNRWNRDRLKGSIKEAIKSKEREISIL