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Lag0041853 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041853
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr13:29405547..29405882
RNA-Seq ExpressionLag0041853
SyntenyLag0041853
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN60536.1 hypothetical protein VITISV_010581 [Vitis vinifera]3.2e-1344.09Show/hide
Query:  KIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLYPPQESPKPFVEGLIGAP
        K E   ++ +E I WRQT KVKW +D DC+ST FH+VA+ RR+KN I  +EN  G++L     I +EI+ +F  LYP        VEG+  +P
Subjt:  KIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLYPPQESPKPFVEGLIGAP

RVW53508.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.7e-1248.19Show/hide
Query:  KIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLY--PPQES
        K E   ++ +E I WRQT KVKW +D DC+ST FH+VA+ RR+KN I  +EN  G++L     I +EI+ +F  LY  PP ES
Subjt:  KIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLY--PPQES

RVW77758.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]2.7e-1242.86Show/hide
Query:  KIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLY--PPQESPKPFVEGLIGAPSQK
        K E   ++ +E I W+Q  K+KW ++ DC+S  FH+VA+ RR+KN I  +EN  G+++     I EEI+ +F  LY  PP+ES +  VEG+IG   QK
Subjt:  KIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLY--PPQESPKPFVEGLIGAPSQK

RVX20162.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.7e-1243Show/hide
Query:  KIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLY--PPQESPKPFVEGLIGAPSQKGR
        K E   ++ +E I WRQ  KVKW +D DC+S  FH+VA++RR++N I  +EN  G++L     I EEI+ +F  LY  PP ES    VEG+  +P  + R
Subjt:  KIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLY--PPQESPKPFVEGLIGAPSQKGR

TYK03178.1 hypothetical protein E5676_scaffold11G00830 [Cucumis melo var. makuwa]3.2e-1341.05Show/hide
Query:  SLKIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLYPPQESPKPFVEGLIGAP
        S K + A ++ KE +SW Q +K+KW ++ DC+++FFHR A+DRR+KN +G +  + G       EI+EEI+  FSN Y  +   KP +EG+  +P
Subjt:  SLKIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLYPPQESPKPFVEGLIGAP

TrEMBL top hitse value%identityAlignment
A0A438F0I1 Transposon TX1 uncharacterized 149 kDa protein1.3e-1248.19Show/hide
Query:  KIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLY--PPQES
        K E   ++ +E I WRQT KVKW +D DC+ST FH+VA+ RR+KN I  +EN  G++L     I +EI+ +F  LY  PP ES
Subjt:  KIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLY--PPQES

A0A438GZW0 LINE-1 retrotransposable element ORF2 protein1.3e-1242.86Show/hide
Query:  KIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLY--PPQESPKPFVEGLIGAPSQK
        K E   ++ +E I W+Q  K+KW ++ DC+S  FH+VA+ RR+KN I  +EN  G+++     I EEI+ +F  LY  PP+ES +  VEG+IG   QK
Subjt:  KIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLY--PPQESPKPFVEGLIGAPSQK

A0A438KG26 Transposon TX1 uncharacterized 149 kDa protein1.3e-1243Show/hide
Query:  KIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLY--PPQESPKPFVEGLIGAPSQKGR
        K E   ++ +E I WRQ  KVKW +D DC+S  FH+VA++RR++N I  +EN  G++L     I EEI+ +F  LY  PP ES    VEG+  +P  + R
Subjt:  KIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLY--PPQESPKPFVEGLIGAPSQKGR

A0A5D3BW32 Uncharacterized protein1.5e-1341.05Show/hide
Query:  SLKIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLYPPQESPKPFVEGLIGAP
        S K + A ++ KE +SW Q +K+KW ++ DC+++FFHR A+DRR+KN +G +  + G       EI+EEI+  FSN Y  +   KP +EG+  +P
Subjt:  SLKIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLYPPQESPKPFVEGLIGAP

A5ASK8 Uncharacterized protein1.5e-1344.09Show/hide
Query:  KIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLYPPQESPKPFVEGLIGAP
        K E   ++ +E I WRQT KVKW +D DC+ST FH+VA+ RR+KN I  +EN  G++L     I +EI+ +F  LYP        VEG+  +P
Subjt:  KIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLYPPQESPKPFVEGLIGAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein3.4e-0529.51Show/hide
Query:  WRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNL
        +RQ +++KW +D D ++ FFH+V    ++KN+I  +  +  V +    +++E IV+++++L
Subjt:  WRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAATCTTAAGACAGAATGACTCTCTCAAAATTGAGTTTGCTAGAGTGGTTGAAAAAGAGACTATCAGTTGGAGGCAAACGACAAAAGTTAAATGGGCCAGGGATGA
CGATTGTAGTTCGACCTTCTTTCATAGAGTGGCCAGTGACAGACGAAGTAAGAACATGATTGGCCCTATAGAGAACAACATGGGGGTGTTACTCCATCAGGAGAATGAGA
TTGAGGAGGAGATTGTTTCTTTCTTTTCAAATCTTTATCCTCCTCAGGAGTCGCCTAAGCCTTTCGTAGAAGGATTGATTGGAGCCCCATCTCAAAAAGGGAGAAAAATG
AGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAATCTTAAGACAGAATGACTCTCTCAAAATTGAGTTTGCTAGAGTGGTTGAAAAAGAGACTATCAGTTGGAGGCAAACGACAAAAGTTAAATGGGCCAGGGATGA
CGATTGTAGTTCGACCTTCTTTCATAGAGTGGCCAGTGACAGACGAAGTAAGAACATGATTGGCCCTATAGAGAACAACATGGGGGTGTTACTCCATCAGGAGAATGAGA
TTGAGGAGGAGATTGTTTCTTTCTTTTCAAATCTTTATCCTCCTCAGGAGTCGCCTAAGCCTTTCGTAGAAGGATTGATTGGAGCCCCATCTCAAAAAGGGAGAAAAATG
AGTTAG
Protein sequenceShow/hide protein sequence
MRILRQNDSLKIEFARVVEKETISWRQTTKVKWARDDDCSSTFFHRVASDRRSKNMIGPIENNMGVLLHQENEIEEEIVSFFSNLYPPQESPKPFVEGLIGAPSQKGRKM
S